FFCP PHASE1:Hg19::chr8:24262894..24262908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27299 | |EntrezGene=27299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16299 | |HGNC=16299 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000519953_5end | |association_with_transcript=89bp_to_ENST00000519953_5end | ||
|cluster_id=chr8:24262894..24262908,+ | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_6_at_ADAMDEC1_5end | |description=CAGE_peak_6_at_ADAMDEC1_5end | ||
|id=chr8:24262894..24262908,+ | |id=chr8:24262894..24262908,+ | ||
|ontology_enrichment_celltype=CL:0002619;1.07e-40;3!CL:0000235;1.52e-20;6 | |ontology_enrichment_celltype=CL:0002194!7.11e-31!63;CL:0000576!7.11e-31!63;CL:0000040!7.11e-31!63;CL:0000559!7.11e-31!63;CL:0002009!8.31e-30!65;CL:0000839!2.12e-27!70;CL:0000557!5.84e-27!71;CL:0000766!6.31e-25!76;CL:0002619!1.73e-18!3;CL:0002057!1.44e-16!42;CL:0002087!4.24e-16!119;CL:0000763!1.33e-15!112;CL:0000049!1.33e-15!112;CL:0000860!2.63e-15!45;CL:0002031!2.83e-15!124;CL:0000235!2.75e-14!10;CL:0000738!4.97e-13!140;CL:0002032!2.14e-10!165;CL:0000837!2.14e-10!165;CL:0000037!8.51e-10!172;CL:0000566!8.51e-10!172;CL:0000988!5.08e-09!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0002619;1.07e-40;3!CL:0000235;1.52e-20;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,9.96e-41,3;CL:0000235,1.86e-20,6;CL:0002194,2.27e-13,59;CL:0000576,2.27e-13,59;CL:0000040,2.27e-13,59;CL:0000559,2.27e-13,59;CL:0002009,6.48e-13,61;CL:0000839,6.79e-12,66;CL:0000557,1.04e-11,67;CL:0000766,7.45e-11,72;CL:0000763,5.29e-07,108;CL:0000049,5.29e-07,108;CL:0000473,8.23e-07,48;CL:0000234,8.23e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000160;3.53e-26;17!UBERON:0005409;1.89e-20;22!UBERON:0000059;9.44e-20;11!UBERON:0001155;5.65e-14;9!UBERON:0004921;6.78e-13;33!UBERON:0002108;2.17e-11;4 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.76e-23!80;UBERON:0001474!1.46e-21!86;UBERON:0002390!1.71e-19!102;UBERON:0003061!1.71e-19!102;UBERON:0002193!2.99e-19!112;UBERON:0002405!1.25e-18!115;UBERON:0004765!9.43e-18!101;UBERON:0001434!9.43e-18!101;UBERON:0000059!4.24e-13!11;UBERON:0000160!5.06e-12!27;UBERON:0005409!2.35e-11!35;UBERON:0001155!1.66e-10!9;UBERON:0002204!2.84e-10!167;UBERON:0003081!8.29e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.53e-26;17!UBERON:0005409;1.89e-20;22!UBERON:0000059;9.44e-20;11!UBERON:0001155;5.65e-14;9!UBERON:0004921;6.78e-13;33!UBERON:0002108;2.17e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-26,17;UBERON:0000059,8.17e-20,11;UBERON:0005409,4.05e-18,25;UBERON:0001155,4.95e-14,9;UBERON:0002108,2.06e-11,4;UBERON:0002371,3.00e-10,76;UBERON:0001474,1.88e-09,82;UBERON:0004765,1.50e-08,90;UBERON:0002405,2.98e-08,93;UBERON:0002390,8.57e-08,98;UBERON:0003061,8.57e-08,98;UBERON:0001434,1.27e-07,100;UBERON:0002193,5.29e-07,108 | |||
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|short_description=p6@ADAMDEC1 | |short_description=p6@ADAMDEC1 | ||
}} | }} |
Latest revision as of 15:18, 17 September 2015
Short description: | p6@ADAMDEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADAMDEC1_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 89bp_to_ENST00000519953_5end |
EntrezGene: | ADAMDEC1 |
HGNC: | 16299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 9.96e-41 | 3 |
macrophage | 1.86e-20 | 6 |
monopoietic cell | 2.27e-13 | 59 |
monocyte | 2.27e-13 | 59 |
monoblast | 2.27e-13 | 59 |
promonocyte | 2.27e-13 | 59 |
macrophage dendritic cell progenitor | 6.48e-13 | 61 |
myeloid lineage restricted progenitor cell | 6.79e-12 | 66 |
granulocyte monocyte progenitor cell | 1.04e-11 | 67 |
myeloid leukocyte | 7.45e-11 | 72 |
myeloid cell | 5.29e-07 | 108 |
common myeloid progenitor | 5.29e-07 | 108 |
defensive cell | 8.23e-07 | 48 |
phagocyte | 8.23e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.96e-26 | 17 |
large intestine | 8.17e-20 | 11 |
gastrointestinal system | 4.05e-18 | 25 |
colon | 4.95e-14 | 9 |
small intestine | 2.06e-11 | 4 |
bone marrow | 3.00e-10 | 76 |
bone element | 1.88e-09 | 82 |
skeletal element | 1.50e-08 | 90 |
immune system | 2.98e-08 | 93 |
hematopoietic system | 8.57e-08 | 98 |
blood island | 8.57e-08 | 98 |
skeletal system | 1.27e-07 | 100 |
hemolymphoid system | 5.29e-07 | 108 |