FFCP PHASE2:Hg19::chr5:176873789..176873853,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:80758 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:28130 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=80758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=28130 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8TB68 | ||
|association_with_transcript=0bp_to_ENST00000323249,ENST00000502922,NM_001174101,NM_030567,uc003mgu.1,uc003mgv.1_5end | |association_with_transcript=0bp_to_ENST00000323249,ENST00000502922,NM_001174101,NM_030567,uc003mgu.1,uc003mgv.1_5end | ||
|cluster_id=chr5:176873789..176873853,+ | |cluster_id=chr5:176873789..176873853,+ |
Latest revision as of 06:25, 17 September 2015
Short description: | p1@PRR7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRR7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323249, ENST00000502922, NM_001174101, NM_030567, uc003mgu.1, uc003mgv.1_5end |
EntrezGene: | PRR7 |
HGNC: | 28130 |
UniProt: | Q8TB68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PRR7 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 5.35e-20 | 250 |
mesodermal cell | 4.53e-13 | 121 |
muscle precursor cell | 2.30e-10 | 58 |
myoblast | 2.30e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.30e-10 | 58 |
epithelial cell | 3.01e-10 | 253 |
muscle cell | 1.90e-09 | 55 |
electrically responsive cell | 7.99e-09 | 61 |
electrically active cell | 7.99e-09 | 61 |
vascular associated smooth muscle cell | 1.13e-08 | 32 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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epithelium | 1.51e-23 | 306 |
cell layer | 1.61e-23 | 309 |
tube | 2.43e-14 | 192 |
structure with developmental contribution from neural crest | 5.73e-12 | 132 |
epithelial vesicle | 5.82e-12 | 78 |
ectoderm-derived structure | 8.01e-12 | 171 |
ectoderm | 8.01e-12 | 171 |
presumptive ectoderm | 8.01e-12 | 171 |
anatomical conduit | 1.39e-11 | 240 |
dense mesenchyme tissue | 1.40e-11 | 73 |
Showing 1 to 10 of 69 entries