FFCP PHASE1:Hg19::chr12:125348399..125348419,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:125348399..125348419,- to FFCP PHASE1:Hg19::chr12:125348399..125348419,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=949 | |EntrezGene=949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1664 | |HGNC=1664 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5E8 | |UniProt=F5H5E8 | ||
|association_with_transcript=0bp_to_ENST00000538291,ENST00000545493_5end | |||
|cluster_id=chr12:125348399..125348419,- | |||
|coexpression_cluster_id=C3250 | |||
|description=CAGE_peak_1_at_SCARB1_5end | |||
|id=chr12:125348399..125348419,- | |||
|ontology_enrichment_celltype=CL:0000066!8.07e-26!254;CL:0000220!1.95e-10!246;CL:0002321!4.57e-10!248;CL:0000223!4.95e-08!59;CL:0000213!1.85e-07!57;CL:0000215!1.85e-07!57;CL:0000115!4.81e-07!35 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.00e-26,253;CL:0002321,3.05e-10,250;CL:0000223,2.09e-08,58;CL:0000213,8.98e-08,58;CL:0000215,8.98e-08,58;CL:0000115,2.16e-07,36;CL:0002078,6.05e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.17e-07!106;DOID:162!2.46e-07!235;DOID:14566!7.56e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-07,106;DOID:162,2.74e-07,235;DOID:14566,8.40e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000119!5.35e-15!312;UBERON:0000481!9.79e-15!347;UBERON:0000483!3.67e-14!309;UBERON:0004921!1.29e-12!129;UBERON:0004185!1.29e-12!129;UBERON:0004119!1.49e-12!169;UBERON:0000925!1.49e-12!169;UBERON:0006595!1.49e-12!169;UBERON:0000477!4.29e-12!286;UBERON:0001007!9.57e-12!155;UBERON:0001555!9.57e-12!155;UBERON:0007026!9.57e-12!155;UBERON:0005177!2.87e-11!107;UBERON:0005172!1.71e-10!55;UBERON:0005173!1.71e-10!55;UBERON:0003104!7.52e-10!238;UBERON:0009142!7.52e-10!238;UBERON:0009569!1.47e-09!113;UBERON:0002417!2.21e-09!61;UBERON:0000916!2.21e-09!61;UBERON:0000077!2.41e-09!130;UBERON:0004111!5.38e-09!241;UBERON:0000475!5.83e-09!365;UBERON:0001048!6.54e-09!168;UBERON:0001041!6.96e-09!98;UBERON:0000063!1.79e-08!97;UBERON:0000466!2.23e-08!126;UBERON:0002365!2.59e-08!31;UBERON:0002330!2.59e-08!31;UBERON:0002107!3.08e-08!19;UBERON:0006925!3.08e-08!19;UBERON:0008836!3.08e-08!19;UBERON:0002100!4.85e-08!216;UBERON:0009497!5.53e-08!25;UBERON:0000015!5.53e-08!25;UBERON:0002423!5.53e-08!25;UBERON:0006235!5.53e-08!25;UBERON:0004161!5.53e-08!25;UBERON:0000064!1.06e-07!219;UBERON:0008835!1.23e-07!22;UBERON:0003894!1.23e-07!22;UBERON:0005911!1.32e-07!82;UBERON:0009854!1.58e-07!23;UBERON:0000490!5.21e-07!138;UBERON:0000025!5.54e-07!194;UBERON:0007499!7.09e-07!25;UBERON:0009856!8.29e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.91e-08;19!UBERON:0006925;2.91e-08;19!UBERON:0002365;3.55e-08;31!UBERON:0002330;3.55e-08;31!UBERON:0002423;5.28e-08;25!UBERON:0005172;1.30e-07;52!UBERON:0005173;1.30e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.65e-14,309;UBERON:0004921,2.38e-13,118;UBERON:0000483,3.62e-13,306;UBERON:0004119,1.11e-12,160;UBERON:0000925,1.11e-12,160;UBERON:0006595,1.11e-12,160;UBERON:0001007,5.72e-12,145;UBERON:0001555,5.72e-12,145;UBERON:0007026,5.72e-12,145;UBERON:0005177,3.16e-11,101;UBERON:0005172,1.06e-10,54;UBERON:0005173,1.06e-10,54;UBERON:0011216,7.43e-10,223;UBERON:0009569,7.55e-10,112;UBERON:0001041,1.38e-09,87;UBERON:0002417,1.50e-09,60;UBERON:0000916,1.50e-09,60;UBERON:0001048,7.31e-09,160;UBERON:0004111,1.48e-08,240;UBERON:0002365,2.58e-08,31;UBERON:0002330,2.58e-08,31;UBERON:0002107,3.07e-08,19;UBERON:0006925,3.07e-08,19;UBERON:0008836,3.07e-08,19;UBERON:0002100,3.33e-08,199;UBERON:0009497,5.51e-08,25;UBERON:0000015,5.51e-08,25;UBERON:0002423,5.51e-08,25;UBERON:0006235,5.51e-08,25;UBERON:0004161,5.51e-08,25;UBERON:0008835,1.22e-07,22;UBERON:0003894,1.22e-07,22;UBERON:0005911,1.34e-07,82;UBERON:0009854,1.57e-07,23;UBERON:0007499,7.07e-07,25;UBERON:0009856,8.27e-07,26;UBERON:0000025,9.56e-07,192 | |||
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| ||
|short_description=p1@SCARB1 | |||
}} | }} |
Latest revision as of 04:36, 17 September 2015
Short description: | p1@SCARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARB1_5end |
Coexpression cluster: | C3250_liver_Hepatocyte_Melanocyte_Monocytederived_placenta_Meningeal_Pericytes |
Association with transcript: | 0bp_to_ENST00000538291, ENST00000545493_5end |
EntrezGene: | SCARB1 |
HGNC: | 1664 |
UniProt: | F5H5E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.00e-26 | 253 |
embryonic cell | 3.05e-10 | 250 |
endodermal cell | 2.09e-08 | 58 |
lining cell | 8.98e-08 | 58 |
barrier cell | 8.98e-08 | 58 |
endothelial cell | 2.16e-07 | 36 |
meso-epithelial cell | 6.05e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-07 | 106 |
cancer | 2.74e-07 | 235 |
disease of cellular proliferation | 8.40e-07 | 239 |