FFCP PHASE1:Hg19::chr8:16424975..16425011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4481 | |EntrezGene=4481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7376 | |HGNC=7376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522130_5end | |association_with_transcript=0bp_to_ENST00000522130_5end | ||
|cluster_id=chr8:16424975..16425011,- | |||
|coexpression_cluster_id=C1515 | |||
|description=CAGE_peak_3_at_MSR1_5end | |description=CAGE_peak_3_at_MSR1_5end | ||
|id=chr8:16424975..16425011,- | |id=chr8:16424975..16425011,- | ||
|ontology_enrichment_celltype=CL:0002139!8.30e-56!24;CL:0000115!1.47e-43!35;CL:0000071!5.46e-39!18;CL:0002546!5.46e-39!18;CL:0002078!3.30e-33!44;CL:0000213!4.68e-24!57;CL:0000215!4.68e-24!57;CL:1000413!2.90e-20!9;CL:0005020!1.86e-18!6;CL:0002138!1.86e-18!6;CL:0005022!1.86e-18!6;CL:0000222!2.53e-14!119;CL:0002544!2.87e-12!6;CL:0000076!3.39e-12!62;CL:0002543!4.81e-12!6;CL:0002144!3.19e-10!3;CL:0002618!3.27e-09!3;CL:0002545!4.89e-07!2 | |ontology_enrichment_celltype=CL:0002139!8.30e-56!24;CL:0000115!1.47e-43!35;CL:0000071!5.46e-39!18;CL:0002546!5.46e-39!18;CL:0002078!3.30e-33!44;CL:0000213!4.68e-24!57;CL:0000215!4.68e-24!57;CL:1000413!2.90e-20!9;CL:0005020!1.86e-18!6;CL:0002138!1.86e-18!6;CL:0005022!1.86e-18!6;CL:0000222!2.53e-14!119;CL:0002544!2.87e-12!6;CL:0000076!3.39e-12!62;CL:0002543!4.81e-12!6;CL:0002144!3.19e-10!3;CL:0002618!3.27e-09!3;CL:0002545!4.89e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.57e-77;24!CL:0000115;3.88e-58;36!CL:0000071;2.26e-45;18!CL:0002078;2.37e-38;45!CL:0002138;1.44e-35;6!CL:0000213;1.08e-24;58!CL:0000215;1.08e-24;58!CL:1000413;3.68e-23;9!CL:0002144;4.02e-19;3!CL:0002188;7.26e-11;5!CL:0002543;1.61e-09;6!CL:0002544;2.18e-09;6!CL:0002573;2.27e-09;2!CL:0000076;2.84e-08;63!CL:1000746;6.72e-08;7!CL:1000612;6.72e-08;7!CL:0000222;4.88e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.01e-77,24;CL:0000115,3.30e-68,36;CL:0002078,1.07e-53,45;CL:0000071,2.36e-45,18;CL:0002546,2.36e-45,18;CL:0000213,1.10e-40,58;CL:0000215,1.10e-40,58;CL:0005020,7.25e-36,6;CL:0002138,7.25e-36,6;CL:0005022,7.25e-36,6;CL:1000413,2.92e-23,9;CL:0000222,4.71e-21,121;CL:0002144,4.15e-19,3;CL:0000076,2.26e-13,63;CL:0002188,9.90e-11,5;CL:0002321,1.22e-09,250;CL:0002544,1.78e-09,6;CL:0002543,1.95e-09,6;CL:0002573,2.32e-09,2;CL:1000746,8.36e-08,7;CL:1000612,8.36e-08,7;CL:0000066,1.23e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.26e-45;18!CL:0005022;1.44e-35;6!UBERON:0006215;5.28e-19;3!CL:0000222;5.69e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.88e-07;1!DOID:3165;4.88e-07;1!DOID:0060121;4.88e-07;1!DOID:2438;4.88e-07;1!DOID:4418;4.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.89e-07,1;DOID:3165,4.89e-07,1;DOID:0060121,4.89e-07,1;DOID:2438,4.89e-07,1;DOID:4418,4.89e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.46e-39!18;UBERON:0004638!5.46e-39!18;UBERON:0004852!5.46e-39!18;UBERON:0000487!4.34e-31!22;UBERON:0006914!7.93e-27!25;UBERON:0000055!4.34e-26!69;UBERON:0002049!8.58e-22!79;UBERON:0007798!8.58e-22!79;UBERON:0003915!2.90e-20!9;UBERON:0004700!2.90e-20!9;UBERON:0001917!2.90e-20!9;UBERON:0001981!1.10e-17!60;UBERON:0007500!1.10e-17!60;UBERON:0004537!1.10e-17!60;UBERON:0006965!1.10e-17!60;UBERON:0004111!4.85e-16!241;UBERON:0000477!5.31e-14!286;UBERON:0001473!1.24e-13!8;UBERON:0004536!1.24e-13!8;UBERON:0006558!1.24e-13!8;UBERON:0004535!1.61e-13!110;UBERON:0001009!5.75e-13!113;UBERON:0000025!3.44e-11!194;UBERON:0004872!5.47e-11!84;UBERON:0001638!6.18e-11!9;UBERON:0003920!6.18e-11!9;UBERON:0004582!6.18e-11!9;UBERON:0002465!9.81e-11!10;UBERON:0004733!1.16e-10!12;UBERON:0002028!1.16e-10!12;UBERON:0007277!1.16e-10!12;UBERON:0003914!1.22e-10!118;UBERON:0001915!3.19e-10!3;UBERON:0001982!3.19e-10!3;UBERON:0004732!9.30e-10!13;UBERON:0001637!1.16e-08!42;UBERON:0003509!1.16e-08!42;UBERON:0004572!1.16e-08!42;UBERON:0003076!2.58e-08!15;UBERON:0003057!2.58e-08!15;UBERON:0000490!5.41e-08!138;UBERON:0002680!6.47e-08!9;UBERON:0001895!6.47e-08!9;UBERON:0010092!6.47e-08!9;UBERON:0005800!4.89e-07!2;UBERON:0001515!4.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.26e-45;18!UBERON:0001986;2.26e-45;18!UBERON:0004852;2.26e-45;18!UBERON:0000487;1.05e-36;22!UBERON:0006914;5.08e-32;25!UBERON:0001473;1.45e-26;8!UBERON:0004536;1.45e-26;8!UBERON:0006558;1.45e-26;8!UBERON:0003915;3.68e-23;9!UBERON:0004700;3.68e-23;9!UBERON:0001917;3.68e-23;9!UBERON:0000490;1.07e-21;33!UBERON:0002465;3.72e-21;10!UBERON:0010523;4.02e-19;3!UBERON:0001915;4.02e-19;3!UBERON:0001982;4.02e-19;3!UBERON:0000055;1.95e-17;65!UBERON:0002049;2.92e-13;75!UBERON:0007798;2.92e-13;75!UBERON:0002405;5.61e-10;27!UBERON:0007500;6.59e-10;56!UBERON:0001981;6.59e-10;56!UBERON:0004537;6.59e-10;56!UBERON:0002037;9.34e-10;6!UBERON:0003914;5.10e-09;74!UBERON:0000074;6.72e-08;7!UBERON:0001229;6.72e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.36e-45,18;UBERON:0001986,2.36e-45,18;UBERON:0004852,2.36e-45,18;UBERON:0000487,1.09e-36,22;UBERON:0006914,5.24e-32,25;UBERON:0000055,1.22e-27,68;UBERON:0001473,8.70e-27,8;UBERON:0004536,8.70e-27,8;UBERON:0006558,8.70e-27,8;UBERON:0002049,1.40e-23,78;UBERON:0007798,1.40e-23,78;UBERON:0003915,2.92e-23,9;UBERON:0004700,2.92e-23,9;UBERON:0001917,2.92e-23,9;UBERON:0002465,2.48e-21,10;UBERON:0010523,4.15e-19,3;UBERON:0001915,4.15e-19,3;UBERON:0001982,4.15e-19,3;UBERON:0004535,9.95e-16,109;UBERON:0001009,3.36e-15,112;UBERON:0007500,2.16e-14,59;UBERON:0001981,2.16e-14,59;UBERON:0004537,2.16e-14,59;UBERON:0006965,2.16e-14,59;UBERON:0004111,1.97e-11,240;UBERON:0002037,9.35e-10,6;UBERON:0006215,9.35e-10,6;UBERON:0003914,1.61e-09,117;UBERON:0004872,1.72e-09,83;UBERON:0000025,4.87e-08,192;UBERON:0010532,8.36e-08,7;UBERON:0000074,8.36e-08,7;UBERON:0001229,8.36e-08,7;UBERON:0001230,8.36e-08,7;UBERON:0003220,8.36e-08,7;UBERON:0005749,8.36e-08,7;UBERON:0004199,8.36e-08,7;UBERON:0004209,8.36e-08,7;UBERON:0004198,8.36e-08,7;UBERON:0005103,6.94e-07,8;UBERON:0000083,6.94e-07,8;UBERON:0009201,6.94e-07,8;UBERON:0006553,6.94e-07,8;UBERON:0003074,6.94e-07,8;UBERON:0003060,6.94e-07,8 | |||
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|short_description=p3@MSR1 | |short_description=p3@MSR1 | ||
}} | }} |
Latest revision as of 03:29, 17 September 2015
Short description: | p3@MSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSR1_5end |
Coexpression cluster: | C1515_Endothelial_schwannoma_Renal_cerebellum_lung_heart_diaphragm |
Association with transcript: | 0bp_to_ENST00000522130_5end |
EntrezGene: | MSR1 |
HGNC: | 7376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.01e-77 | 24 |
endothelial cell | 3.30e-68 | 36 |
meso-epithelial cell | 1.07e-53 | 45 |
blood vessel endothelial cell | 2.36e-45 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-45 | 18 |
lining cell | 1.10e-40 | 58 |
barrier cell | 1.10e-40 | 58 |
lymphangioblast | 7.25e-36 | 6 |
endothelial cell of lymphatic vessel | 7.25e-36 | 6 |
vascular lymphangioblast | 7.25e-36 | 6 |
endothelial cell of artery | 2.92e-23 | 9 |
mesodermal cell | 4.71e-21 | 121 |
capillary endothelial cell | 4.15e-19 | 3 |
squamous epithelial cell | 2.26e-13 | 63 |
glomerular endothelial cell | 9.90e-11 | 5 |
embryonic cell | 1.22e-09 | 250 |
aortic endothelial cell | 1.78e-09 | 6 |
vein endothelial cell | 1.95e-09 | 6 |
Schwann cell | 2.32e-09 | 2 |
glomerular cell | 8.36e-08 | 7 |
kidney corpuscule cell | 8.36e-08 | 7 |
epithelial cell | 1.23e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.89e-07 | 1 |
skin benign neoplasm | 4.89e-07 | 1 |
integumentary system benign neoplasm | 4.89e-07 | 1 |
dermis tumor | 4.89e-07 | 1 |
cutaneous fibrous histiocytoma | 4.89e-07 | 1 |