FFCP PHASE1:Hg19::chr10:14574705..14574718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83641 | |EntrezGene=83641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |HGNC=23726 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQ40 | |UniProt=C9JQ40 | ||
|association_with_transcript=0bp_to_ENST00000489100_5end | |association_with_transcript=0bp_to_ENST00000489100_5end | ||
|cluster_id=chr10:14574705..14574718,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_18_at_FAM107B_5end | |description=CAGE_peak_18_at_FAM107B_5end | ||
|id=chr10:14574705..14574718,- | |id=chr10:14574705..14574718,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;8.57e-14;1!CL:0000182;8.26e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.33e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.35e-15;13!UBERON:0001045;6.24e-14;1!UBERON:0004161;1.19e-10;11!UBERON:0001041;8.73e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.42e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:7;9.35e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,8.59e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.39e-12!129;UBERON:0004185!2.39e-12!129;UBERON:0001737!5.54e-11!9;UBERON:0000059!2.38e-10!11;UBERON:0004119!4.09e-10!169;UBERON:0000925!4.09e-10!169;UBERON:0006595!4.09e-10!169;UBERON:0005172!5.03e-10!55;UBERON:0005173!5.03e-10!55;UBERON:0001007!6.12e-10!155;UBERON:0001555!6.12e-10!155;UBERON:0007026!6.12e-10!155;UBERON:0000160!6.80e-10!27;UBERON:0001155!4.39e-09!9;UBERON:0002417!1.13e-08!61;UBERON:0000916!1.13e-08!61;UBERON:0005409!1.20e-08!35;UBERON:0009854!1.21e-07!23;UBERON:0000077!4.01e-07!130;UBERON:0000481!4.17e-07!347;UBERON:0009497!9.06e-07!25;UBERON:0000015!9.06e-07!25;UBERON:0002423!9.06e-07!25;UBERON:0006235!9.06e-07!25;UBERON:0004161!9.06e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.15e-55;17!UBERON:0005409;3.49e-43;22!UBERON:0000059;2.00e-28;11!UBERON:0004921;7.03e-27;33!UBERON:0002108;1.90e-23;4!UBERON:0001155;9.89e-23;9!UBERON:0001154;6.24e-14;1!UBERON:0001153;6.24e-14;1!UBERON:0009854;6.24e-14;1!UBERON:0001007;3.75e-13;81!UBERON:0004907;7.14e-11;5!UBERON:0001555;2.40e-10;54!UBERON:0002423;4.18e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.73e-55,17;UBERON:0005409,3.57e-38,25;UBERON:0000059,1.64e-28,11;UBERON:0002108,1.90e-23,4;UBERON:0001155,9.36e-23,9;UBERON:0004921,3.92e-16,118;UBERON:0001154,6.65e-14,1;UBERON:0001153,6.65e-14,1;UBERON:0001045,6.65e-14,1;UBERON:0009854,2.62e-13,23;UBERON:0001007,7.53e-13,145;UBERON:0001555,7.53e-13,145;UBERON:0007026,7.53e-13,145;UBERON:0009856,9.03e-12,26;UBERON:0004119,1.69e-11,160;UBERON:0000925,1.69e-11,160;UBERON:0006595,1.69e-11,160;UBERON:0004907,6.47e-11,5;UBERON:0008835,3.78e-09,22;UBERON:0003894,3.78e-09,22;UBERON:0011216,4.82e-09,223;UBERON:0007499,4.47e-08,25;UBERON:0009497,4.47e-08,25;UBERON:0000015,4.47e-08,25;UBERON:0002423,4.47e-08,25;UBERON:0006235,4.47e-08,25;UBERON:0004161,4.47e-08,25 | |||
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| ||
|short_description=p18@FAM107B | |short_description=p18@FAM107B | ||
}} | }} |
Latest revision as of 07:30, 17 September 2015
Short description: | p18@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_FAM107B_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000489100_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | C9JQ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.33e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.73e-55 | 17 |
gastrointestinal system | 3.57e-38 | 25 |
large intestine | 1.64e-28 | 11 |
small intestine | 1.90e-23 | 4 |
colon | 9.36e-23 | 9 |
subdivision of digestive tract | 3.92e-16 | 118 |
vermiform appendix | 6.65e-14 | 1 |
caecum | 6.65e-14 | 1 |
midgut | 6.65e-14 | 1 |
digestive tract diverticulum | 2.62e-13 | 23 |
digestive system | 7.53e-13 | 145 |
digestive tract | 7.53e-13 | 145 |
primitive gut | 7.53e-13 | 145 |
sac | 9.03e-12 | 26 |
endoderm-derived structure | 1.69e-11 | 160 |
endoderm | 1.69e-11 | 160 |
presumptive endoderm | 1.69e-11 | 160 |
lower digestive tract | 6.47e-11 | 5 |
hepatic diverticulum | 3.78e-09 | 22 |
liver primordium | 3.78e-09 | 22 |
organ system subdivision | 4.82e-09 | 223 |
epithelial sac | 4.47e-08 | 25 |
epithelium of foregut-midgut junction | 4.47e-08 | 25 |
anatomical boundary | 4.47e-08 | 25 |
hepatobiliary system | 4.47e-08 | 25 |
foregut-midgut junction | 4.47e-08 | 25 |
septum transversum | 4.47e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 8.59e-08 | 39 |