FFCP PHASE1:Hg19::chr8:24809300..24809311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4747 | |EntrezGene=4747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7739 | |HGNC=7739 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=367bp_to_BC037803_5end | |association_with_transcript=367bp_to_BC037803_5end | ||
|cluster_id=chr8:24809300..24809311,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_4_at_NEFL_5end | |description=CAGE_peak_4_at_NEFL_5end | ||
|id=chr8:24809300..24809311,- | |id=chr8:24809300..24809311,- | ||
|ontology_enrichment_celltype=CL:0000242!9.96e-10!2 | |ontology_enrichment_celltype=CL:0000242!9.96e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.58e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.58e-34,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p4@NEFL | |short_description=p4@NEFL | ||
}} | }} |
Latest revision as of 16:11, 17 September 2015
Short description: | p4@NEFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEFL_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 367bp_to_BC037803_5end |
EntrezGene: | NEFL |
HGNC: | 7739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.58e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.27e-25 | 20 |
regional part of cerebral cortex | 1.84e-23 | 22 |
gyrus | 4.34e-23 | 6 |
cerebral cortex | 7.73e-21 | 25 |
pallium | 7.73e-21 | 25 |
middle temporal gyrus | 5.48e-18 | 2 |
middle frontal gyrus | 7.67e-18 | 2 |
regional part of telencephalon | 1.45e-16 | 32 |
cerebral hemisphere | 1.45e-16 | 32 |
brain grey matter | 1.18e-15 | 34 |
gray matter | 1.18e-15 | 34 |
telencephalon | 1.18e-15 | 34 |
regional part of forebrain | 3.76e-13 | 41 |
forebrain | 3.76e-13 | 41 |
anterior neural tube | 3.76e-13 | 41 |
future forebrain | 3.76e-13 | 41 |
frontal cortex | 2.31e-12 | 3 |
regional part of nervous system | 2.34e-10 | 53 |
regional part of brain | 2.34e-10 | 53 |
neural tube | 7.69e-10 | 56 |
neural rod | 7.69e-10 | 56 |
future spinal cord | 7.69e-10 | 56 |
neural keel | 7.69e-10 | 56 |
pre-chordal neural plate | 4.34e-09 | 61 |
brain | 4.15e-08 | 68 |
future brain | 4.15e-08 | 68 |
parietal lobe | 6.55e-08 | 5 |
occipital lobe | 7.49e-08 | 5 |
central nervous system | 6.53e-07 | 81 |
neural plate | 6.53e-07 | 82 |
presumptive neural plate | 6.53e-07 | 82 |