FFCP PHASE1:Hg19::chr1:31205401..31205420,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29612 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AF401210_5end | |||
|cluster_id=chr1:31205401..31205420,- | |||
|description=CAGE_peak_4_at_LAPTM5_5end | |||
|id=chr1:31205401..31205420,- | |||
|ontology_enrichment_celltype=CL:0000037!3.62e-74!172;CL:0000566!3.62e-74!172;CL:0000988!2.99e-72!182;CL:0002032!5.48e-70!165;CL:0000837!5.48e-70!165;CL:0000738!3.00e-68!140;CL:0002031!9.72e-60!124;CL:0002087!1.77e-58!119;CL:0000763!7.43e-52!112;CL:0000049!7.43e-52!112;CL:0000766!1.29e-48!76;CL:0002057!3.58e-47!42;CL:0000557!1.49e-44!71;CL:0000839!1.33e-43!70;CL:0000860!6.06e-43!45;CL:0002009!2.11e-40!65;CL:0002194!2.24e-40!63;CL:0000576!2.24e-40!63;CL:0000040!2.24e-40!63;CL:0000559!2.24e-40!63;CL:0000134!2.58e-18!358;CL:0002320!2.49e-17!365;CL:0000838!1.08e-15!52;CL:0000542!3.32e-15!53;CL:0000051!3.32e-15!53;CL:0000219!2.16e-14!390;CL:0000048!3.12e-11!430;CL:0000723!1.18e-10!436;CL:0000034!2.52e-10!444;CL:0000945!2.03e-09!24;CL:0000826!2.03e-09!24;CL:0002393!3.44e-08!9;CL:0002397!3.44e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.05e-60;33!CL:0002057;7.05e-60;33!CL:0000473;1.61e-45;39!CL:0000234;1.61e-45;39!CL:0000576;1.69e-32;48!CL:0000766;2.03e-28;69!CL:0002087;7.17e-17;104!CL:0000738;1.49e-15;136!CL:0000763;7.83e-13;100!CL:0000775;6.56e-11;3!CL:0000988;5.04e-10;177!CL:0000623;1.28e-09;3!CL:0000226;2.45e-09;3!CL:0000842;2.45e-09;3!CL:0000542;2.71e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.03e-62,42;CL:0002057,4.03e-62,42;CL:0000738,4.85e-62,136;CL:0000473,3.46e-57,48;CL:0000234,3.46e-57,48;CL:0002087,2.88e-56,115;CL:0000766,6.97e-54,72;CL:0002031,2.81e-53,120;CL:0000037,1.48e-51,168;CL:0000988,2.97e-48,177;CL:0002032,3.83e-48,161;CL:0000837,3.83e-48,161;CL:0000839,1.55e-46,66;CL:0000557,1.04e-45,67;CL:0002194,5.98e-44,59;CL:0000576,5.98e-44,59;CL:0000040,5.98e-44,59;CL:0000559,5.98e-44,59;CL:0002009,3.04e-42,61;CL:0000763,2.08e-36,108;CL:0000049,2.08e-36,108;CL:0000134,2.71e-17,354;CL:0002320,1.08e-16,361;CL:0000219,1.43e-14,386;CL:0000048,5.52e-12,427;CL:0000723,1.25e-11,433;CL:0000034,3.62e-11,441;CL:0000775,6.59e-11,3;CL:0000838,7.31e-11,52;CL:0000542,1.38e-10,53;CL:0000051,1.38e-10,53;CL:0000623,8.87e-10,3;CL:0000825,8.87e-10,3;CL:0000226,2.65e-09,3;CL:0000842,2.65e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-44;42!CL:0000049;4.35e-12;108!CL:0000051;2.71e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!8.09e-11!51;DOID:0060083!8.09e-11!51;DOID:1240!2.93e-08!39;DOID:8692!1.85e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-48!102;UBERON:0003061!1.10e-48!102;UBERON:0002193!9.91e-45!112;UBERON:0002371!2.64e-37!80;UBERON:0001474!1.54e-34!86;UBERON:0002405!7.65e-28!115;UBERON:0004765!1.62e-26!101;UBERON:0001434!1.62e-26!101;UBERON:0002384!1.65e-16!375;UBERON:0003081!1.34e-13!216;UBERON:0002204!3.10e-10!167;UBERON:0000178!3.36e-08!15;UBERON:0000179!3.36e-08!15;UBERON:0000463!3.36e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-43,98;UBERON:0003061,6.74e-43,98;UBERON:0002371,3.06e-39,76;UBERON:0002193,6.02e-38,108;UBERON:0001474,1.04e-35,82;UBERON:0002405,1.99e-32,93;UBERON:0004765,9.84e-32,90;UBERON:0001434,1.18e-27,100;UBERON:0002384,7.18e-16,371;UBERON:0003081,2.90e-15,203;UBERON:0002204,5.39e-13,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.393553906568396,0,0,0.619264493264304,0,0,0,1.39440961044543,1.70603078984906,0,0.553995408531877,5.61524452916397,2.82114131930607,0,0.647787332037959,0.515151135268373,4.21654892460738,3.77875943688809,3.88134497900506,3.48643555358527,2.87817521615278,7.74265927237759,0.863077176966451,2.0492856522328,1.41889337933151,2.75796544589295,1.93645405075148,1.35426486594342,5.27078550719293,4.36649840092553,1.34834090667051,5.20342617030534,1.92557416245656,3.83602275479425,2.30895910130701,4.9865914405408,3.83602275479425,1.16083695451434,1.70215567407342,5.60540024096017,4.52247597462138,8.86520961314342,2.38907729175628,0.605399502633369,0.736555271975129,0.632924774881769,0.845021145247767,1.4882300997553,0.209658645508376,0.898629049171961,1.05123824989054,2.08943262706204,0,0.99458338599545,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,12.5226853204079,12.9192181661607,9.55683070313072,0,0,0.263384084775077,1.57367816091066,3.14408610199332,2.67281948699362,0,0.32592226663359,0,0,0.222820913770347,0,0.443067789167242,0,2.5618263945135,1.43065282315866,0.986627427622057,2.21080014228679,0,0.14828656316206,0.267540828089713,1.04535523804977,0.679856056185397,0,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,1.41124720257313,2.94184215361858,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,0,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.936017060556951,0.594524649154913,0,0,0,0,0,0,1.97065295158377,1.49682337822484,0.621984346622316,1.00883967391873,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0.112085143993527,1.77327684181734,2.80315847317372,3.33691894327346,0.254094624222463,0,0,0,0,14.9801404789436,20.9413021442817,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,1.42939065274673,0.822724546172388,1.29694662238543,0,0.79312517629427,0,0,0,0,0.28853842595289,0,0,0.399158742865633,0.383010740264733,0.846694330895531,0,0.842391534340376,0.684704037099577,0.156679895773023,0,0,0.321176150207399,0.403599414382095,0.425846237690326,0,0.614481528616916,0,0,0.390776190804081,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,2.33861130376032,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.784901281975124,0.166211681900156,0,0,0,0.37950746544837,0.635746315921515,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0.63186579628488,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.345701962667338,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.187967835959707,0.128915775947154,1.69899965072379,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p4@LAPTM5 | |||
}} |
Latest revision as of 11:58, 17 September 2015
Short description: | p4@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAPTM5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF401210_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.74e-43 | 98 |
blood island | 6.74e-43 | 98 |
bone marrow | 3.06e-39 | 76 |
hemolymphoid system | 6.02e-38 | 108 |
bone element | 1.04e-35 | 82 |
immune system | 1.99e-32 | 93 |
skeletal element | 9.84e-32 | 90 |
skeletal system | 1.18e-27 | 100 |
connective tissue | 7.18e-16 | 371 |
lateral plate mesoderm | 2.90e-15 | 203 |
musculoskeletal system | 5.39e-13 | 167 |