FFCP PHASE1:Hg19::chr13:39917807..39917832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10186 | |EntrezGene=10186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6586 | |HGNC=6586 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_AL137388_5end | |association_with_transcript=24bp_to_AL137388_5end | ||
|cluster_id=chr13:39917807..39917832,- | |||
|description=CAGE_peak_3_at_LHFP_5end | |description=CAGE_peak_3_at_LHFP_5end | ||
|id=chr13:39917807..39917832,- | |id=chr13:39917807..39917832,- | ||
|ontology_enrichment_celltype=CL:0000057!8.15e-09!75;CL:0000055!8.67e-09!180;CL:0002334!1.25e-07!12 | |ontology_enrichment_celltype=CL:0000057!8.15e-09!75;CL:0000055!8.67e-09!180;CL:0002334!1.25e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.30e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.60e-10,12;CL:0000057,4.48e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.37e-13!94;UBERON:0001016!4.37e-13!94;UBERON:0001017!5.30e-13!82;UBERON:0005743!1.37e-12!86;UBERON:0000924!9.93e-12!173;UBERON:0006601!9.93e-12!173;UBERON:0001049!2.96e-11!57;UBERON:0005068!2.96e-11!57;UBERON:0006241!2.96e-11!57;UBERON:0007135!2.96e-11!57;UBERON:0002616!8.23e-11!59;UBERON:0004121!8.94e-11!169;UBERON:0000955!5.04e-10!69;UBERON:0006238!5.04e-10!69;UBERON:0007023!5.26e-09!115;UBERON:0003080!5.70e-09!42;UBERON:0002346!6.75e-09!90;UBERON:0002780!1.41e-08!41;UBERON:0001890!1.41e-08!41;UBERON:0006240!1.41e-08!41;UBERON:0003075!6.47e-08!86;UBERON:0007284!6.47e-08!86;UBERON:0002020!1.10e-07!34;UBERON:0003528!1.10e-07!34;UBERON:0000033!2.01e-07!123;UBERON:0000153!3.62e-07!129;UBERON:0007811!3.62e-07!129;UBERON:0002791!8.19e-07!33;UBERON:0000475!9.61e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.03e-09;9!UBERON:0000042;6.03e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.40e-09,89;UBERON:0001049,7.44e-09,56;UBERON:0005068,7.44e-09,56;UBERON:0006241,7.44e-09,56;UBERON:0007135,7.44e-09,56;UBERON:0001017,1.53e-08,81;UBERON:0004121,1.10e-07,171;UBERON:0000924,1.10e-07,171;UBERON:0006601,1.10e-07,171;UBERON:0000073,1.68e-07,53;UBERON:0002616,1.68e-07,53;UBERON:0002346,5.85e-07,86 | |||
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|phase1_expression=7.26713517082227,9.84862409898522,12.2630331563495,7.00513088471913,3.5756887554183,9.59572376510406,0,0.631719873426831,0.783556884599516,0,0,0.436882744260345,0,0.866364470720326,0.662794751455832,1.34465029290355,1.80808358407193,0.730310090387373,1.95173119516203,0.61560529038394,1.02000345622126,0,1.43117993565528,2.05311637609326,0.627713197974014,0.305653622991805,0.246301768349837,0.550975469195755,0,0,0.154816123316076,0,0,0,0.774672005803016,2.27470771979874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.01210257911091,0.511450247374121,45.5413332004553,0.50133791063589,8.5459446186886,0.795285947051099,0,0.472674085820339,0.886917589850256,0.614843499851882,0.851363990735132,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0.760272105718513,1.22031028774085,0.367663080345869,0,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,0,0,3.47880366186723,1.51956613997496,0.397227542439656,6.02356903572509,3.19201543978521,0,0,0.49333509683432,0.933633106199299,0.404132016209064,0.490385709340376,2.72443369760877,4.60940739583999,0,1.87296046098192,0.570471821544449,3.28787097213962,0.352303495931295,0.323745888736263,0.702254033511242,0.61246251376468,0.368502951935304,0.619954687054593,2.37600571456411,6.18167323196392,0,0,0.168336113954066,0.875829639103749,0.554128230968366,0,2.14541457059314,2.10333282469236,0.453728732640084,5.56107870635472,3.84403299873421,5.72216133130817,2.40072876867522,2.78241828943785,2.06112432036503,4.28068769562657,1.35021065793013,1.65642908774038,3.5340728394176,4.32634523618807,3.39456719319505,4.61512470271599,2.61955455391865,1.18692414617341,0.966304265816484,0.545492241181669,0.286804595389004,0,0,0.464775771478074,0.518305275076852,0.504641701751257,0.72995471815166,0,10.935095949279,0,9.28735856063958,1.44375896333917,0,0.674338760312407,0,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,2.23038153388083,0.878002283269004,0,1.00528972411631,0.740707561268237,0.325808305310325,0,0,0.927443239800615,0.117408694235822,0.721832238805369,0,1.90254152234598,0,0,0,0,0.297262324577456,0,1.6798212819886,1.13420077793909,1.61205340865127,0.581267877027924,0,0,0,0,0,0.12624243342638,0.698476837213859,0,0,1.71072446022705,0.822619941626588,0.901029173531752,0.857479297891735,0.448524337381443,1.30788020649984,2.2001485746285,2.32689088364,0,1.690605505112,2.6593811658487,5.2003718455683,0.514414748524284,0,1.0656887160644,2.57360388584666,0,0.823240336780769,1.30294473717494,0.710783897485092,0,0.301439377059586,0,0.499864955910285,0,0,0,4.0736225433569,3.44585807502342,1.42636905040718,2.17171960001369,2.05476322550383,1.96967059563885,0,0,0,0,5.33598710867173,1.30139853857622,1.54657762555539,2.17771144934653,10.8449587781038,0,0,0,1.8403723757871,3.00102312635806,1.89885516589815,7.90289273817067,12.6684582045985,13.5624076929184,5.50564650465752,0.300946099727719,0,0,5.97803038681893,0,1.99832313276591,0.391602314925481,2.40200396667599,0,0,0,0,1.66435439510497,0.907170879989041,6.69891081110698,2.91577749247319,4.77122160536225,12.1732191792916,8.18731598506726,6.11244900345709,4.45254199334973,5.24312958929029,2.48586415438378,5.25613798488379,5.71179872101983,2.44041794765914,0,1.40354529212299,0.460404944679482,2.98517565227978,6.73737321624853,1.96686622439136,0,0.308061348417659,0,0,0.422206515571503,0,0.510281115829547,1.0795795805107,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.769350375349168,0,0.325378394664303,0.103041011647722,1.28197250745681,0.907604499126468,1.14853107599234,1.30012049207304,0,1.16004861950546,1.84858340537573,1.38153307253517,0.964856007391714,1.39646318328756,1.74020032697074,0.426133137080504,1.15741646340759,0.495854746082934,0,0.638063562472921,0.10115778085555,7.43752878875657,5.03699754929024,0,0.308033580176089,0,0,0.18532421910392,0.715624433709956,0.744316738719335,0.632758849437452,0.762520775695299,0.255897791311334,2.1396949401696,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,1.94970791705028,0,7.09799539321526,9.33275850894504,0,0,1.32687795048244,1.31535265576129,0,1.9676842561399,0,0.30982349809975,0,0.860468113224309,0.294747123039363,0,0,9.71095122369255,19.4283986846342,0,0.349934720244983,0.0962221127255121,0,0,0.847294206991012,0,1.68471475667626,0,0.689170200620878,0,0,0,0.238231775457789,0,0,0,0,0,0,1.22520107990516,0,0.577076851905779,0,0.159426272728822,0,0.191505370132367,0,0.649243880549111,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0.33307196799782,0,0,0.293016358543788,0,0,0.284136146806413,1.193722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| ||
|short_description=p3@LHFP | |short_description=p3@LHFP | ||
}} | }} |
Latest revision as of 07:47, 17 September 2015
Short description: | p3@LHFP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LHFP_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_AL137388_5end |
EntrezGene: | LHFP |
HGNC: | 6586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.60e-10 | 12 |
fibroblast | 4.48e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.40e-09 | 89 |
neural tube | 7.44e-09 | 56 |
neural rod | 7.44e-09 | 56 |
future spinal cord | 7.44e-09 | 56 |
neural keel | 7.44e-09 | 56 |
central nervous system | 1.53e-08 | 81 |
ectoderm-derived structure | 1.10e-07 | 171 |
ectoderm | 1.10e-07 | 171 |
presumptive ectoderm | 1.10e-07 | 171 |
regional part of nervous system | 1.68e-07 | 53 |
regional part of brain | 1.68e-07 | 53 |
neurectoderm | 5.85e-07 | 86 |