FFCP PHASE1:Hg19::chr6:2876961..2876997,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221756 | |EntrezGene=221756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-217bp_to_ENST00000420981,ENST00000545177,NR_033851,uc003mud.2_5end | |association_with_transcript=-217bp_to_ENST00000420981,ENST00000545177,NR_033851,uc003mud.2_5end | ||
|cluster_id=chr6:2876961..2876997,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_4_at_MGC39372_5end | |description=CAGE_peak_4_at_MGC39372_5end | ||
|id=chr6:2876961..2876997,- | |id=chr6:2876961..2876997,- | ||
|ontology_enrichment_celltype=CL:0000860;4.12e-121;33!CL:0002057;4.12e-121;33!CL:0000473;2.84e-83;39!CL:0000234;2.84e-83;39!CL:0000576;7.26e-67;48!CL:0000766;1.08e-42;69!CL:0002087;3.01e-19;104!CL:0000763;6.87e-18;100!CL:0000738;1.17e-11;136!CL:0002393;6.56e-09;6!CL:0002397;6.56e-09;6 | |ontology_enrichment_celltype=CL:0002057!2.05e-77!42;CL:0000860!2.98e-75!45;CL:0002009!2.30e-50!65;CL:0002194!1.89e-49!63;CL:0000576!1.89e-49!63;CL:0000040!1.89e-49!63;CL:0000559!1.89e-49!63;CL:0000766!1.48e-46!76;CL:0000557!3.47e-45!71;CL:0000839!1.94e-43!70;CL:0000738!1.05e-35!140;CL:0002087!5.86e-35!119;CL:0000763!8.45e-33!112;CL:0000049!8.45e-33!112;CL:0002031!1.04e-29!124;CL:0000037!9.46e-28!172;CL:0000566!9.46e-28!172;CL:0000988!1.90e-25!182;CL:0002032!2.12e-25!165;CL:0000837!2.12e-25!165;CL:0000842!5.52e-08!3;CL:0000134!5.83e-08!358;CL:0002320!1.46e-07!365;CL:0000219!4.35e-07!390;CL:0002393!5.93e-07!9;CL:0002397!5.93e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;4.12e-121;33!CL:0002057;4.12e-121;33!CL:0000473;2.84e-83;39!CL:0000234;2.84e-83;39!CL:0000576;7.26e-67;48!CL:0000766;1.08e-42;69!CL:0002087;3.01e-19;104!CL:0000763;6.87e-18;100!CL:0000738;1.17e-11;136!CL:0002393;6.56e-09;6!CL:0002397;6.56e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.98e-128,42;CL:0002057,6.98e-128,42;CL:0000473,3.74e-111,48;CL:0000234,3.74e-111,48;CL:0002194,1.00e-87,59;CL:0000576,1.00e-87,59;CL:0000040,1.00e-87,59;CL:0000559,1.00e-87,59;CL:0002009,1.06e-84,61;CL:0000766,1.51e-80,72;CL:0000839,6.26e-78,66;CL:0000557,1.08e-76,67;CL:0000763,6.75e-52,108;CL:0000049,6.75e-52,108;CL:0002087,2.34e-45,115;CL:0000738,1.18e-42,136;CL:0002031,2.02e-40,120;CL:0000037,2.25e-33,168;CL:0002032,7.43e-33,161;CL:0000837,7.43e-33,161;CL:0000988,2.31e-31,177;CL:0000134,1.88e-12,354;CL:0002320,4.40e-12,361;CL:0000219,8.91e-11,386;CL:0000034,2.15e-10,441;CL:0000048,3.55e-09,427;CL:0000723,5.92e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-94;42!CL:0000049;2.33e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.28e-39!80;UBERON:0002390!4.53e-37!102;UBERON:0003061!4.53e-37!102;UBERON:0002193!3.93e-36!112;UBERON:0001474!2.21e-35!86;UBERON:0004765!1.72e-28!101;UBERON:0001434!1.72e-28!101;UBERON:0002405!4.89e-28!115;UBERON:0003081!2.71e-21!216;UBERON:0002204!7.67e-15!167;UBERON:0000926!3.81e-07!448;UBERON:0004120!3.81e-07!448;UBERON:0006603!3.81e-07!448;UBERON:0002384!5.09e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.06e-67,76;UBERON:0001474,9.75e-62,82;UBERON:0004765,8.97e-56,90;UBERON:0002390,3.27e-54,98;UBERON:0003061,3.27e-54,98;UBERON:0002405,8.48e-54,93;UBERON:0001434,1.21e-49,100;UBERON:0002193,1.14e-48,108;UBERON:0002204,2.27e-27,167;UBERON:0003081,4.54e-23,203;UBERON:0000926,1.33e-12,315;UBERON:0004120,1.33e-12,315;UBERON:0006603,1.33e-12,315;UBERON:0002384,1.41e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,0,2.30297638858328,0.928896739896456,0,0,0,0.0774672005803016,0,0,9.97191735357379,6.81851121398482,6.2933152507597,0,0,0,1.16318591023652,1.13362783106643,0.242584061187816,3.71886459049095,1.6446715520873,3.40677007984614,8.91846416198666,8.45330331546032,8.0403958162119,24.4769433322999,12.2642089880927,13.5426486594342,1.50593871634084,1.36453075028923,2.69668181334102,20.8137046812214,19.2557416245656,21.0981251513684,2.30895910130701,3.98927315243264,1.27867425159808,14.2202526928006,11.9150897185139,6.22822248995575,4.01997864410789,4.17186334736161,4.56096573880745,13.3187890579341,19.5187147073409,12.3420331101945,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,0,2.30297638858328,0.928896739896456,0,0,0,0.0774672005803016,0,0,9.97191735357379,6.81851121398482,6.2933152507597,0,0,0,1.16318591023652,1.13362783106643,0.242584061187816,3.71886459049095,1.6446715520873,3.40677007984614,8.91846416198666,8.45330331546032,8.0403958162119,24.4769433322999,12.2642089880927,13.5426486594342,1.50593871634084,1.36453075028923,2.69668181334102,20.8137046812214,19.2557416245656,21.0981251513684,2.30895910130701,3.98927315243264,1.27867425159808,14.2202526928006,11.9150897185139,6.22822248995575,4.01997864410789,4.17186334736161,4.56096573880745,13.3187890579341,19.5187147073409,12.3420331101945,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@MGC39372 | |short_description=p4@MGC39372 | ||
}} | }} |
Latest revision as of 13:19, 17 September 2015
Short description: | p4@MGC39372 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MGC39372_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -217bp_to_ENST00000420981, ENST00000545177, NR_033851, uc003mud.2_5end |
EntrezGene: | MGC39372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.98e-128 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.98e-128 | 42 |
defensive cell | 3.74e-111 | 48 |
phagocyte | 3.74e-111 | 48 |
monopoietic cell | 1.00e-87 | 59 |
monocyte | 1.00e-87 | 59 |
monoblast | 1.00e-87 | 59 |
promonocyte | 1.00e-87 | 59 |
macrophage dendritic cell progenitor | 1.06e-84 | 61 |
myeloid leukocyte | 1.51e-80 | 72 |
myeloid lineage restricted progenitor cell | 6.26e-78 | 66 |
granulocyte monocyte progenitor cell | 1.08e-76 | 67 |
myeloid cell | 6.75e-52 | 108 |
common myeloid progenitor | 6.75e-52 | 108 |
nongranular leukocyte | 2.34e-45 | 115 |
leukocyte | 1.18e-42 | 136 |
hematopoietic lineage restricted progenitor cell | 2.02e-40 | 120 |
hematopoietic stem cell | 2.25e-33 | 168 |
hematopoietic oligopotent progenitor cell | 7.43e-33 | 161 |
hematopoietic multipotent progenitor cell | 7.43e-33 | 161 |
hematopoietic cell | 2.31e-31 | 177 |
mesenchymal cell | 1.88e-12 | 354 |
connective tissue cell | 4.40e-12 | 361 |
motile cell | 8.91e-11 | 386 |
stem cell | 2.15e-10 | 441 |
multi fate stem cell | 3.55e-09 | 427 |
somatic stem cell | 5.92e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.06e-67 | 76 |
bone element | 9.75e-62 | 82 |
skeletal element | 8.97e-56 | 90 |
hematopoietic system | 3.27e-54 | 98 |
blood island | 3.27e-54 | 98 |
immune system | 8.48e-54 | 93 |
skeletal system | 1.21e-49 | 100 |
hemolymphoid system | 1.14e-48 | 108 |
musculoskeletal system | 2.27e-27 | 167 |
lateral plate mesoderm | 4.54e-23 | 203 |
mesoderm | 1.33e-12 | 315 |
mesoderm-derived structure | 1.33e-12 | 315 |
presumptive mesoderm | 1.33e-12 | 315 |
connective tissue | 1.41e-11 | 371 |