FFCP PHASE1:Hg19::chr1:156470556..156470643,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:156470556..156470643,-
|short_description=p1@MEF2D
|description=CAGE_peak_1_at_MEF2D_5end
|association_with_transcript=0bp_to_ENST00000348159,ENST000004890...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4209 | |EntrezGene=4209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6997 | |HGNC=6997 | ||
|TSSclassifier=strong | |||
|UniProt=Q14814 | |UniProt=Q14814 | ||
|association_with_transcript=0bp_to_ENST00000348159,ENST00000489057_5end | |||
|cluster_id=chr1:156470556..156470643,- | |||
|description=CAGE_peak_1_at_MEF2D_5end | |||
|id=chr1:156470556..156470643,- | |||
|ontology_enrichment_celltype=CL:0000094!7.35e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;7.32e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.35e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-26!115;UBERON:0001049!2.16e-10!57;UBERON:0005068!2.16e-10!57;UBERON:0006241!2.16e-10!57;UBERON:0007135!2.16e-10!57;UBERON:0003080!2.41e-10!42;UBERON:0002780!4.11e-10!41;UBERON:0001890!4.11e-10!41;UBERON:0006240!4.11e-10!41;UBERON:0000955!6.94e-10!69;UBERON:0006238!6.94e-10!69;UBERON:0002619!2.82e-09!22;UBERON:0001950!8.77e-09!20;UBERON:0002616!1.29e-08!59;UBERON:0001893!2.97e-08!34;UBERON:0001869!3.72e-08!32;UBERON:0002791!8.82e-08!33;UBERON:0002020!3.25e-07!34;UBERON:0003528!3.25e-07!34;UBERON:0001017!3.68e-07!82;UBERON:0002346!3.97e-07!90;UBERON:0003075!4.58e-07!86;UBERON:0007284!4.58e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.70e-09;22!UBERON:0001950;8.40e-09;20!UBERON:0002780;1.48e-07;41!UBERON:0001890;1.48e-07;41!UBERON:0001893;2.03e-07;34!UBERON:0001869;2.31e-07;32!UBERON:0007023;3.14e-07;114!UBERON:0002791;6.66e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.96e-26,114;UBERON:0000073,1.34e-10,53;UBERON:0002616,1.34e-10,53;UBERON:0001049,3.65e-10,56;UBERON:0005068,3.65e-10,56;UBERON:0006241,3.65e-10,56;UBERON:0007135,3.65e-10,56;UBERON:0002780,4.11e-10,41;UBERON:0001890,4.11e-10,41;UBERON:0003080,4.11e-10,41;UBERON:0006240,4.11e-10,41;UBERON:0000955,1.15e-09,68;UBERON:0006238,1.15e-09,68;UBERON:0002619,2.82e-09,22;UBERON:0001950,8.77e-09,20;UBERON:0001893,2.97e-08,34;UBERON:0001869,3.72e-08,32;UBERON:0002791,1.54e-07,32;UBERON:0003528,3.25e-07,34;UBERON:0002020,3.25e-07,34;UBERON:0010371,4.58e-07,104;UBERON:0001017,5.69e-07,81;UBERON:0002346,6.34e-07,86;UBERON:0003075,7.27e-07,82;UBERON:0007284,7.27e-07,82 | |||
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| ||
|short_description=p1@MEF2D | |||
}} | }} |
Latest revision as of 16:11, 17 September 2015
Short description: | p1@MEF2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEF2D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000348159, ENST00000489057_5end |
EntrezGene: | MEF2D |
HGNC: | 6997 |
UniProt: | Q14814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.96e-26 | 114 |
regional part of nervous system | 1.34e-10 | 53 |
regional part of brain | 1.34e-10 | 53 |
neural tube | 3.65e-10 | 56 |
neural rod | 3.65e-10 | 56 |
future spinal cord | 3.65e-10 | 56 |
neural keel | 3.65e-10 | 56 |
regional part of forebrain | 4.11e-10 | 41 |
forebrain | 4.11e-10 | 41 |
anterior neural tube | 4.11e-10 | 41 |
future forebrain | 4.11e-10 | 41 |
brain | 1.15e-09 | 68 |
future brain | 1.15e-09 | 68 |
regional part of cerebral cortex | 2.82e-09 | 22 |
neocortex | 8.77e-09 | 20 |
telencephalon | 2.97e-08 | 34 |
cerebral hemisphere | 3.72e-08 | 32 |
regional part of telencephalon | 1.54e-07 | 32 |
brain grey matter | 3.25e-07 | 34 |
gray matter | 3.25e-07 | 34 |
ecto-epithelium | 4.58e-07 | 104 |
central nervous system | 5.69e-07 | 81 |
neurectoderm | 6.34e-07 | 86 |
neural plate | 7.27e-07 | 82 |
presumptive neural plate | 7.27e-07 | 82 |