FFCP PHASE1:Hg19::chr1:155145721..155145795,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200185 | |EntrezGene=200185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28942 | |HGNC=28942 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461136,ENST00000471891,ENST00000480091,ENST00000482246,ENST00000490672,ENST00000492892,ENST00000497317_5end | |association_with_transcript=0bp_to_ENST00000461136,ENST00000471891,ENST00000480091,ENST00000482246,ENST00000490672,ENST00000492892,ENST00000497317_5end | ||
|cluster_id=chr1:155145721..155145795,- | |||
|description=CAGE_peak_1_at_KRTCAP2_5end | |description=CAGE_peak_1_at_KRTCAP2_5end | ||
|id=chr1:155145721..155145795,- | |id=chr1:155145721..155145795,- | ||
|ontology_enrichment_celltype=CL:0000066!2.92e-10!254;CL:0000222!3.81e-09!119;CL:0000055!5.12e-09!180;CL:0000220!2.70e-08!246;CL:0000183!4.07e-08!59;CL:0002321!7.07e-08!248;CL:0000012!7.08e-08!682;CL:0000548!7.38e-08!679;CL:0000004!7.38e-08!679;CL:0000255!7.38e-08!679;CL:0000680!1.48e-07!57;CL:0000056!1.48e-07!57;CL:0000355!1.48e-07!57;CL:0000192!4.91e-07!42;CL:0000514!4.91e-07!42;CL:0000187!6.31e-07!54 | |ontology_enrichment_celltype=CL:0000066!2.92e-10!254;CL:0000222!3.81e-09!119;CL:0000055!5.12e-09!180;CL:0000220!2.70e-08!246;CL:0000183!4.07e-08!59;CL:0002321!7.07e-08!248;CL:0000012!7.08e-08!682;CL:0000548!7.38e-08!679;CL:0000004!7.38e-08!679;CL:0000255!7.38e-08!679;CL:0000680!1.48e-07!57;CL:0000056!1.48e-07!57;CL:0000355!1.48e-07!57;CL:0000192!4.91e-07!42;CL:0000514!4.91e-07!42;CL:0000187!6.31e-07!54 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.02e-10,253;CL:0000222,2.18e-09,121;CL:0002321,4.34e-08,250;CL:0000680,1.63e-07,58;CL:0000056,1.63e-07,58;CL:0000355,1.63e-07,58;CL:0000192,5.66e-07,43;CL:0000514,5.66e-07,43;CL:0000187,6.91e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.15e-12!216;UBERON:0003104!2.88e-12!238;UBERON:0009142!2.88e-12!238;UBERON:0005256!1.23e-09!143;UBERON:0009569!4.83e-09!113;UBERON:0000486!5.59e-09!82;UBERON:0004290!4.41e-08!70;UBERON:0000490!1.39e-07!138;UBERON:0003914!2.31e-07!118;UBERON:0001737!6.12e-07!9;UBERON:0001134!6.70e-07!61;UBERON:0002036!6.70e-07!61;UBERON:0003082!6.70e-07!61;UBERON:0008947!9.26e-07!38;UBERON:0003258!9.26e-07!38 | |ontology_enrichment_uberon=UBERON:0002100!1.15e-12!216;UBERON:0003104!2.88e-12!238;UBERON:0009142!2.88e-12!238;UBERON:0005256!1.23e-09!143;UBERON:0009569!4.83e-09!113;UBERON:0000486!5.59e-09!82;UBERON:0004290!4.41e-08!70;UBERON:0000490!1.39e-07!138;UBERON:0003914!2.31e-07!118;UBERON:0001737!6.12e-07!9;UBERON:0001134!6.70e-07!61;UBERON:0002036!6.70e-07!61;UBERON:0003082!6.70e-07!61;UBERON:0008947!9.26e-07!38;UBERON:0003258!9.26e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.14e-07;9!UBERON:0001557;6.14e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.14e-07;9!UBERON:0001557;6.14e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.63e-14,199;UBERON:0007503,5.07e-10,78;UBERON:0003104,5.24e-10,160;UBERON:0009142,5.24e-10,160;UBERON:0005256,1.12e-09,122;UBERON:0000486,5.99e-09,83;UBERON:0009569,1.02e-08,112;UBERON:0000490,1.09e-08,148;UBERON:0002329,4.76e-08,71;UBERON:0003059,4.76e-08,71;UBERON:0007282,4.76e-08,71;UBERON:0004290,4.76e-08,71;UBERON:0009618,4.76e-08,71;UBERON:0007524,6.38e-08,73;UBERON:0003077,1.40e-07,72;UBERON:0007285,1.40e-07,72;UBERON:0003914,2.29e-07,117;UBERON:0001737,6.12e-07,9;UBERON:0001134,7.19e-07,62;UBERON:0002036,7.19e-07,62;UBERON:0003082,7.19e-07,62;UBERON:0008947,9.26e-07,38;UBERON:0003258,9.26e-07,38 | |||
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| ||
|short_description=p1@KRTCAP2 | |short_description=p1@KRTCAP2 | ||
}} | }} |
Latest revision as of 11:31, 17 September 2015
Short description: | p1@KRTCAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTCAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461136, ENST00000471891, ENST00000480091, ENST00000482246, ENST00000490672, ENST00000492892, ENST00000497317_5end |
EntrezGene: | KRTCAP2 |
HGNC: | 28942 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.02e-10 | 253 |
mesodermal cell | 2.18e-09 | 121 |
embryonic cell | 4.34e-08 | 250 |
muscle precursor cell | 1.63e-07 | 58 |
myoblast | 1.63e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-07 | 58 |
smooth muscle cell | 5.66e-07 | 43 |
smooth muscle myoblast | 5.66e-07 | 43 |
muscle cell | 6.91e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.63e-14 | 199 |
epithelial vesicle | 5.07e-10 | 78 |
mesenchyme | 5.24e-10 | 160 |
entire embryonic mesenchyme | 5.24e-10 | 160 |
trunk mesenchyme | 1.12e-09 | 122 |
multilaminar epithelium | 5.99e-09 | 83 |
subdivision of trunk | 1.02e-08 | 112 |
unilaminar epithelium | 1.09e-08 | 148 |
somite | 4.76e-08 | 71 |
presomitic mesoderm | 4.76e-08 | 71 |
presumptive segmental plate | 4.76e-08 | 71 |
dermomyotome | 4.76e-08 | 71 |
trunk paraxial mesoderm | 4.76e-08 | 71 |
dense mesenchyme tissue | 6.38e-08 | 73 |
paraxial mesoderm | 1.40e-07 | 72 |
presumptive paraxial mesoderm | 1.40e-07 | 72 |
epithelial tube | 2.29e-07 | 117 |
larynx | 6.12e-07 | 9 |
skeletal muscle tissue | 7.19e-07 | 62 |
striated muscle tissue | 7.19e-07 | 62 |
myotome | 7.19e-07 | 62 |
respiratory primordium | 9.26e-07 | 38 |
endoderm of foregut | 9.26e-07 | 38 |