FFCP PHASE1:Hg19::chr1:27684109..27684135,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:27684109..27684135,- to FFCP PHASE1:Hg19::chr1:27684109..27684135,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9064 | |EntrezGene=9064 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6858 | |HGNC=6858 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000476509_5end | |||
|cluster_id=chr1:27684109..27684135,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_MAP3K6_5end | |||
|id=chr1:27684109..27684135,- | |||
|ontology_enrichment_celltype=CL:0000542!3.37e-33!53;CL:0000051!3.37e-33!53;CL:0000838!3.03e-32!52;CL:0000084!6.04e-20!25;CL:0000827!6.04e-20!25;CL:0000738!4.22e-19!140;CL:0000791!5.07e-19!18;CL:0000789!5.07e-19!18;CL:0002420!5.07e-19!18;CL:0002419!5.07e-19!18;CL:0000790!5.07e-19!18;CL:0000988!7.64e-16!182;CL:0000037!1.07e-15!172;CL:0000566!1.07e-15!172;CL:0002087!3.43e-15!119;CL:0002032!9.03e-14!165;CL:0000837!9.03e-14!165;CL:0002031!2.82e-13!124;CL:0000625!9.48e-13!11;CL:0000236!2.41e-11!14;CL:0000945!5.64e-11!24;CL:0000826!5.64e-11!24;CL:0000624!1.05e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.12e-40;18!CL:0000789;1.12e-40;18!CL:0002419;1.12e-40;18!CL:0000084;1.97e-39;25!CL:0000625;1.25e-28;11!CL:0000542;9.54e-27;53!CL:0000624;2.65e-16;6!CL:0000236;8.23e-12;13!CL:0000623;3.62e-09;3!CL:0000945;6.83e-09;24!CL:0000898;8.73e-09;3!CL:0002087;4.35e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.27e-50,53;CL:0000051,1.27e-50,53;CL:0000838,1.54e-48,52;CL:0000791,6.19e-41,18;CL:0000789,6.19e-41,18;CL:0002420,6.19e-41,18;CL:0002419,6.19e-41,18;CL:0000790,6.19e-41,18;CL:0000084,1.53e-39,25;CL:0000827,1.53e-39,25;CL:0000625,9.79e-29,11;CL:0002087,4.43e-22,115;CL:0000738,1.46e-19,136;CL:0002031,7.81e-17,120;CL:0000624,1.81e-16,6;CL:0000037,6.93e-16,168;CL:0002032,6.51e-15,161;CL:0000837,6.51e-15,161;CL:0000988,1.49e-14,177;CL:0000236,1.67e-13,14;CL:0000623,2.50e-09,3;CL:0000825,2.50e-09,3;CL:0000898,5.54e-09,3;CL:0000945,7.19e-09,24;CL:0000826,7.19e-09,24;CL:0000815,8.85e-07,2;CL:0000792,8.85e-07,2;CL:0002677,8.85e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-40;18!CL:0000051;9.54e-27;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.87e-14!15;UBERON:0000179!4.87e-14!15;UBERON:0000463!4.87e-14!15;UBERON:0007023!3.84e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-16;15!UBERON:0000179;2.63e-16;15!UBERON:0000463;2.63e-16;15!UBERON:0002390;1.75e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.76e-16,15;UBERON:0000179,3.76e-16,15;UBERON:0000463,3.76e-16,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.802177789880567,1.95309783644267,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,2.18455444504853,0.889509253863555,3.41384178053206,0.400395987036012,2.87376219977242,3.30522436392431,1.90810750907073,1.1384259382189,2.34894875748376,0.382273228125229,0,1.12101712596307,0.263384084775077,6.29471264364266,2.35806457649499,2.46721798799411,2.67498392625085,4.88883399950386,5.6813736688168,5.84480185223734,3.23090324967003,2.65145316727353,3.1014745241707,1.08321545506006,4.09892223122161,2.47112760363769,2.79544437826249,4.42160028457357,3.47763702882063,6.82118190545478,4.28065324943541,5.22677619024884,1.92625882585863,1.91610246800961,4.46715679127419,0.759059076058509,2.22995790026868,5.20866763085135,2.85135613334512,3.16207750063323,5.75939750194883,4.99722906209383,2.8413270245282,1.64225599384209,2.01606743224732,1.33720097891754,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,2.95546140302891,2.58753089831421,5.77543663258868,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.862856803274467,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,3.82318603571188,1.13929437434833,3.09701308095126,4.11362273086194,2.59389324477087,2.16012574895246,0.79312517629427,0.106824071127473,0,0,2.22963810150862,0.28853842595289,0.142283686696828,1.11598390910176,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0.748562161632879,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0.19924798825107,1.10513566212459,0.503865495708552,0,0.738508832766417,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.442317039724898,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0,0,4.08773192782946,0,1.32969345520125,0,0.19606253431774,0,0,0.317873157960757,0,0,0,1.29833183845255,0,0.353830258013357,0,0.593042257361244,0.123563938946503,0.104421949505455,0.067401132980677,0,0.234264445725339,1.27718352450966,0,0,1.97292201424695,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0.176512253383001,0.451961481561065,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,3.41753560563109,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20172318598255,0.109209638192014,0.169732529954025,0.212574920101683,0.123935764259002,0.558644917973244,0,0.315446980005013,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0.295712172434091,0,0,0,0,0,1.09651553371436,0,1.58284119923659,0,0,0,0.606965604236632,1.13831095675649,0,1.03710588800201,0.171488009437418,0.0679697329768317,0,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.142953088353313,0,0.116241425368125,0.521574816907738,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.469919589899268,0.45120521581504,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0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| 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| ||
|short_description=p3@MAP3K6 | |||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p3@MAP3K6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAP3K6_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -4bp_to_ENST00000476509_5end |
EntrezGene: | MAP3K6 |
HGNC: | 6858 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.27e-50 | 53 |
common lymphoid progenitor | 1.27e-50 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-48 | 52 |
mature alpha-beta T cell | 6.19e-41 | 18 |
alpha-beta T cell | 6.19e-41 | 18 |
immature T cell | 6.19e-41 | 18 |
mature T cell | 6.19e-41 | 18 |
immature alpha-beta T cell | 6.19e-41 | 18 |
T cell | 1.53e-39 | 25 |
pro-T cell | 1.53e-39 | 25 |
CD8-positive, alpha-beta T cell | 9.79e-29 | 11 |
nongranular leukocyte | 4.43e-22 | 115 |
leukocyte | 1.46e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 7.81e-17 | 120 |
CD4-positive, alpha-beta T cell | 1.81e-16 | 6 |
hematopoietic stem cell | 6.93e-16 | 168 |
hematopoietic oligopotent progenitor cell | 6.51e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.51e-15 | 161 |
hematopoietic cell | 1.49e-14 | 177 |
B cell | 1.67e-13 | 14 |
natural killer cell | 2.50e-09 | 3 |
pro-NK cell | 2.50e-09 | 3 |
naive T cell | 5.54e-09 | 3 |
lymphocyte of B lineage | 7.19e-09 | 24 |
pro-B cell | 7.19e-09 | 24 |
regulatory T cell | 8.85e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.85e-07 | 2 |
naive regulatory T cell | 8.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.76e-16 | 15 |
haemolymphatic fluid | 3.76e-16 | 15 |
organism substance | 3.76e-16 | 15 |