FFCP PHASE1:Hg19::chr1:153330693..153330704,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6280 | |EntrezGene=6280 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10499 | |HGNC=10499 | ||
|TSSclassifier=strong | |||
|UniProt=P06702 | |UniProt=P06702 | ||
|association_with_transcript=-39bp_to_M26311_5end | |association_with_transcript=-39bp_to_M26311_5end | ||
|cluster_id=chr1:153330693..153330704,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_S100A9_5end | |description=CAGE_peak_4_at_S100A9_5end | ||
|id=chr1:153330693..153330704,+ | |id=chr1:153330693..153330704,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.13e-71!76;CL:0002194!3.54e-69!63;CL:0000576!3.54e-69!63;CL:0000040!3.54e-69!63;CL:0000559!3.54e-69!63;CL:0002009!1.33e-66!65;CL:0000839!8.35e-61!70;CL:0002057!3.28e-60!42;CL:0000557!9.64e-60!71;CL:0000860!2.20e-55!45;CL:0000763!1.60e-50!112;CL:0000049!1.60e-50!112;CL:0000738!9.89e-45!140;CL:0002087!6.75e-44!119;CL:0000037!1.89e-38!172;CL:0000566!1.89e-38!172;CL:0002031!1.70e-36!124;CL:0002032!1.73e-36!165;CL:0000837!1.73e-36!165;CL:0000988!2.70e-35!182;CL:0002393!1.08e-14!9;CL:0002397!1.08e-14!9;CL:0000134!3.00e-10!358;CL:0002320!9.99e-10!365;CL:0000094!6.95e-09!8;CL:0000235!4.37e-08!10;CL:0002619!5.12e-08!3;CL:0000219!6.51e-08!390;CL:0000875!1.05e-07!3;CL:0002396!1.05e-07!3 | |ontology_enrichment_celltype=CL:0000766!3.13e-71!76;CL:0002194!3.54e-69!63;CL:0000576!3.54e-69!63;CL:0000040!3.54e-69!63;CL:0000559!3.54e-69!63;CL:0002009!1.33e-66!65;CL:0000839!8.35e-61!70;CL:0002057!3.28e-60!42;CL:0000557!9.64e-60!71;CL:0000860!2.20e-55!45;CL:0000763!1.60e-50!112;CL:0000049!1.60e-50!112;CL:0000738!9.89e-45!140;CL:0002087!6.75e-44!119;CL:0000037!1.89e-38!172;CL:0000566!1.89e-38!172;CL:0002031!1.70e-36!124;CL:0002032!1.73e-36!165;CL:0000837!1.73e-36!165;CL:0000988!2.70e-35!182;CL:0002393!1.08e-14!9;CL:0002397!1.08e-14!9;CL:0000134!3.00e-10!358;CL:0002320!9.99e-10!365;CL:0000094!6.95e-09!8;CL:0000235!4.37e-08!10;CL:0002619!5.12e-08!3;CL:0000219!6.51e-08!390;CL:0000875!1.05e-07!3;CL:0002396!1.05e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.12e-36;39!CL:0000234;6.12e-36;39!CL:0000235;6.36e-36;6!CL:0000576;2.42e-34;48!CL:0000766;3.90e-30;69!CL:0000860;4.02e-23;33!CL:0002057;4.02e-23;33!CL:0002619;4.35e-19;3!CL:0000875;3.87e-18;3!CL:0002396;3.87e-18;3!CL:0000763;1.83e-16;100!CL:0000738;2.18e-09;136!CL:0002393;3.04e-09;6!CL:0002397;3.04e-09;6!CL:0002087;3.07e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.27e-70,59;CL:0000576,2.27e-70,59;CL:0000040,2.27e-70,59;CL:0000559,2.27e-70,59;CL:0000473,6.07e-70,48;CL:0000234,6.07e-70,48;CL:0002009,6.31e-68,61;CL:0000766,7.08e-66,72;CL:0000839,1.88e-62,66;CL:0000557,1.87e-61,67;CL:0000860,1.01e-44,42;CL:0002057,1.01e-44,42;CL:0000763,2.97e-42,108;CL:0000049,2.97e-42,108;CL:0000235,6.20e-36,6;CL:0002087,9.50e-34,115;CL:0000738,1.90e-32,136;CL:0002031,4.00e-32,120;CL:0002032,1.50e-26,161;CL:0000837,1.50e-26,161;CL:0000037,3.29e-25,168;CL:0000988,1.22e-23,177;CL:0002393,6.99e-23,9;CL:0002397,6.99e-23,9;CL:0002619,4.23e-19,3;CL:0000875,2.98e-18,3;CL:0002396,2.98e-18,3;CL:0000134,8.76e-10,354;CL:0002320,1.78e-09,361;CL:0000219,2.16e-08,386;CL:0000048,4.58e-07,427;CL:0000723,6.98e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-33;42!CL:0000049;3.28e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.56e-62!102;UBERON:0003061!7.56e-62!102;UBERON:0002193!1.09e-56!112;UBERON:0002371!2.28e-51!80;UBERON:0001474!9.32e-47!86;UBERON:0004765!1.26e-37!101;UBERON:0001434!1.26e-37!101;UBERON:0002405!2.31e-37!115;UBERON:0003081!5.12e-24!216;UBERON:0002204!5.37e-20!167;UBERON:0000178!1.38e-09!15;UBERON:0000179!1.38e-09!15;UBERON:0000463!1.38e-09!15;UBERON:0002384!1.54e-09!375;UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.47e-54,98;UBERON:0003061,6.47e-54,98;UBERON:0002371,1.24e-53,76;UBERON:0001474,2.32e-49,82;UBERON:0002193,1.94e-48,108;UBERON:0004765,1.54e-44,90;UBERON:0002405,6.09e-43,93;UBERON:0001434,1.39e-39,100;UBERON:0003081,3.85e-23,203;UBERON:0002204,1.43e-21,167;UBERON:0000926,8.60e-13,315;UBERON:0004120,8.60e-13,315;UBERON:0006603,8.60e-13,315;UBERON:0002384,4.67e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,13.6588439286354,9.06902264853143,12.8787783817093,0.872389432677388,2.26725566213286,0.485168122375632,2.32429036905685,0.822335776043652,0.929119112685311,1.43846196161075,0.768482119587302,2.36482229888585,0.689491361473237,0,0,1.31769637679823,0.272906150057846,0.898893937780338,0.612167784741805,0.320929027076094,0,1.9791078011203,0.997318288108159,0.426224750532694,0.580418477257168,0,2.4912889959823,1.25624332628372,0.521482918420201,1.08594422352558,1.21079900526674,2.20966581592539,0.632924774881769,1.90129757680748,4.67729459923096,2.30624510059213,1.23561494261145,1.50176892841506,0.964353520182481,5.13022938734247,1.79025009479181,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0646332982825,3.97807250736704,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,7.03159928004977,18.9750545534728,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.714695326373367,1.23408681925858,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,13.6588439286354,9.06902264853143,12.8787783817093,0.872389432677388,2.26725566213286,0.485168122375632,2.32429036905685,0.822335776043652,0.929119112685311,1.43846196161075,0.768482119587302,2.36482229888585,0.689491361473237,0,0,1.31769637679823,0.272906150057846,0.898893937780338,0.612167784741805,0.320929027076094,0,1.9791078011203,0.997318288108159,0.426224750532694,0.580418477257168,0,2.4912889959823,1.25624332628372,0.521482918420201,1.08594422352558,1.21079900526674,2.20966581592539,0.632924774881769,1.90129757680748,4.67729459923096,2.30624510059213,1.23561494261145,1.50176892841506,0.964353520182481,5.13022938734247,1.79025009479181,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0646332982825,3.97807250736704,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,7.03159928004977,18.9750545534728,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.714695326373367,1.23408681925858,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p4@S100A9 | |short_description=p4@S100A9 | ||
}} | }} |
Latest revision as of 04:56, 17 September 2015
Short description: | p4@S100A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_S100A9_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -39bp_to_M26311_5end |
EntrezGene: | S100A9 |
HGNC: | 10499 |
UniProt: | P06702 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.47e-54 | 98 |
blood island | 6.47e-54 | 98 |
bone marrow | 1.24e-53 | 76 |
bone element | 2.32e-49 | 82 |
hemolymphoid system | 1.94e-48 | 108 |
skeletal element | 1.54e-44 | 90 |
immune system | 6.09e-43 | 93 |
skeletal system | 1.39e-39 | 100 |
lateral plate mesoderm | 3.85e-23 | 203 |
musculoskeletal system | 1.43e-21 | 167 |
mesoderm | 8.60e-13 | 315 |
mesoderm-derived structure | 8.60e-13 | 315 |
presumptive mesoderm | 8.60e-13 | 315 |
connective tissue | 4.67e-09 | 371 |