FFCP PHASE1:Hg19::chr15:37392616..37392638,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:37392616..37392638,- to FFCP PHASE1:Hg19::chr15:37392616..37392638,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4212 | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |HGNC=7001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENST00000382766,ENST00000444725,uc001zjo.2,uc001zjp.2,uc001zjr.2,uc001zjs.2_5end | |||
|cluster_id=chr15:37392616..37392638,- | |||
|coexpression_cluster_id=C1403 | |||
|description=CAGE_peak_2_at_MEIS2_5end | |||
|id=chr15:37392616..37392638,- | |||
|ontology_enrichment_celltype=CL:0000057!8.63e-08!75;CL:0002620!1.82e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.03e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.04e-07,23;CL:0000057,1.07e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.71e-14!365;UBERON:0004111!2.34e-13!241;UBERON:0000025!3.89e-11!194;UBERON:0000481!1.39e-10!347;UBERON:0000477!3.51e-09!286;UBERON:0000468!1.13e-08!659;UBERON:0000062!1.17e-08!511;UBERON:0000483!2.26e-08!309;UBERON:0005743!2.56e-08!86;UBERON:0000073!2.61e-08!94;UBERON:0001016!2.61e-08!94;UBERON:0000480!3.33e-08!626;UBERON:0007023!3.33e-08!115;UBERON:0000467!3.45e-08!625;UBERON:0001017!4.48e-08!82;UBERON:0002346!5.96e-08!90;UBERON:0003075!8.35e-08!86;UBERON:0007284!8.35e-08!86;UBERON:0000119!8.93e-08!312;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0001049!3.07e-07!57;UBERON:0005068!3.07e-07!57;UBERON:0006241!3.07e-07!57;UBERON:0007135!3.07e-07!57;UBERON:0000924!3.77e-07!173;UBERON:0006601!3.77e-07!173;UBERON:0004121!5.78e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.48e-12,240;UBERON:0000025,6.51e-10,192;UBERON:0011216,2.96e-08,223;UBERON:0007023,3.20e-08,114;UBERON:0010314,4.36e-08,132;UBERON:0001017,9.07e-08,81;UBERON:0001016,1.45e-07,89;UBERON:0002346,1.68e-07,86;UBERON:0003075,2.27e-07,82;UBERON:0007284,2.27e-07,82;UBERON:0003064,5.42e-07,28;UBERON:0001049,5.54e-07,56;UBERON:0005068,5.54e-07,56;UBERON:0006241,5.54e-07,56;UBERON:0007135,5.54e-07,56;UBERON:0000955,5.68e-07,68;UBERON:0006238,5.68e-07,68 | |||
|phase1_expression=1.45342703416445,2.78330681058278,1.40954404095971,4.00293193412522,8.04529969969118,2.61701557230111,2.53299878168311,2.52687949370732,1.04474251279935,0.491467873003018,0,3.05817920982241,3.16520373874144,0.37129905888014,0.662794751455832,3.36162573225888,1.80808358407193,2.19093027116212,0.487932798790507,2.83178433576612,5.10001728110633,5.95563970808367,13.7393273822907,11.3605772810494,8.16027157366218,6.95361992306356,6.97855010324539,6.69041641166274,0,0,0.619264493264304,0,0.30120591877825,0.369754010166788,0.619737604642413,1.42169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,36.5710299470943,7.37770945674,3.19656404608826,1.44575660953827,0.50133791063589,1.59331170856906,2.3858578411533,1.45990461090791,3.87592750372678,4.87804674417641,3.51339142772504,4.38779902917337,0,0.370784442784429,0,0,0,0,0,0.371457501329565,2.58391129576717,4.30117297553062,5.20710752411391,6.21838736116411,5.87299210693868,4.12677062910101,1.46296476575767,0.775250277507987,1.77883131343355,1.33888245105868,1.20848795132744,0.760272105718513,1.46437234528902,2.20597848207521,2.43042584364528,1.96459402224975,2.69435247151404,2.59006405111641,3.06633274931766,0,1.83201743930407,0,0,1.3082821564276,4.96971951695318,3.92554586160197,2.38336525463794,17.2101972449288,5.32002573297536,9.53151920241922,3.20246987189115,5.18001851676036,11.5148083097914,10.372721749366,11.6057951210556,1.21085942115945,1.15235184896,0.70296429550139,1.24864030732128,1.71141546463335,2.24173020827702,3.75790395660048,5.50368010851647,3.23036855415172,2.24569588380383,1.22834317311768,5.06296327761251,0,0,10.0117749813183,6.46756327634615,1.17835279767846,2.37725187756732,2.21651292387346,0,1.5324389789951,0.751190294532984,4.42385514324082,40.5420576656828,8.11518077510556,9.53693555218028,27.9084719358494,22.4654513739797,41.9954080274376,12.2837125178849,8.94514560878711,15.2976098103082,66.6425164004462,16.6610316542562,2.42469085228218,53.2514388774921,20.5534280384386,7.79978724628243,0.193260853163297,0,0,0.365921118388786,0.265059536642971,1.51052125730374,2.798848485415,0.252320850875628,0,3.12899064659632,3.21620469096443,2.76269842704961,0.928735856063958,5.0531563716871,0.828147600278907,0.842923450390509,0.482022059766964,0.772057809126758,0.653638332277218,0.71181185733329,0.539325232640658,0.196221465125346,1.15424147083917,25.8354409118627,9.81692416624121,4.5273141246454,14.7008711385542,2.53510069643662,4.91413608338813,4.72631925345123,0.441463099414651,2.33678033231916,0.857839051492628,0.658501712451753,0,0.603173834469785,0.277765335475589,1.62904152655162,0,2.88662684050547,1.97081688457631,1.87853910777315,0.577465791044295,0.462985512576611,1.33177906564219,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.581267877027924,0.766765358330422,10.8385912337108,16.2889602924468,23.2207489405665,26.8063113355548,19.8200620479417,0,0,0,3.4214489204541,0.205654985406647,0,0,0.224262168690721,0,0.1466765716419,2.84397774667111,3.57656445851882,1.690605505112,3.45719551560332,5.2003718455683,1.02882949704857,2.83698264046557,0.532844358032199,5.14720777169331,3.25572963234866,4.11620168390384,0.65147236858747,3.55391948742546,2.37585561880029,7.53598442648965,2.61460037580088,9.59740715347748,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.716243852959582,0,0,0,0.385029108839245,7.87693335089637,13.0139853857622,11.5993321916654,11.7261385734044,24.8796113144734,0,0,0,0.858840442033979,1.50051156317903,0,1.87173775377726,1.42743191037729,0.315404830067869,0.585707074963566,1.20378439891088,0,1.03473071292505,2.65690239414175,3.13427586520895,7.03757277191471,0.587403472388222,0,0,0,0.213455115606889,0.606255142892519,0,5.44302527993425,2.72918588600655,4.14347327877769,5.3325417942284,1.15325234330131,4.60536524160033,1.60853921143608,4.45254199334973,4.31787142647436,2.84098760501003,3.03870477251094,2.07701771673448,6.15915005837784,2.77976734060731,2.00506470303285,1.10497186723076,3.67406234126742,4.37018803216121,10.8833264416322,0.451199612907412,0.616122696835318,0,2.92278449306521,0.633309773357254,22.7466768141793,16.839276822375,2.80690690932781,15.4227252690289,3.79325012561394,4.01351819083883,0.254876273045038,0.831076008928724,1.11937377361089,0,0,2.56450125116389,6.23227826829441,1.62689197332152,2.16386124460217,13.0944334690231,7.17832649309115,0.574265537996172,0.650060246036521,6.42735719376638,0.580024309752732,3.85121542786611,6.14014698904518,2.48105830472155,2.90034661144339,3.0453505721988,2.81247870473133,0.623224249527161,0.495854746082934,0.576570202095319,1.40373983744043,0.2023155617111,5.11330104227014,9.75918275174984,2.7881490806424,3.08033580176089,1.59691809095107,1.73986598415015,1.48259375283136,2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| ||
|short_description=p2@MEIS2 | |||
}} | }} |
Latest revision as of 08:30, 17 September 2015
Short description: | p2@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEIS2_5end |
Coexpression cluster: | C1403_occipital_Fibroblast_parietal_normal_duodenum_temporal_Neurons |
Association with transcript: | 65bp_to_ENST00000382766, ENST00000444725, uc001zjo.2, uc001zjp.2, uc001zjr.2, uc001zjs.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.04e-07 | 23 |
fibroblast | 1.07e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.48e-12 | 240 |
tube | 6.51e-10 | 192 |
organ system subdivision | 2.96e-08 | 223 |
adult organism | 3.20e-08 | 114 |
structure with developmental contribution from neural crest | 4.36e-08 | 132 |
central nervous system | 9.07e-08 | 81 |
nervous system | 1.45e-07 | 89 |
neurectoderm | 1.68e-07 | 86 |
neural plate | 2.27e-07 | 82 |
presumptive neural plate | 2.27e-07 | 82 |
intermediate mesoderm | 5.42e-07 | 28 |
neural tube | 5.54e-07 | 56 |
neural rod | 5.54e-07 | 56 |
future spinal cord | 5.54e-07 | 56 |
neural keel | 5.54e-07 | 56 |
brain | 5.68e-07 | 68 |
future brain | 5.68e-07 | 68 |