FFCP PHASE1:Hg19::chr20:55043676..55043751,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15890 | |||
|TSSclassifier=strong | |||
|UniProt=A8MSH5,A2A2L5 | |||
|association_with_transcript=0bp_to_ENST00000357348,ENST00000435342,ENST00000449062,ENST00000466260,ENST00000484084,ENST00000487211_5end | |||
|cluster_id=chr20:55043676..55043751,+ | |||
|description=CAGE_peak_1_at_C20orf43_5end | |||
|id=chr20:55043676..55043751,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.85e-14!42;CL:0000860!4.36e-14!45;CL:0000766!4.69e-14!76;CL:0000839!9.98e-12!70;CL:0000557!5.21e-11!71;CL:0000048!6.24e-11!430;CL:0002009!8.81e-10!65;CL:0000723!8.96e-10!436;CL:0000763!1.99e-09!112;CL:0000049!1.99e-09!112;CL:0002194!6.34e-09!63;CL:0000576!6.34e-09!63;CL:0000040!6.34e-09!63;CL:0000559!6.34e-09!63;CL:0000034!8.71e-09!444;CL:0000134!6.75e-08!358;CL:0002320!6.95e-08!365;CL:0002620!7.06e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.35e-14;33!CL:0002057;7.35e-14;33!CL:0000473;6.49e-11;39!CL:0000234;6.49e-11;39!CL:0000576;2.42e-07;48!CL:0000766;2.57e-07;69!CL:0002620;7.74e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.85e-14,42;CL:0002057,3.85e-14,42;CL:0000766,4.75e-14,72;CL:0000473,1.32e-13,48;CL:0000234,1.32e-13,48;CL:0000839,1.08e-11,66;CL:0000557,5.91e-11,67;CL:0000048,2.45e-10,427;CL:0002009,1.01e-09,61;CL:0000763,2.89e-09,108;CL:0000049,2.89e-09,108;CL:0000723,3.24e-09,433;CL:0002194,7.51e-09,59;CL:0000576,7.51e-09,59;CL:0000040,7.51e-09,59;CL:0000559,7.51e-09,59;CL:0000034,2.92e-08,441;CL:0000134,1.62e-07,354;CL:0002320,1.68e-07,361;CL:0002620,7.06e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.62e-11!167;UBERON:0002371!1.30e-10!80;UBERON:0002390!6.50e-10!102;UBERON:0003061!6.50e-10!102;UBERON:0002193!2.26e-09!112;UBERON:0001474!3.00e-09!86;UBERON:0004765!3.64e-09!101;UBERON:0001434!3.64e-09!101;UBERON:0003081!1.40e-08!216;UBERON:0002405!1.23e-07!115;UBERON:0002384!5.92e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.52e-11,203;UBERON:0002204,1.29e-10,167;UBERON:0002371,1.61e-10,76;UBERON:0002390,9.14e-10,98;UBERON:0003061,9.14e-10,98;UBERON:0004765,1.83e-09,90;UBERON:0002193,3.29e-09,108;UBERON:0001474,4.04e-09,82;UBERON:0000926,8.23e-09,315;UBERON:0004120,8.23e-09,315;UBERON:0006603,8.23e-09,315;UBERON:0002405,8.75e-09,93;UBERON:0001434,1.21e-08,100 | |||
|phase1_expression=63.7691111239654,48.3867183993622,54.5493543851408,73.0535077977852,50.0596425758562,63.6807122593269,58.2589719787114,65.6988668363904,51.1923831271683,50.1297230463078,46.0548770861802,58.5422877308862,45.367920255294,73.7647463641878,63.2968987640319,72.6111158167917,75.9395105310211,77.4128695810616,62.9433310439754,71.5333347426138,69.7682364055345,43.2567515639761,58.1059053876045,45.3054346991247,40.1736446703369,52.8780767775823,54.1042884475143,54.9401253569481,91.6538765057946,66.0186564727206,62.7005299430108,45.9710612239464,51.5062121110808,50.2865453826831,41.599886711622,50.8965852304969,64.2984962143315,63.155476572634,50.7377452099458,44.2702176260338,45.6787567449446,48.260156236828,53.5757180679108,70.0819510917502,68.0176698639857,66.9532008878373,80.4204467693669,84.2894170444743,96.0089749774821,103.569261235974,82.7399082088995,109.964236898192,87.9101485878377,73.5852539285562,82.6101568225485,80.002994305607,82.6905634675273,99.1030566402823,92.7434193883835,99.8089274206651,93.34322036666,66.3001113375299,63.0305158084357,65.2123868315022,98.38093189509,85.6751689283621,92.8005151003407,79.8970755516444,84.4802327840726,107.725666973738,85.361329871305,107.168792072381,100.951501593642,75.4181372133632,66.5451458890586,77.9930161291158,72.5642957206358,76.1396846706437,78.9162630682663,61.5627526481097,59.2771698053289,60.6444990498585,47.5189860045571,52.9754452924268,38.2488979161329,52.9145475982469,56.8562301591138,50.00346227604,52.2225449500041,71.5540315901523,31.8759262701291,29.3618594685469,29.8173117937679,62.1205244321422,89.1208615140642,62.4220280916933,39.1452442526528,27.9037641551907,28.3730068619323,60.5215113314255,51.8216403947409,53.4996020480249,46.7584148178987,108.402374549274,47.4315511034488,46.7436517571441,54.7023804805332,48.2904275365795,55.9255194507476,53.6067569007984,61.3497039484583,71.0017560050879,50.1208583487764,43.3416141505335,51.2224066644386,70.9316485286764,43.687136270619,51.8877442678771,61.4837851607392,49.377639220235,39.0650072313851,51.3244104002122,59.627747154798,67.1929708560696,59.966748745126,46.8818959047153,42.6986558398944,35.6843935507776,33.9649048645054,34.9026813357546,24.3806866313962,67.7407868300673,74.4160109929346,56.3845077719923,58.1551976337632,58.0834541032903,92.2531698579275,50.6100265114741,41.6898543693539,43.2372325052,38.5594709192823,61.8221236349204,41.8939581536424,40.0447198207184,29.8583602162309,44.0548235367146,49.8592351945744,66.3003935568851,83.5112569738987,89.8927153217547,64.001495172079,66.2380638231716,61.4438687845442,52.5736385989329,62.505415995276,48.971011465332,58.518590630307,62.0200222006389,56.5668357671869,52.5511362040532,62.8413734690269,79.0682989947253,47.8361632794412,70.9589745067527,56.7099363517232,53.0440386007434,49.3964619777574,47.9724906858953,50.5944903637415,53.1588769358152,53.8613127155397,311.001785149109,399.413672072775,38.8123706406856,48.2062793144459,70.4065644855064,53.0960815061007,49.0490621480471,53.9095940941503,67.2813120170769,59.7794376086348,42.1801507793343,45.1256001329661,52.8065834513177,54.4328137367818,61.753830479132,39.7561387891199,50.8477507079339,64.6171359038763,75.3022804438673,53.9509736792002,45.9168889697121,46.9431538667581,53.2308557401522,67.9833390278795,61.7856616078193,39.9870773150212,58.2121400068206,50.195186643547,55.5198430782196,34.4936708071794,65.3144122141777,36.4094892827416,47.6550278632795,68.0415312365299,83.3646804573333,45.071417671979,65.3369375001721,69.6031786472784,81.3653651398742,117.410273242397,80.1243226545354,162.719943667495,77.5498025537344,111.111763229959,61.6033612680622,114.391044059247,74.972830950502,95.3636949934221,126.730508545949,71.0019185033229,116.167169256469,101.058113017051,41.5510834301088,49.0943017063502,41.5866663314056,25.614478287215,27.6987215791904,26.8408008028587,30.3726891195035,30.0261812541998,26.2783698534598,82.9182521348025,66.2538166338672,78.7369051709139,75.6919722692126,84.4598993553415,63.1758312212766,58.3303027670232,64.5909560087732,66.9484414485631,60.3526060135965,60.7412784924407,61.8875704455155,68.6775127938711,66.1765109947792,84.8878772818345,23.8411015465858,52.6814734504192,35.2820907325301,30.4212083572394,39.313088667105,43.7184530944239,79.0218947952225,84.6160457176621,66.0536069649323,44.558615875902,44.9607013030478,32.9735029510149,45.1831612373624,66.7907025886166,70.7155653990113,49.0726562885929,68.1670781253452,56.1213558447228,75.7923850745638,64.3549862481489,68.68174895669,90.0833013673574,97.0089363167206,51.2131372661786,64.5851771784296,59.3038337532026,66.5510221306117,71.2244223563164,62.8063680783772,47.0182244189954,46.5014301622339,39.1050332748515,187.704693638354,92.0986619778344,77.7480433277895,104.486966227297,74.3567932881378,59.1165395860094,43.5466805136437,45.7148044119183,58.1646316477198,46.8893366727155,46.2528309079633,56.3078072282239,72.5488115714484,64.5220901873255,51.4834766463069,50.415969145533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| |||
|short_description=p1@C20orf43 | |||
}} |
Latest revision as of 03:16, 17 September 2015
Short description: | p1@C20orf43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C20orf43_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357348, ENST00000435342, ENST00000449062, ENST00000466260, ENST00000484084, ENST00000487211_5end |
EntrezGene: | C20orf43 |
HGNC: | 15890 |
UniProt: | A8MSH5A2A2L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.85e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.85e-14 | 42 |
myeloid leukocyte | 4.75e-14 | 72 |
defensive cell | 1.32e-13 | 48 |
phagocyte | 1.32e-13 | 48 |
myeloid lineage restricted progenitor cell | 1.08e-11 | 66 |
granulocyte monocyte progenitor cell | 5.91e-11 | 67 |
multi fate stem cell | 2.45e-10 | 427 |
macrophage dendritic cell progenitor | 1.01e-09 | 61 |
myeloid cell | 2.89e-09 | 108 |
common myeloid progenitor | 2.89e-09 | 108 |
somatic stem cell | 3.24e-09 | 433 |
monopoietic cell | 7.51e-09 | 59 |
monocyte | 7.51e-09 | 59 |
monoblast | 7.51e-09 | 59 |
promonocyte | 7.51e-09 | 59 |
stem cell | 2.92e-08 | 441 |
mesenchymal cell | 1.62e-07 | 354 |
connective tissue cell | 1.68e-07 | 361 |
skin fibroblast | 7.06e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.52e-11 | 203 |
musculoskeletal system | 1.29e-10 | 167 |
bone marrow | 1.61e-10 | 76 |
hematopoietic system | 9.14e-10 | 98 |
blood island | 9.14e-10 | 98 |
skeletal element | 1.83e-09 | 90 |
hemolymphoid system | 3.29e-09 | 108 |
bone element | 4.04e-09 | 82 |
mesoderm | 8.23e-09 | 315 |
mesoderm-derived structure | 8.23e-09 | 315 |
presumptive mesoderm | 8.23e-09 | 315 |
immune system | 8.75e-09 | 93 |
skeletal system | 1.21e-08 | 100 |