FFCP PHASE1:Hg19::chr17:74463711..74463736,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=15 | |EntrezGene=15 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19 | |HGNC=19 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_uc002jro.2_5end | |association_with_transcript=60bp_to_uc002jro.2_5end | ||
|cluster_id=chr17:74463711..74463736,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_2_at_AANAT_5end | |description=CAGE_peak_2_at_AANAT_5end | ||
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|ontology_enrichment_celltype=CL:0000064!3.01e-11!3;CL:0005012!3.01e-11!3;CL:0000067!3.01e-11!3;CL:0002304!3.01e-11!3;CL:0002322!4.03e-07!5 | |ontology_enrichment_celltype=CL:0000064!3.01e-11!3;CL:0005012!3.01e-11!3;CL:0000067!3.01e-11!3;CL:0002304!3.01e-11!3;CL:0002322!4.03e-07!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.91e-27;3!UBERON:0006238;3.03e-08;10 | |ontology_enrichment_development_v019=UBERON:0003056;2.91e-27;3!UBERON:0006238;3.03e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.24e-07;11 | |ontology_enrichment_disease_v019=DOID:3093;1.24e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.24e-07,11 | |||
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|short_description=p2@AANAT | |short_description=p2@AANAT | ||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p2@AANAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AANAT_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 60bp_to_uc002jro.2_5end |
EntrezGene: | AANAT |
HGNC: | 19 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.99e-41 | 2 |
regional part of epithalamus | 3.99e-41 | 2 |
secretory circumventricular organ | 3.99e-41 | 2 |
circumventricular organ | 3.99e-41 | 2 |
epithalamus | 3.99e-41 | 2 |
gland of diencephalon | 3.82e-21 | 4 |
neuroendocrine gland | 3.82e-21 | 4 |
regional part of diencephalon | 3.82e-21 | 4 |
retina | 3.71e-14 | 6 |
photoreceptor array | 3.71e-14 | 6 |
posterior segment of eyeball | 3.71e-14 | 6 |
diencephalon | 1.59e-12 | 7 |
future diencephalon | 1.59e-12 | 7 |
meninx | 3.02e-11 | 2 |
membrane organ | 3.02e-11 | 2 |
meningeal cluster | 3.02e-11 | 2 |
eye | 3.85e-09 | 21 |
visual system | 3.85e-09 | 21 |
sense organ | 4.52e-08 | 24 |
sensory system | 4.52e-08 | 24 |
entire sense organ system | 4.52e-08 | 24 |
nervous system | 9.91e-08 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.24e-07 | 11 |