FFCP PHASE1:Hg19::chr11:32112576..32112600,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:32112576..32112600,+ to FFCP PHASE1:Hg19::chr11:32112576..32112600,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5954 | |EntrezGene=5954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |HGNC=9934 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNT6 | |UniProt=E9PNT6 | ||
|association_with_transcript=-20bp_to_ENST00000400416_5end | |||
|cluster_id=chr11:32112576..32112600,+ | |||
|coexpression_cluster_id=C3142 | |||
|description=CAGE_peak_3_at_RCN1_5end | |||
|id=chr11:32112576..32112600,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.67e-36!180;CL:0000222!1.06e-22!119;CL:0002321!2.33e-17!248;CL:0000220!3.01e-17!246;CL:0000057!1.82e-15!75;CL:0000680!2.35e-15!57;CL:0000056!2.35e-15!57;CL:0000355!2.35e-15!57;CL:0000187!4.11e-15!54;CL:0000183!1.23e-14!59;CL:0000393!1.83e-14!60;CL:0000211!1.83e-14!60;CL:0000548!1.94e-14!679;CL:0000004!1.94e-14!679;CL:0000255!1.94e-14!679;CL:0000012!5.76e-14!682;CL:0000192!9.70e-13!42;CL:0000514!9.70e-13!42;CL:0000144!2.00e-10!625;CL:0002139!7.23e-10!24;CL:0000359!8.14e-10!32;CL:0002078!5.72e-08!44;CL:0000213!1.08e-07!57;CL:0000215!1.08e-07!57;CL:0002371!2.22e-07!591;CL:0000071!3.68e-07!18;CL:0002546!3.68e-07!18;CL:0000115!6.11e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.71e-10;24!CL:0000192;9.50e-10;43!CL:0000359;2.30e-09;32!CL:0000187;5.06e-09;55!CL:0000393;5.67e-08;61!CL:0000211;5.67e-08;61!CL:0000723;1.24e-07;61!CL:0000134;1.79e-07;55!CL:0000071;2.85e-07;18!CL:0000048;5.77e-07;58!CL:0000057;6.50e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.67e-24,121;CL:0002321,9.50e-17,250;CL:0000057,1.56e-16,76;CL:0000680,2.18e-16,58;CL:0000056,2.18e-16,58;CL:0000355,2.18e-16,58;CL:0000187,3.82e-16,55;CL:0000393,1.88e-15,61;CL:0000211,1.88e-15,61;CL:0000192,1.55e-13,43;CL:0000514,1.55e-13,43;CL:0002139,4.17e-10,24;CL:0000359,4.71e-10,32;CL:0002078,3.45e-08,45;CL:0000213,6.42e-08,58;CL:0000215,6.42e-08,58;CL:0000071,2.54e-07,18;CL:0002546,2.54e-07,18;CL:0000115,3.99e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;9.50e-10;43!CL:0000355;1.07e-08;58!CL:0002546;2.85e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!5.15e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.65e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.36e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.12e-21!79;UBERON:0007798!2.12e-21!79;UBERON:0000055!7.15e-17!69;UBERON:0000914!4.19e-16!83;UBERON:0002329!4.19e-16!83;UBERON:0003077!4.19e-16!83;UBERON:0003059!4.19e-16!83;UBERON:0007282!4.19e-16!83;UBERON:0009618!4.19e-16!83;UBERON:0007285!4.19e-16!83;UBERON:0004290!2.67e-15!70;UBERON:0004872!1.78e-14!84;UBERON:0001981!2.31e-14!60;UBERON:0007500!2.31e-14!60;UBERON:0004537!2.31e-14!60;UBERON:0006965!2.31e-14!60;UBERON:0000486!7.12e-14!82;UBERON:0000490!7.48e-14!138;UBERON:0001134!1.18e-13!61;UBERON:0002036!1.18e-13!61;UBERON:0003082!1.18e-13!61;UBERON:0004535!1.39e-13!110;UBERON:0005256!1.85e-13!143;UBERON:0002385!1.37e-12!63;UBERON:0001015!1.37e-12!63;UBERON:0000383!1.37e-12!63;UBERON:0001009!1.58e-12!113;UBERON:0003914!8.05e-12!118;UBERON:0001637!1.64e-11!42;UBERON:0003509!1.64e-11!42;UBERON:0004572!1.64e-11!42;UBERON:0000119!1.41e-10!312;UBERON:0000483!2.37e-10!309;UBERON:0002100!1.09e-09!216;UBERON:0004573!1.94e-09!33;UBERON:0004571!1.94e-09!33;UBERON:0000477!2.30e-08!286;UBERON:0000947!5.66e-08!21;UBERON:0010191!5.66e-08!21;UBERON:0000481!1.01e-07!347;UBERON:0000475!1.43e-07!365;UBERON:0001986!3.68e-07!18;UBERON:0004638!3.68e-07!18;UBERON:0004852!3.68e-07!18;UBERON:0003104!3.74e-07!238;UBERON:0009142!3.74e-07!238;UBERON:0006914!8.10e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;8.14e-10;75!UBERON:0007798;8.14e-10;75!UBERON:0000055;3.51e-09;65!UBERON:0004573;3.82e-09;33!UBERON:0004571;3.82e-09;33!UBERON:0007500;7.54e-09;56!UBERON:0001981;7.54e-09;56!UBERON:0004537;7.54e-09;56!UBERON:0001637;1.08e-08;42!UBERON:0003509;1.08e-08;42!UBERON:0004572;1.08e-08;42!UBERON:0000947;3.76e-08;21!UBERON:0010191;3.76e-08;21!UBERON:0004638;2.85e-07;18!UBERON:0001986;2.85e-07;18!UBERON:0004852;2.85e-07;18!UBERON:0006914;8.17e-07;25 | |||
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| ||
|short_description=p3@RCN1 | |||
}} | }} |
Latest revision as of 15:19, 17 September 2015
Short description: | p3@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RCN1_5end |
Coexpression cluster: | C3142_Smooth_mesenchymal_small_Sertoli_Lens_Fibroblast_anaplastic |
Association with transcript: | -20bp_to_ENST00000400416_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | E9PNT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.67e-24 | 121 |
embryonic cell | 9.50e-17 | 250 |
fibroblast | 1.56e-16 | 76 |
muscle precursor cell | 2.18e-16 | 58 |
myoblast | 2.18e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-16 | 58 |
muscle cell | 3.82e-16 | 55 |
electrically responsive cell | 1.88e-15 | 61 |
electrically active cell | 1.88e-15 | 61 |
smooth muscle cell | 1.55e-13 | 43 |
smooth muscle myoblast | 1.55e-13 | 43 |
endothelial cell of vascular tree | 4.17e-10 | 24 |
vascular associated smooth muscle cell | 4.71e-10 | 32 |
meso-epithelial cell | 3.45e-08 | 45 |
lining cell | 6.42e-08 | 58 |
barrier cell | 6.42e-08 | 58 |
blood vessel endothelial cell | 2.54e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.54e-07 | 18 |
endothelial cell | 3.99e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.36e-08 | 14 |