FFCP PHASE1:Hg19::chr9:34126606..34126617,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19911 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T6F0 | |||
|association_with_transcript=153bp_to_ENST00000361264,NM_015397,uc003ztt.2_5end | |||
|cluster_id=chr9:34126606..34126617,- | |||
|description=CAGE_peak_4_at_DCAF12_5end | |||
|id=chr9:34126606..34126617,- | |||
|ontology_enrichment_celltype=CL:0000763!3.15e-17!112;CL:0000049!3.15e-17!112;CL:0000557!1.49e-16!71;CL:0000766!7.44e-16!76;CL:0000839!1.13e-15!70;CL:0000037!7.11e-15!172;CL:0000566!7.11e-15!172;CL:0002009!7.31e-15!65;CL:0000988!1.12e-14!182;CL:0002194!1.98e-14!63;CL:0000576!1.98e-14!63;CL:0000040!1.98e-14!63;CL:0000559!1.98e-14!63;CL:0002032!3.03e-13!165;CL:0000837!3.03e-13!165;CL:0000738!1.66e-11!140;CL:0002031!1.32e-10!124;CL:0002087!5.33e-10!119;CL:0002057!5.65e-10!42;CL:0000860!5.23e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000766;4.99e-10;69!CL:0000576;4.24e-09;48!CL:0000763;6.23e-09;100!CL:0000473;4.21e-08;39!CL:0000234;4.21e-08;39!CL:0000115;5.80e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.56e-25,108;CL:0000049,3.56e-25,108;CL:0000766,1.70e-23,72;CL:0000557,9.38e-23,67;CL:0000839,3.56e-22,66;CL:0000037,1.95e-20,168;CL:0000988,1.86e-19,177;CL:0002009,3.04e-19,61;CL:0002194,3.16e-19,59;CL:0000576,3.16e-19,59;CL:0000040,3.16e-19,59;CL:0000559,3.16e-19,59;CL:0002032,2.04e-18,161;CL:0000837,2.04e-18,161;CL:0000738,9.64e-16,136;CL:0002031,1.63e-13,120;CL:0000473,2.24e-12,48;CL:0000234,2.24e-12,48;CL:0002087,4.91e-12,115;CL:0000860,4.58e-09,42;CL:0002057,4.58e-09,42;CL:0000115,5.57e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000049;5.20e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.60e-07!51;DOID:0060083!1.60e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.62e-08,31;DOID:2531,1.48e-07,51;DOID:0060083,1.48e-07,51;DOID:1240,2.88e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.38e-22!112;UBERON:0002390!1.99e-20!102;UBERON:0003061!1.99e-20!102;UBERON:0002405!2.26e-15!115;UBERON:0002371!1.43e-14!80;UBERON:0001474!3.25e-12!86;UBERON:0003081!4.24e-11!216;UBERON:0004765!4.04e-09!101;UBERON:0001434!4.04e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-08;15!UBERON:0000179;1.64e-08;15!UBERON:0000463;1.64e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.12e-29,108;UBERON:0002390,2.26e-27,98;UBERON:0003061,2.26e-27,98;UBERON:0002405,6.77e-22,93;UBERON:0002371,2.96e-20,76;UBERON:0003081,3.41e-18,203;UBERON:0001474,1.29e-17,82;UBERON:0004765,1.31e-15,90;UBERON:0001434,4.89e-14,100;UBERON:0000926,1.08e-08,315;UBERON:0004120,1.08e-08,315;UBERON:0006603,1.08e-08,315;UBERON:0000178,1.26e-08,15;UBERON:0000179,1.26e-08,15;UBERON:0000463,1.26e-08,15 | |||
|phase1_expression=1.2717486548939,0.642301571672949,1.9733616573436,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,0,0,0.655324116390517,0.263766978228454,0.74259811776028,0.331397375727916,0.672325146451775,0,0,0,0.984968464614303,0.408001382488506,0.313454721478088,0.286235987131057,0.684372125364421,0.87879847716362,0.916960868975415,0.903106483949403,1.49550484495991,1.18009283054671,0.383829398097213,1.08371286321253,0,1.204823675113,0.369754010166788,3.48602402611357,1.13735385989937,2.05520307534393,0.553995408531877,1.20326668482085,0.868043482863407,8.2848725468772,5.50619232232265,6.18181362322048,4.65274364094607,2.26725566213286,2.91100873425379,1.85943229524548,0.822335776043652,0,2.8769239232215,2.30544635876191,0.709446689665756,0.344745680736619,0.645484683583826,2.70852973188684,2.07066573496865,0.818718450173537,0.898893937780338,2.14258724659632,0.962787081228281,0,4.61791820261403,2.39356389145958,1.70489900213078,1.16083695451434,0,0.622822248995575,1.7587406567972,0.521482918420201,0.868755378820466,0.605399502633369,0.736555271975129,0.632924774881769,1.90129757680748,4.25208599930087,2.09658645508376,4.83013113929929,2.4028302854641,3.85741408072992,1.99508920618874,1.9891667719909,1.46131323011707,0,0,0,1.28019066769952,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,1.58030450865046,0.393419540227666,0,0.411202997999018,1.00311897234407,0,0,0,0.334231370655521,0.294605907474837,1.32920336750173,0,2.0494611156108,1.30059347559878,1.97325485524411,1.10540007114339,0.869409257205157,0.296573126324121,0,1.04535523804977,0.453237370790265,0.383220493601921,0.34362744548263,0,1.27426165729639,0,0,0.301150238155546,0.511946444617674,1.24930726552346,0.710331756132051,1.64225599384209,0.403213486449465,0.267440195783507,0,0,2.01210257911091,0.895037932904712,0.361439152384566,0,0,3.1811437882044,0,0.756278537312543,0.221729397462564,0.87834785693126,0.851363990735132,0,0.370784442784429,1.29818957461873,2.43781632218974,1.19662164466979,3.33886874027479,1.71598473234038,0.371457501329565,1.39133685156694,0,1.38856200643038,2.82653970962005,1.25849830862972,1.10047216776027,0.835979866147242,1.29208379584664,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,2.4406205754817,1.10298924103761,0.81014194788176,1.60739510911344,2.2452937262617,1.12611480483322,1.53316637465883,0,1.64881569537367,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0.817309515567294,0.302714855289863,0.576175924479999,1.40592859100278,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.421352420106746,0.204154171254893,0.61417158655884,0.103325781175765,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.750711119231785,0,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.515262646192195,0.257640540045629,0,0.506328996723799,0.194874010322397,0,0,0.323292113637624,0.710019185033229,0.503760491138201,0,0.57978255948989,0,2.00763216772303,0.609868530647977,0.132529768321485,0.116193942869518,0.518305275076852,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0,0,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0.982827216677626,0.590789906681404,1.7658523976586,0.122988438543114,0.686271241194102,0.329250856225877,0,0.301586917234893,0.555530670951178,0,0,0,0.231860809950154,0.234817388471643,0.721832238805369,3.24089858803628,1.33177906564219,2.37061319387782,0.858486162094873,5.17055712783534,2.57404691653161,4.7561971932393,0,0,0,0.447792613514241,0,0.766765358330422,2.95597942737566,2.72950145441001,2.48793738648926,2.30591925467138,3.66103056936502,0.761974731506028,1.52795370223311,0,0,0.719792448923265,0.300343057843917,0.285826432630578,0.336393253036082,1.30788020649984,0.66004457238855,0.517086863031111,0,1.690605505112,0,0,0.514414748524284,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.299918973546171,3.64871341923571,4.52031382288914,0,0,0,0,0.289562613335158,0.205476322550383,0.895304816199478,0.224170287987055,0.394061520403854,0.215627574859517,0.513372145118994,0.76228387266739,1.30139853857622,0,0.670065061337395,2.55175500661265,1.49801404789436,0,4.55857064779639,0.24538298343828,2.00068208423871,0.271265023699736,1.03985430765404,0.713715955188647,0.473107245101804,0.234282829985426,0.601892199455438,0,0,1.32845119707087,0.368738337083406,0.260650843404249,0.783204629850962,1.71571711905428,1.44737618286021,1.50999940573032,0.853820462427555,0,0,0,1.73675465473144,0.153461973288062,0.841980283299221,1.02511319404561,0,0.482561763430822,2.96836132889982,0.462629081407967,0,0.657017248110473,0,0.464841513839837,0.241718899183244,0.40101294060657,0.552485933615378,0.803701137152247,0.546273504020151,0.131124414959424,0.451199612907412,0.462092022626489,0.784349769176855,0,0.527758144464379,2.27466768141793,0.680374821106063,0.215915916102139,0,0.812839312631559,1.00337954770971,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,0.325378394664303,0.824328093181778,0.183138929636687,0.247528499761764,1.14853107599234,0,0,0.676695028044854,0.462145851343933,0.307007349452259,0.689182862422653,1.07420244868274,0.580066775656914,0.511359764496605,0.979352392114111,0.165284915360978,0.768760269460425,0.510450849978337,0.809262246844399,0.464845549297286,0.31481234683064,0.6970372701606,0,0.532306030317022,1.73986598415015,0,0.286249773483982,0.744316738719335,0,0,0,0.42793898803392,2.22742273548156,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0,0,0.409499734223957,0.282810863907425,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0.655894752046633,0.202910376962704,0,0.845086807596724,0.573645408816206,0.0982490410131212,0,0,0.844430541190656,1.31717957183961,0.379473173765715,0.349934720244983,0.962221127255121,0,2.17781969722645,0.941438007767792,0.86101074534246,0,0.443430153536676,0.229723400206959,6.08937131078603,6.117097657139,10.8232965563091,6.4322579373603,4.93634727703433,3.24236655596359,3.7802200606668,10.3106272918255,0.747768497892312,0,0,1.11481905075431,1.44269212976445,0.640276590135727,1.27541018183058,1.1974762285969,2.68107518185313,2.54008299268659,0.649243880549111,2.24637742490767,5.47763229679661,1.09675927041116,0,0.677167111206413,2.89058535186659,4.03599414382095,4.68430861459359,4.12206413706918,13.8258343938806,15.6573275524691,14.1821770455122,2.9308214310306,0,1.23087398947712,0.811367035427949,0.99921590399346,0,0,2.63714722689409,0,0.445773537109913,0.284136146806413,0.95497793895076,0.593929361665277,0.614321404198464,0,0.281338832821026,0.333926115068718,1.31843099381408,0.63337622438398,1.19548792950642,2.76283915531148,0.503865495708552,0.306806047506464,0.738508832766417,0.311039587661807,0,0,9.20830266408369,0.789147245095469,7.18449277040819,1.11136990144637,2.90799823828566,0.0927680981618513,3.99227596002388,1.30213880542617,1.04951999995435,2.17499872630438,0,0.254253650292766,0,0.344743373241465,0.583209226766509,0,0,0.482385754501632,0,0.110579259931225,0,0.438770794307945,0.653630781113941,0.139423744278603,1.00035336054936,0.227884111694002,0.46112780877612,0.628303510868405,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0.627921025580099,1.66211681900156,0.225595660617181,0.392125068635479,0.335643173951685,0.948768663620925,1.27149263184303,0,0,0,0.865554558968364,2.98578579323551,0.796118080530053,2.4441205797345,0.889563386041866,0.247127877893006,0.208843899010911,0.337005664903385,1.60515529459758,0.468528891450678,0.547364367646998,0.586993856796269,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,1.64285107034069,0.300646838828985,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0.391969589657511,0.174118413160805,2.09672001890436,0.51595809741485,0.580537987734511,0.219267951258557,0.0821154570532092,0.969890164884194,0.264768380074501,0.451961481561065,0.411125773940253,0,0.189932387867636,0,0.0801588202515337,1.49417096317547,0.39961921916426,0,0.114536596165916,0.343189995723929,0.14405479798815,0.248505071130865,0.471388069233591,0.135904206073614,0.418411385249333,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0.788662062837943,1.11712960508902,0.458320848023367,0.717873024576814,0.998395002494955,0,0.446342914883745,0.604651252380536,0.360299883542404,0,0.472699093843342,0.164831716762333,0.539228350833479,0.196854963029498,0.592713324460491,0,0.408610218334727,0.321506296930038,0.412618309791701,0,1.349843349309,0.77380195455795,0.364497339948148,1.0063040627978,0.788057072991982,0.83927341015997,0.105600336519406,0.35857467866569,0.191915197319445,2.85878130549347,1.98627591109629,0,0.542999601753713,0,0.326587360109409,0,0.328370082997356,0,0.339936274560377,0.439656701034247,5.30027555648885,0.258565912723101,0.26446520348538,0.171086837884329,0.704815022316672,1.38823636338003,1.25763444079733,3.72815149812476,5.45782623993146,0,2.19226677085613,0,0.544017803369474,0.5013797880454,0.612691153526923,1.63936315354902,0,0.886068179966986,0.366078794705889,0.500763722825999,0,0.887432412294818,0.434674820589684,0.276697269872462,0.37494122388632,0.151649117541648,0,0.235265819698172,0.468334905806882,1.01444720027578,0.298509605773748,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0.151230923763239,0.466311601748341,1.03498604992744,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.322231671127465,0.464033759878494,0,0.800055529326307,0,0,0,0.192619830407303,0.428883182749851,0,0,0.231522474323834,0.244736704506468,0.895444205407437,0,0.877136198314828,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0.967809053062115,0,0,0.327130788511688,0,0.245772908753719,0.211312123358627,0.39997479170986,3.52082707990665,0.688859918643263,0.567515953566836,0.368211900503681,0.559518030877778,0,0.76736622782191,0.970423302570136,0.157265941855896,0.327628914576042,0.509197589862076,0.637724760305049,0.371807292777007,0,0,3.70650201505891,0,0.352675943690684,0.6124909547064,0.513833800771676,0,0.638535436228605,0.615349092722265,1.51243017733031,0.345786262321089,0,1.42769420259154,0.196295437002051,0,0.550285795565037,0.231051332300676,0.381382095467167,0,0,0.526472298444801,0.20170506870352,0.781514011233092,0.523813388962845,0.818859587550484,0.443568258651136,0.337687923091973,0,0.206686796501184,0.507326481551255,0.546974809018219,0.548257766857182,0.992422356778588,0,0.127762427639595,0,0.672567444437648,0.606965604236632,0,1.06442844195167,0.115233987555779,1.02892805662451,0.40781839786099,0.460409414939944,0.118193840883968,0,0.941917114206168,0.628462359664008,0.840816489941367,1.82631744101899,0,0,0.285906176706625,0.158013611732727,0.116241425368125,0,0,0.207216164163037,1.19502933965765,0,0,0.118332000730565,0.596493833314104,1.69354820076372,0,0,0,0.111855431797792,0.588901401691458,0.731507549893617,0,1.02662806856247,6.95888658802919,0.971421986118279,0.701818390386317,1.79055697645231,0.356760272332706,0,0.109940516745429,0.150962843566674,0.617393264863557,1.09279780251979,0.940634592723046,0.245148321753905,0.235676547101626,0.785233868459781,0.891139200981258,0.8453114551668,0.339854229375634,1.78569444161722,1.93373663920732,0.89947040332436,0,0.352894871715692,0.641930933513346,0,1.37618785021362,0.860037498908708,1.73548718412503,0.339957450954573,2.18175345170189,1.0580536810308,0.371995018166751,0,0,0.252332849670158,0.327796715891087,0.380095503034311,0.203977659483963,0.26721740526556,0.0918948995348449,0.50141507858475,2.95536923051134,2.41167717140561,1.65833887891756,0.827463966895162,1.91910583710883,0.952257725854961,1.29177819672012,0.558672428662721,0.448527450322454,0.445530107947154,0.808468755832877,1.08858373948481,0.342233301085281,1.01028079521881,0.573777643141411,1.99596213927608,0.162806537221949,0.213454691755431,0,0.179650404213174,0,0.611207220914332,1.22068853494722,1.33151354837103,1.61019034872821,1.28227396921293 | |||
|short_description=p4@DCAF12 | |||
}} |
Latest revision as of 04:47, 17 September 2015
Short description: | p4@DCAF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DCAF12_5end |
Coexpression cluster: | NA |
Association with transcript: | 153bp_to_ENST00000361264, NM_015397, uc003ztt.2_5end |
EntrezGene: | DCAF12 |
HGNC: | 19911 |
UniProt: | Q5T6F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.56e-25 | 108 |
common myeloid progenitor | 3.56e-25 | 108 |
myeloid leukocyte | 1.70e-23 | 72 |
granulocyte monocyte progenitor cell | 9.38e-23 | 67 |
myeloid lineage restricted progenitor cell | 3.56e-22 | 66 |
hematopoietic stem cell | 1.95e-20 | 168 |
hematopoietic cell | 1.86e-19 | 177 |
macrophage dendritic cell progenitor | 3.04e-19 | 61 |
monopoietic cell | 3.16e-19 | 59 |
monocyte | 3.16e-19 | 59 |
monoblast | 3.16e-19 | 59 |
promonocyte | 3.16e-19 | 59 |
hematopoietic oligopotent progenitor cell | 2.04e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-18 | 161 |
leukocyte | 9.64e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.63e-13 | 120 |
defensive cell | 2.24e-12 | 48 |
phagocyte | 2.24e-12 | 48 |
nongranular leukocyte | 4.91e-12 | 115 |
classical monocyte | 4.58e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.58e-09 | 42 |
endothelial cell | 5.57e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.12e-29 | 108 |
hematopoietic system | 2.26e-27 | 98 |
blood island | 2.26e-27 | 98 |
immune system | 6.77e-22 | 93 |
bone marrow | 2.96e-20 | 76 |
lateral plate mesoderm | 3.41e-18 | 203 |
bone element | 1.29e-17 | 82 |
skeletal element | 1.31e-15 | 90 |
skeletal system | 4.89e-14 | 100 |
mesoderm | 1.08e-08 | 315 |
mesoderm-derived structure | 1.08e-08 | 315 |
presumptive mesoderm | 1.08e-08 | 315 |
blood | 1.26e-08 | 15 |
haemolymphatic fluid | 1.26e-08 | 15 |
organism substance | 1.26e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.62e-08 | 31 |
hematologic cancer | 1.48e-07 | 51 |
immune system cancer | 1.48e-07 | 51 |
leukemia | 2.88e-07 | 39 |