FFCP PHASE1:Hg19::chr12:15942663..15942693,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:15942663..15942693,-
|short_description=p8@EPS8
|description=CAGE_peak_8_at_EPS8_5end
|association_with_transcript=-153bp_to_ENST00000281172,ENST000005432...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2059 | |EntrezGene=2059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3420 | |HGNC=3420 | ||
|TSSclassifier=strong | |||
|UniProt=Q12929,F5H819,B4E3T6 | |UniProt=Q12929,F5H819,B4E3T6 | ||
|association_with_transcript=-153bp_to_ENST00000281172,ENST00000543223,NM_004447,uc001rdb.2,uc009zig.2_5end | |||
|cluster_id=chr12:15942663..15942693,- | |||
|description=CAGE_peak_8_at_EPS8_5end | |||
|id=chr12:15942663..15942693,- | |||
|ontology_enrichment_celltype=CL:0000055!4.45e-13!180;CL:0000057!5.60e-11!75;CL:0000136!3.13e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000680;1.50e-09;7!CL:0000327;9.10e-09;15!CL:0000136;2.74e-08;13!CL:0000188;2.17e-07;9!CL:0000708;2.47e-07;3!CL:0002590;9.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.10e-11,15;CL:0000327,7.22e-09,15;CL:0000708,2.35e-07,3;CL:0000188,3.03e-07,9;CL:0002590,5.56e-07,3;CL:0000680,7.51e-07,58;CL:0000056,7.51e-07,58;CL:0000355,7.51e-07,58;CL:0000594,9.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.21e-11!365;UBERON:0000481!1.29e-11!347;UBERON:0005256!1.01e-09!143;UBERON:0002100!1.42e-08!216;UBERON:0003104!2.34e-08!238;UBERON:0009142!2.34e-08!238;UBERON:0000468!2.63e-07!659;UBERON:0007100!3.01e-07!27;UBERON:0002385!8.43e-07!63;UBERON:0001015!8.43e-07!63;UBERON:0000383!8.43e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.77e-12;16!UBERON:0002036;3.77e-12;16!UBERON:0005284;9.51e-11;5!UBERON:0004905;2.76e-08;8!UBERON:0000982;2.76e-08;8!UBERON:0004770;2.76e-08;8!UBERON:0006876;4.33e-08;11!UBERON:0007100;8.89e-08;25!UBERON:0000948;1.08e-07;22!UBERON:0001013;1.53e-07;14!UBERON:0004457;2.17e-07;9!UBERON:0000042;2.17e-07;9!UBERON:0003210;2.47e-07;3!UBERON:0002385;3.61e-07;31!UBERON:0001015;3.61e-07;31!UBERON:0000383;3.61e-07;31!UBERON:0011135;7.70e-07;5!UBERON:0002216;7.70e-07;5!UBERON:0011134;7.70e-07;5!UBERON:0002209;7.70e-07;5!UBERON:0002213;7.70e-07;5!UBERON:0007844;7.70e-07;5!UBERON:0011138;7.70e-07;5!UBERON:0001130;7.70e-07;5!UBERON:0001066;7.70e-07;5!UBERON:0001468;7.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,5.45e-11,5;UBERON:0003104,2.34e-10,160;UBERON:0009142,2.34e-10,160;UBERON:0005256,5.46e-09,122;UBERON:0004905,2.32e-08,8;UBERON:0000982,2.32e-08,8;UBERON:0004770,2.32e-08,8;UBERON:0006876,3.31e-08,11;UBERON:0001134,8.61e-08,62;UBERON:0002036,8.61e-08,62;UBERON:0003082,8.61e-08,62;UBERON:0001013,9.96e-08,14;UBERON:0002385,2.18e-07,64;UBERON:0001015,2.18e-07,64;UBERON:0000383,2.18e-07,64;UBERON:0003210,2.35e-07,3;UBERON:0007100,3.17e-07,27;UBERON:0000948,5.47e-07,24;UBERON:0005498,5.47e-07,24;UBERON:0004140,5.47e-07,24;UBERON:0009881,5.47e-07,24;UBERON:0004141,5.47e-07,24;UBERON:0003084,5.47e-07,24;UBERON:0007005,5.47e-07,24;UBERON:0004139,5.47e-07,24;UBERON:0004291,5.47e-07,24;UBERON:0002100,5.69e-07,199;UBERON:0002329,6.08e-07,71;UBERON:0003059,6.08e-07,71;UBERON:0007282,6.08e-07,71;UBERON:0004290,6.08e-07,71;UBERON:0009618,6.08e-07,71;UBERON:0011135,7.63e-07,5;UBERON:0002216,7.63e-07,5;UBERON:0011134,7.63e-07,5;UBERON:0002209,7.63e-07,5;UBERON:0002213,7.63e-07,5;UBERON:0005856,7.63e-07,5;UBERON:0005866,7.63e-07,5;UBERON:0005863,7.63e-07,5;UBERON:0007844,7.63e-07,5;UBERON:0011138,7.63e-07,5;UBERON:0001130,7.63e-07,5;UBERON:0001066,7.63e-07,5;UBERON:0001468,7.63e-07,5;UBERON:0003077,8.96e-07,72;UBERON:0007285,8.96e-07,72 | |||
|phase1_expression=5.26867299884614,2.5692062866918,3.52386010239928,2.00146596706261,0.893922188854576,0,0,0.631719873426831,1.56711376919903,0,0,0,0,1.36142988256051,3.31397375727916,0.672325146451775,0,0,0,0.492484232307152,0.612002073732759,0,0.286235987131057,0.410623275218653,0.87879847716362,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,0.895037932904712,1.0843174571537,2.50668955317945,1.73815822752988,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.132409180813219,1.43418310374407,0.709336764396714,0,0,0,3.11211035399766,1.21239604862719,1.30769522490767,12.4113090668844,16.70910180992,0,0.312160076830321,0,0.149448680551801,0.587172493218824,0.161872944368132,0.842704840213491,0.816616685019573,0.368502951935304,0.826606249406124,0,0.989067717114227,2.73048408581408,1.43723628363248,0,0,0.831192346452549,0.877955241761676,0.612975591598039,0.901428353439581,0.680593098960126,1.25572744982203,0,0.847727604638247,0.600182192168805,0.515262646192195,1.54584324027377,1.11670113798954,0.506328996723799,0.974370051611986,0.757301322732344,0.460249493211497,0.323292113637624,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,1.56449532329816,0,0,0.464367928031979,2.88751792667834,0.236613600079688,0.168584690078102,0.723033089650446,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,3.80265104465493,0,0.590789906681404,0,0.245976877086227,1.02940686179115,0.109750285408626,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0,4.26098120512371,2.61576041299968,6.7471222955274,0.775630294546667,0,0,0.531876233169741,3.12022310734098,0.514414748524284,1.41849132023278,2.39779961114489,5.43316375900961,1.62786481617433,0,1.95441710576241,4.6200953336531,0,0,0,0,0,0,0,1.19812427745791,0,0,1.30303176000821,3.28762116080613,1.61154866915906,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.57652132610194,4.50153468953709,0.542530047399471,0.207970861530807,0.356857977594324,0,0.234282829985426,0.902838299183157,0,1.03473071292505,0.664225598535437,0,0,1.56640925970192,3.77457766191941,0,0.215714200818617,0,0,0,0,2.97729369382532,0.306923946576125,0.841980283299221,2.05022638809122,2.04682899626681,0.482561763430822,1.48418066444991,1.23367755042124,0.710246901252508,0.821271560138091,0,0.929683027679674,0.362578348774867,0,0.184161977871793,0.918515585316854,1.63882051206045,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,1.66215201785745,0,0,0,0,0,0.650756789328606,0.412164046590889,0,0,0,0,3.21367859688319,0.386682873168488,2.00263202249038,2.45605879561807,0.551346289938122,3.97454906012612,2.90033387828457,1.36362603865761,1.06838442776085,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0.143124886741991,5.58237554039501,2.53103539774981,1.71567174531442,0,0.855877976067841,1.27281299170375,0,1.43897966066652,0.54907405947211,1.06031162111118,0,1.58510321173008,0.421258456238981,0,0.974853958525138,0,1.63799893689583,0.424216295861138,0,0,0,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0,0.430234056612155,0.491245205065606,0,0.354761064070598,1.26664581178598,1.64647446479951,0.379473173765715,1.74967360122491,0.0962221127255121,0.670302275535787,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,3.51619630252546,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0.828851746593443,0,0,0,0.622079175323615,0.359473404589307,0.179021174675609,0,1.38100767891707,0,1.11136990144637,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,1.92375646259493,0,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.707660516026713,0.611030144933625,0,0,0,0.202203398942031,1.60515529459758,0,0,0.19566461893209,0,0,1.20990716048664,0,1.95878396848313,0,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.873633341210151,0,0,0,0,0.775912131907355,0,0.451961481561065,0,0.19871461170299,0.253243183823515,0,0,1.28071796843612,0,0.288180834308212,0,0,0,0,0,0,0,0.101998217636322,0,0,0.1369053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| ||
|short_description=p8@EPS8 | |||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p8@EPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | -153bp_to_ENST00000281172, ENST00000543223, NM_004447, uc001rdb.2, uc009zig.2_5end |
EntrezGene: | EPS8 |
HGNC: | 3420 |
UniProt: | Q12929F5H819B4E3T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.10e-11 | 15 |
extracellular matrix secreting cell | 7.22e-09 | 15 |
leptomeningeal cell | 2.35e-07 | 3 |
cell of skeletal muscle | 3.03e-07 | 9 |
smooth muscle cell of the brain vasculature | 5.56e-07 | 3 |
muscle precursor cell | 7.51e-07 | 58 |
myoblast | 7.51e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.51e-07 | 58 |
skeletal muscle satellite cell | 9.60e-07 | 3 |