FFCP PHASE1:Hg19::chr2:144004909..144004927,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:144004909..144004927,+
|short_description=p6@ARHGAP15
|description=CAGE_peak_6_at_ARHGAP15_5end
|association_with_transcript=50bp_to_ENST00000469117_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55843 | |EntrezGene=55843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21030 | |HGNC=21030 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000469117_5end | |||
|cluster_id=chr2:144004909..144004927,+ | |||
|coexpression_cluster_id=C1370 | |||
|description=CAGE_peak_6_at_ARHGAP15_5end | |||
|id=chr2:144004909..144004927,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.24e-30!18;CL:0000789!8.24e-30!18;CL:0002420!8.24e-30!18;CL:0002419!8.24e-30!18;CL:0000790!8.24e-30!18;CL:0000625!2.03e-21!11;CL:0000738!1.21e-20!140;CL:0000084!7.23e-20!25;CL:0000827!7.23e-20!25;CL:0000037!1.03e-15!172;CL:0000566!1.03e-15!172;CL:0000988!4.88e-14!182;CL:0002032!1.18e-12!165;CL:0000837!1.18e-12!165;CL:0000838!1.22e-12!52;CL:0002087!1.46e-12!119;CL:0000542!2.82e-12!53;CL:0000051!2.82e-12!53;CL:0000624!4.20e-12!6;CL:0002031!2.53e-11!124;CL:0000094!6.45e-08!8;CL:0000623!6.18e-07!3;CL:0000825!6.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.14e-49;18!CL:0000789;2.14e-49;18!CL:0002419;2.14e-49;18!CL:0000625;5.84e-35;11!CL:0000084;3.14e-34;25!CL:0000624;3.63e-19;6!CL:0000623;1.30e-10;3!CL:0000542;2.72e-10;53!CL:0000226;3.24e-10;3!CL:0000842;3.24e-10;3!CL:0000898;4.70e-10;3!CL:0000767;1.71e-09;3!CL:0000094;3.39e-09;8!CL:0000771;4.30e-07;2!CL:0000815;6.02e-07;2!CL:0000792;6.02e-07;2!CL:0002677;6.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.67e-49,18;CL:0000789,1.67e-49,18;CL:0002420,1.67e-49,18;CL:0002419,1.67e-49,18;CL:0000790,1.67e-49,18;CL:0000625,5.69e-35,11;CL:0000084,2.64e-34,25;CL:0000827,2.64e-34,25;CL:0000738,7.43e-22,136;CL:0000838,2.91e-20,52;CL:0000542,8.89e-20,53;CL:0000051,8.89e-20,53;CL:0000624,2.88e-19,6;CL:0000037,4.84e-17,168;CL:0000988,1.08e-15,177;CL:0002087,1.46e-15,115;CL:0002032,1.29e-14,161;CL:0000837,1.29e-14,161;CL:0002031,4.11e-12,120;CL:0000623,1.34e-10,3;CL:0000825,1.34e-10,3;CL:0000226,3.56e-10,3;CL:0000842,3.56e-10,3;CL:0000898,3.67e-10,3;CL:0000767,1.64e-09,3;CL:0000094,3.22e-09,8;CL:0000771,4.11e-07,2;CL:0000815,4.65e-07,2;CL:0000792,4.65e-07,2;CL:0002677,4.65e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.14e-49;18!CL:0000051;2.72e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.66e-16!15;UBERON:0000179!2.66e-16!15;UBERON:0000463!2.66e-16!15;UBERON:0007023!1.91e-11!115;UBERON:0002390!1.38e-08!102;UBERON:0003061!1.38e-08!102;UBERON:0002193!1.72e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.72e-27;15!UBERON:0000179;3.72e-27;15!UBERON:0000463;3.72e-27;15!UBERON:0002390;1.56e-12;32!UBERON:0002193;1.81e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.56e-27,15;UBERON:0000179,3.56e-27,15;UBERON:0000463,3.56e-27,15;UBERON:0002390,3.84e-08,98;UBERON:0003061,3.84e-08,98;UBERON:0002193,8.88e-08,108 | |||
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| ||
|short_description=p6@ARHGAP15 | |||
}} | }} |
Latest revision as of 06:09, 17 September 2015
Short description: | p6@ARHGAP15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGAP15_5end |
Coexpression cluster: | C1370_CD8_CD4_Natural_Peripheral_Whole_Basophils_blood |
Association with transcript: | 50bp_to_ENST00000469117_5end |
EntrezGene: | ARHGAP15 |
HGNC: | 21030 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.67e-49 | 18 |
alpha-beta T cell | 1.67e-49 | 18 |
immature T cell | 1.67e-49 | 18 |
mature T cell | 1.67e-49 | 18 |
immature alpha-beta T cell | 1.67e-49 | 18 |
CD8-positive, alpha-beta T cell | 5.69e-35 | 11 |
T cell | 2.64e-34 | 25 |
pro-T cell | 2.64e-34 | 25 |
leukocyte | 7.43e-22 | 136 |
lymphoid lineage restricted progenitor cell | 2.91e-20 | 52 |
lymphocyte | 8.89e-20 | 53 |
common lymphoid progenitor | 8.89e-20 | 53 |
CD4-positive, alpha-beta T cell | 2.88e-19 | 6 |
hematopoietic stem cell | 4.84e-17 | 168 |
hematopoietic cell | 1.08e-15 | 177 |
nongranular leukocyte | 1.46e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.29e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 4.11e-12 | 120 |
natural killer cell | 1.34e-10 | 3 |
pro-NK cell | 1.34e-10 | 3 |
single nucleate cell | 3.56e-10 | 3 |
mononuclear cell | 3.56e-10 | 3 |
naive T cell | 3.67e-10 | 3 |
basophil | 1.64e-09 | 3 |
granulocyte | 3.22e-09 | 8 |
eosinophil | 4.11e-07 | 2 |
regulatory T cell | 4.65e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.65e-07 | 2 |
naive regulatory T cell | 4.65e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.56e-27 | 15 |
haemolymphatic fluid | 3.56e-27 | 15 |
organism substance | 3.56e-27 | 15 |
hematopoietic system | 3.84e-08 | 98 |
blood island | 3.84e-08 | 98 |
hemolymphoid system | 8.88e-08 | 108 |