FFCP PHASE1:Hg19::chr17:74547203..74547217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_uc002jrv.1_5end | |||
|cluster_id=chr17:74547203..74547217,- | |||
|description=CAGE_peak_7_at_CYGB_5end | |||
|id=chr17:74547203..74547217,- | |||
|ontology_enrichment_celltype=CL:0002368!3.64e-11!13;CL:0002076!4.64e-10!43;CL:0000223!7.28e-09!59;CL:0002159!1.40e-08!13;CL:0002202!6.18e-07!9;CL:0002632!6.18e-07!9;CL:0000066!6.67e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.79e-22;13!CL:0000244;3.22e-16;4!CL:0000731;3.22e-16;4!CL:0002076;2.64e-15;42!CL:0002202;2.47e-14;9!CL:0002632;2.47e-14;9!CL:0002328;5.93e-12;3!CL:0000307;1.25e-11;3!CL:0002159;4.34e-09;14!CL:0000317;9.20e-09;2!CL:1000448;9.20e-09;2!CL:0002308;9.20e-09;2!CL:0002140;9.20e-09;2!CL:0000622;3.47e-07;5!CL:0000362;6.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.74e-22,13;CL:0000223,1.83e-20,58;CL:0002076,1.47e-18,42;CL:0000244,3.17e-16,4;CL:0000731,3.17e-16,4;CL:0002202,2.50e-14,9;CL:0002632,2.50e-14,9;CL:0002328,5.72e-12,3;CL:0000066,7.35e-12,253;CL:0000068,1.32e-11,3;CL:0000069,1.32e-11,3;CL:0000307,1.32e-11,3;CL:0000377,1.32e-11,3;CL:0002321,4.79e-10,250;CL:0002159,4.25e-09,14;CL:0000317,8.87e-09,2;CL:1000448,8.87e-09,2;CL:0002308,8.87e-09,2;CL:0002140,8.87e-09,2;CL:0000622,3.06e-07,5;CL:0000362,6.49e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.84e-12;58!CL:0000377;1.25e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.26e-13!169;UBERON:0000925!2.26e-13!169;UBERON:0006595!2.26e-13!169;UBERON:0001004!5.37e-10!72;UBERON:0000475!2.45e-09!365;UBERON:0000466!3.85e-09!126;UBERON:0001007!6.21e-09!155;UBERON:0001555!6.21e-09!155;UBERON:0007026!6.21e-09!155;UBERON:0009569!6.55e-09!113;UBERON:0005911!7.91e-09!82;UBERON:0000065!1.61e-08!53;UBERON:0005178!3.31e-08!34;UBERON:0002224!3.31e-08!34;UBERON:0004921!5.05e-08!129;UBERON:0004185!5.05e-08!129;UBERON:0000464!5.41e-08!104;UBERON:0007196!6.39e-08!14;UBERON:0001558!6.39e-08!14;UBERON:0005181!8.21e-08!35;UBERON:0005153!6.60e-07!37;UBERON:0005177!7.09e-07!107;UBERON:0002100!9.53e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.62e-13;5!UBERON:0004815;5.93e-12;3!UBERON:0002031;5.93e-12;3!UBERON:0007196;4.17e-11;15!UBERON:0001558;4.17e-11;15!UBERON:0000486;7.14e-11;12!UBERON:0005910;8.23e-11;6!UBERON:0005178;4.17e-10;34!UBERON:0002224;4.17e-10;34!UBERON:0000065;6.80e-09;44!UBERON:0002419;9.20e-09;2!UBERON:0007771;9.20e-09;2!UBERON:0003297;9.20e-09;2!UBERON:0001821;9.20e-09;2!UBERON:0003487;9.20e-09;2!UBERON:0001820;9.20e-09;2!UBERON:0005181;1.60e-08;35!UBERON:0003126;1.81e-08;7!UBERON:0001005;1.81e-08;7!UBERON:0002185;2.52e-07;5!UBERON:0005911;8.35e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.54e-13,5;UBERON:0004815,5.72e-12,3;UBERON:0002031,5.72e-12,3;UBERON:0004119,6.32e-12,160;UBERON:0000925,6.32e-12,160;UBERON:0006595,6.32e-12,160;UBERON:0007196,4.27e-11,15;UBERON:0001558,4.27e-11,15;UBERON:0005910,8.14e-11,6;UBERON:0005178,1.65e-10,34;UBERON:0002224,1.65e-10,34;UBERON:0005911,3.68e-10,82;UBERON:0005181,3.81e-10,35;UBERON:0002419,8.87e-09,2;UBERON:0007771,8.87e-09,2;UBERON:0003297,8.87e-09,2;UBERON:0001821,8.87e-09,2;UBERON:0003487,8.87e-09,2;UBERON:0001820,8.87e-09,2;UBERON:0005089,8.87e-09,2;UBERON:0005088,8.87e-09,2;UBERON:0001004,1.03e-08,74;UBERON:0000065,1.53e-08,54;UBERON:0003126,1.91e-08,7;UBERON:0001005,1.91e-08,7;UBERON:0008947,1.59e-07,38;UBERON:0003258,1.59e-07,38;UBERON:0002185,2.47e-07,5;UBERON:0001041,6.73e-07,87 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,1.0007329835313,0,0,0,1.26343974685366,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,7.35536979583142,3.614471025339,8.50434223383612,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,3.27865759463288,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0.966304265816484,1.09098448236334,4.87567812161307,0,0,0,0,0,0.36497735907583,0,0,2.76269842704961,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,4.49976170175365,6.74410519545717,0.703702806881416,14.5363858898891,0,0,0,0,0.234817388471643,0.433099343283221,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.335964256397719,5.67100388969546,0.179117045405697,0.871901815541886,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0.601892199455438,4.5481500811197,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.896974044789907,0,0,0,0,0,0,0,0.116210378459959,0,6.21570057940183,1.56537681191024,0,0.182091168006717,0.131124414959424,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,1.03041011647722,0,0,7.46545199395024,11.7010844286574,0,0,0,0.15350367472613,0,0,0.435050081742686,0,0.267096106940212,10.0823798370197,0.384380134730212,17.9933924617364,7.89030690673289,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0.767693373934002,0.42793898803392,0,0,0.899362287916574,0.54907405947211,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,2.31510213706675,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,4.42621718537356,3.35151137767894,4.3556393944529,0.282431402330337,20.2337525155478,10.1082885400575,12.4160442990269,14.7022976132454,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,1.95193241990045,0.0769502585037971,0,1.38338342632836,7.27036919719154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.876214728748802,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.261177619741208,0.34945333648406,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0.621262677827163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6599109814691,12.5272104739373,13.9525335778163,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,1.38823636338003,2.67247318669432,1.65695622138878,0,0,0,0,0,0,0.612691153526923,0.983617892129413,0,0,0,0,2.29363678276028,0.332787154610557,0.683060432355218,0,4.62427509459794,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,1.19428766609585,0,0,0,0,0,4.28883182749851,0,0,0,0,0,4.01441881309264,0,0,0.578742114812744,0,0,2.07258205038719,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,2.37795163123056,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.733714394086716,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0.535701835878287,0,0,0,1.06442844195167,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,1.53646629384555,0,0.430227358820278,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0.799529247399431,0.357107877211315,1.05868461514708,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0.26721740526556,0.18378979906969,0,0.151557396436479,0,0,0.20686599172379,0.426467963801962,0,0.193766729508018,0.248298857183432,0,0.0636471582781649,0,0,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p7@CYGB | |||
}} |
Latest revision as of 15:47, 17 September 2015
Short description: | p7@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_uc002jrv.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 5.74e-22 | 13 |
endodermal cell | 1.83e-20 | 58 |
endo-epithelial cell | 1.47e-18 | 42 |
transitional epithelial cell | 3.17e-16 | 4 |
urothelial cell | 3.17e-16 | 4 |
epithelial cell of tracheobronchial tree | 2.50e-14 | 9 |
epithelial cell of lower respiratory tract | 2.50e-14 | 9 |
bronchial epithelial cell | 5.72e-12 | 3 |
epithelial cell | 7.35e-12 | 253 |
duct epithelial cell | 1.32e-11 | 3 |
branched duct epithelial cell | 1.32e-11 | 3 |
tracheal epithelial cell | 1.32e-11 | 3 |
tracheoblast | 1.32e-11 | 3 |
embryonic cell | 4.79e-10 | 250 |
general ecto-epithelial cell | 4.25e-09 | 14 |
sebum secreting cell | 8.87e-09 | 2 |
epithelial cell of sweat gland | 8.87e-09 | 2 |
epithelial cell of skin gland | 8.87e-09 | 2 |
acinar cell of sebaceous gland | 8.87e-09 | 2 |
acinar cell | 3.06e-07 | 5 |
epidermal cell | 6.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.54e-13 | 5 |
lower respiratory tract epithelium | 5.72e-12 | 3 |
epithelium of bronchus | 5.72e-12 | 3 |
endoderm-derived structure | 6.32e-12 | 160 |
endoderm | 6.32e-12 | 160 |
presumptive endoderm | 6.32e-12 | 160 |
tracheobronchial tree | 4.27e-11 | 15 |
lower respiratory tract | 4.27e-11 | 15 |
transitional epithelium | 8.14e-11 | 6 |
thoracic cavity element | 1.65e-10 | 34 |
thoracic cavity | 1.65e-10 | 34 |
endo-epithelium | 3.68e-10 | 82 |
thoracic segment organ | 3.81e-10 | 35 |
skin gland | 8.87e-09 | 2 |
epidermis gland | 8.87e-09 | 2 |
gland of integumental system | 8.87e-09 | 2 |
sebaceous gland | 8.87e-09 | 2 |
skin sebaceous gland | 8.87e-09 | 2 |
sweat gland | 8.87e-09 | 2 |
sweat gland placode | 8.87e-09 | 2 |
sebaceous gland placode | 8.87e-09 | 2 |
respiratory system | 1.03e-08 | 74 |
respiratory tract | 1.53e-08 | 54 |
trachea | 1.91e-08 | 7 |
respiratory airway | 1.91e-08 | 7 |
respiratory primordium | 1.59e-07 | 38 |
endoderm of foregut | 1.59e-07 | 38 |
bronchus | 2.47e-07 | 5 |
foregut | 6.73e-07 | 87 |