FFCP PHASE1:Hg19::chr9:36487684..36487695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152006 | |EntrezGene=152006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |HGNC=18052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-139bp_to_ENST00000488058_5end | |association_with_transcript=-139bp_to_ENST00000488058_5end | ||
|cluster_id=chr9:36487684..36487695,- | |||
|description=CAGE_peak_10_at_RNF38_5end | |description=CAGE_peak_10_at_RNF38_5end | ||
|id=chr9:36487684..36487695,- | |id=chr9:36487684..36487695,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.54e-07;10!UBERON:0005564;6.54e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.80e-13!94;UBERON:0001016!4.80e-13!94;UBERON:0005743!1.03e-12!86;UBERON:0001017!2.60e-12!82;UBERON:0007023!4.83e-12!115;UBERON:0002780!8.17e-11!41;UBERON:0001890!8.17e-11!41;UBERON:0006240!8.17e-11!41;UBERON:0001893!1.79e-10!34;UBERON:0001049!2.35e-10!57;UBERON:0005068!2.35e-10!57;UBERON:0006241!2.35e-10!57;UBERON:0007135!2.35e-10!57;UBERON:0003080!3.41e-10!42;UBERON:0001869!4.29e-10!32;UBERON:0003075!5.50e-10!86;UBERON:0007284!5.50e-10!86;UBERON:0000955!5.83e-10!69;UBERON:0006238!5.83e-10!69;UBERON:0002346!6.44e-10!90;UBERON:0002791!6.54e-10!33;UBERON:0002619!2.22e-09!22;UBERON:0002616!2.86e-09!59;UBERON:0002020!2.91e-09!34;UBERON:0003528!2.91e-09!34;UBERON:0001950!7.96e-09!20;UBERON:0000924!9.63e-09!173;UBERON:0006601!9.63e-09!173;UBERON:0004121!1.11e-08!169;UBERON:0003056!2.37e-08!61;UBERON:0000956!6.47e-08!25;UBERON:0000203!6.47e-08!25;UBERON:0000153!2.37e-07!129;UBERON:0007811!2.37e-07!129;UBERON:0000033!6.96e-07!123 | |ontology_enrichment_uberon=UBERON:0000073!4.80e-13!94;UBERON:0001016!4.80e-13!94;UBERON:0005743!1.03e-12!86;UBERON:0001017!2.60e-12!82;UBERON:0007023!4.83e-12!115;UBERON:0002780!8.17e-11!41;UBERON:0001890!8.17e-11!41;UBERON:0006240!8.17e-11!41;UBERON:0001893!1.79e-10!34;UBERON:0001049!2.35e-10!57;UBERON:0005068!2.35e-10!57;UBERON:0006241!2.35e-10!57;UBERON:0007135!2.35e-10!57;UBERON:0003080!3.41e-10!42;UBERON:0001869!4.29e-10!32;UBERON:0003075!5.50e-10!86;UBERON:0007284!5.50e-10!86;UBERON:0000955!5.83e-10!69;UBERON:0006238!5.83e-10!69;UBERON:0002346!6.44e-10!90;UBERON:0002791!6.54e-10!33;UBERON:0002619!2.22e-09!22;UBERON:0002616!2.86e-09!59;UBERON:0002020!2.91e-09!34;UBERON:0003528!2.91e-09!34;UBERON:0001950!7.96e-09!20;UBERON:0000924!9.63e-09!173;UBERON:0006601!9.63e-09!173;UBERON:0004121!1.11e-08!169;UBERON:0003056!2.37e-08!61;UBERON:0000956!6.47e-08!25;UBERON:0000203!6.47e-08!25;UBERON:0000153!2.37e-07!129;UBERON:0007811!2.37e-07!129;UBERON:0000033!6.96e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.29e-07;34!UBERON:0000955;6.01e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.03e-12,114;UBERON:0001017,6.90e-12,81;UBERON:0001016,2.52e-10,89;UBERON:0000955,6.35e-10,68;UBERON:0006238,6.35e-10,68;UBERON:0000073,2.04e-08,53;UBERON:0002616,2.04e-08,53;UBERON:0001893,5.54e-08,34;UBERON:0002780,7.29e-08,41;UBERON:0001890,7.29e-08,41;UBERON:0003080,7.29e-08,41;UBERON:0006240,7.29e-08,41;UBERON:0001049,7.55e-08,56;UBERON:0005068,7.55e-08,56;UBERON:0006241,7.55e-08,56;UBERON:0007135,7.55e-08,56;UBERON:0001869,8.19e-07,32 | |||
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| ||
|short_description=p10@RNF38 | |short_description=p10@RNF38 | ||
}} | }} |
Latest revision as of 09:56, 17 September 2015
Short description: | p10@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RNF38_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000488058_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.03e-12 | 114 |
central nervous system | 6.90e-12 | 81 |
nervous system | 2.52e-10 | 89 |
brain | 6.35e-10 | 68 |
future brain | 6.35e-10 | 68 |
regional part of nervous system | 2.04e-08 | 53 |
regional part of brain | 2.04e-08 | 53 |
telencephalon | 5.54e-08 | 34 |
regional part of forebrain | 7.29e-08 | 41 |
forebrain | 7.29e-08 | 41 |
anterior neural tube | 7.29e-08 | 41 |
future forebrain | 7.29e-08 | 41 |
neural tube | 7.55e-08 | 56 |
neural rod | 7.55e-08 | 56 |
future spinal cord | 7.55e-08 | 56 |
neural keel | 7.55e-08 | 56 |
cerebral hemisphere | 8.19e-07 | 32 |