FFCP PHASE1:Hg19::chr3:191047287..191047298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |EntrezGene=152137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |HGNC=18111 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVM0 | |UniProt=Q8IVM0 | ||
|association_with_transcript=413bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |association_with_transcript=413bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | ||
|cluster_id=chr3:191047287..191047298,+ | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_11_at_CCDC50_5end | |description=CAGE_peak_11_at_CCDC50_5end | ||
|id=chr3:191047287..191047298,+ | |id=chr3:191047287..191047298,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.01e-15;3!CL:0000167;8.62e-12;1!CL:0000164;8.62e-12;1!CL:0000502;8.62e-12;1!CL:0000172;8.62e-12;1!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0000173;8.62e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.68e-15,3;CL:0000167,6.26e-12,1;CL:0000164,6.26e-12,1;CL:0000502,6.26e-12,1;CL:0000172,6.26e-12,1;CL:0000173,6.26e-12,1;CL:0002351,6.26e-12,1;CL:0000228,7.76e-12,1;CL:0002372,7.76e-12,1 | |||
|ontology_enrichment_development_v019=CL:0002351;8.62e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;8.62e-12;1!DOID:4549;8.62e-12;1!DOID:5861;8.62e-12;1!DOID:6496;8.62e-12;1!DOID:12603;8.62e-12;1!DOID:4430;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.05e-12,1;DOID:4430,6.26e-12,1;DOID:3371,8.64e-12,1;DOID:4549,8.64e-12,1;DOID:5861,8.64e-12,1;DOID:6496,8.64e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.24e-10;10!UBERON:0000478;3.05e-07;24!UBERON:0000178;6.77e-07;15!UBERON:0000179;6.77e-07;15!UBERON:0000463;6.77e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.52e-10,10;UBERON:0000358,4.52e-10,10;UBERON:0000307,4.52e-10,10;UBERON:0000091,4.52e-10,10;UBERON:0000087,4.52e-10,10;UBERON:0007010,4.52e-10,10;UBERON:0007806,4.52e-10,10;UBERON:0008780,4.52e-10,10;UBERON:0005728,4.52e-10,10;UBERON:0000478,3.54e-07,24;UBERON:0000178,7.05e-07,15;UBERON:0000179,7.05e-07,15;UBERON:0000463,7.05e-07,15 | |||
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| ||
|short_description=p11@CCDC50 | |short_description=p11@CCDC50 | ||
}} | }} |
Latest revision as of 10:31, 17 September 2015
Short description: | p11@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CCDC50_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | 413bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.68e-15 | 3 |
peptide hormone secreting cell | 6.26e-12 | 1 |
enteroendocrine cell | 6.26e-12 | 1 |
type D enteroendocrine cell | 6.26e-12 | 1 |
somatostatin secreting cell | 6.26e-12 | 1 |
pancreatic D cell | 6.26e-12 | 1 |
progenitor cell of endocrine pancreas | 6.26e-12 | 1 |
multinucleate cell | 7.76e-12 | 1 |
myotube | 7.76e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.52e-10 | 10 |
blastocyst | 4.52e-10 | 10 |
blastula | 4.52e-10 | 10 |
bilaminar disc | 4.52e-10 | 10 |
inner cell mass | 4.52e-10 | 10 |
cleaving embryo | 4.52e-10 | 10 |
connecting stalk | 4.52e-10 | 10 |
inner cell mass derived epiblast | 4.52e-10 | 10 |
extraembryonic mesoderm | 4.52e-10 | 10 |
extraembryonic structure | 3.54e-07 | 24 |
blood | 7.05e-07 | 15 |
haemolymphatic fluid | 7.05e-07 | 15 |
organism substance | 7.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.05e-12 | 1 |
somatostatinoma | 6.26e-12 | 1 |
chondrosarcoma | 8.64e-12 | 1 |
extraosseous chondrosarcoma | 8.64e-12 | 1 |
myxoid chondrosarcoma | 8.64e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 8.64e-12 | 1 |