FFCP PHASE1:Hg19::chr8:22418409..22418450,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:22418409..22418450,+
|short_description=p42@SORBS3
|description=CAGE_peak_42_at_SORBS3_5end
|association_with_transcript=0bp_to_ENST00000518512_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10174 | |EntrezGene=10174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |HGNC=30907 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518512_5end | |||
|cluster_id=chr8:22418409..22418450,+ | |||
|description=CAGE_peak_42_at_SORBS3_5end | |||
|id=chr8:22418409..22418450,+ | |||
|ontology_enrichment_celltype=CL:0000077!5.33e-13!19;CL:0002594!1.14e-09!4;CL:0002166!2.68e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.38e-34;19!CL:0002594;3.65e-19;4!CL:0000313;4.08e-10;1!CL:0000213;3.18e-07;58!CL:0000215;3.18e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.62e-34,19;CL:0002594,5.16e-19,4;CL:0000213,1.91e-10,58;CL:0000215,1.91e-10,58;CL:0000313,4.09e-10,1;CL:0000076,1.64e-09,63;CL:0000222,1.99e-09,121 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.30e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!5.14e-14!14;DOID:193!9.47e-10!29;DOID:120!4.07e-09!27;DOID:162!2.77e-07!235;DOID:14566!6.47e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.08e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.09e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.05e-18!9;UBERON:0001557!4.95e-11!19;UBERON:0001310!1.14e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;3.65e-19;4!UBERON:0004911;4.08e-10;1!UBERON:0000941;1.30e-09;1!UBERON:0001785;1.30e-09;1!UBERON:0002464;1.30e-09;1!UBERON:0004904;1.30e-09;1!UBERON:0001021;1.30e-09;1!UBERON:0010260;7.95e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,5.16e-19,4;UBERON:0004911,4.09e-10,1;UBERON:0000941,1.48e-09,1;UBERON:0001785,1.48e-09,1;UBERON:0002464,1.48e-09,1;UBERON:0004904,1.48e-09,1;UBERON:0001021,1.48e-09,1;UBERON:0003902,1.48e-09,1;UBERON:0005425,1.48e-09,1;UBERON:0010260,9.24e-09,9 | |||
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| ||
|short_description=p42@SORBS3 | |||
}} | }} |
Latest revision as of 11:29, 17 September 2015
Short description: | p42@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_SORBS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518512_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.62e-34 | 19 |
smooth muscle cell of the umbilical artery | 5.16e-19 | 4 |
lining cell | 1.91e-10 | 58 |
barrier cell | 1.91e-10 | 58 |
serous secreting cell | 4.09e-10 | 1 |
squamous epithelial cell | 1.64e-09 | 63 |
mesodermal cell | 1.99e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 5.16e-19 | 4 |
epithelium of female gonad | 4.09e-10 | 1 |
cranial nerve II | 1.48e-09 | 1 |
cranial nerve | 1.48e-09 | 1 |
nerve trunk | 1.48e-09 | 1 |
nerve connecting eye with brain | 1.48e-09 | 1 |
nerve | 1.48e-09 | 1 |
retinal neural layer | 1.48e-09 | 1 |
presumptive neural retina | 1.48e-09 | 1 |
umbilical blood vessel | 9.24e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.09e-10 | 1 |