FFCP PHASE1:Hg19::chr2:54895826..54895840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6711 | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11275 | |HGNC=11275 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_BC009640_5end | |association_with_transcript=5bp_to_BC009640_5end | ||
|cluster_id=chr2:54895826..54895840,+ | |||
|description=CAGE_peak_13_at_SPTBN1_5end | |description=CAGE_peak_13_at_SPTBN1_5end | ||
|id=chr2:54895826..54895840,+ | |id=chr2:54895826..54895840,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.41e-17!241;UBERON:0000477!4.00e-16!286;UBERON:0000025!9.18e-15!194;UBERON:0007023!3.01e-13!115;UBERON:0001049!6.78e-11!57;UBERON:0005068!6.78e-11!57;UBERON:0006241!6.78e-11!57;UBERON:0007135!6.78e-11!57;UBERON:0002616!1.58e-10!59;UBERON:0000481!2.78e-10!347;UBERON:0000475!2.87e-10!365;UBERON:0002020!8.41e-10!34;UBERON:0003528!8.41e-10!34;UBERON:0003080!1.10e-09!42;UBERON:0002780!1.27e-09!41;UBERON:0001890!1.27e-09!41;UBERON:0006240!1.27e-09!41;UBERON:0000955!1.41e-09!69;UBERON:0006238!1.41e-09!69;UBERON:0001893!5.28e-09!34;UBERON:0002791!6.05e-09!33;UBERON:0001017!9.10e-09!82;UBERON:0001869!1.15e-08!32;UBERON:0000483!1.77e-08!309;UBERON:0005743!2.11e-08!86;UBERON:0000073!2.29e-08!94;UBERON:0001016!2.29e-08!94;UBERON:0000119!3.41e-08!312;UBERON:0002619!9.93e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.60e-08;34!UBERON:0002020;2.60e-08;34!UBERON:0002791;1.07e-07;32!UBERON:0001869;3.47e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.92e-12,240;UBERON:0000025,8.07e-11,192;UBERON:0003528,1.98e-10,34;UBERON:0002020,1.98e-10,34;UBERON:0007023,3.48e-09,114;UBERON:0002791,4.19e-09,32;UBERON:0001049,9.22e-09,56;UBERON:0005068,9.22e-09,56;UBERON:0006241,9.22e-09,56;UBERON:0007135,9.22e-09,56;UBERON:0002780,1.51e-08,41;UBERON:0001890,1.51e-08,41;UBERON:0003080,1.51e-08,41;UBERON:0006240,1.51e-08,41;UBERON:0001893,3.12e-08,34;UBERON:0000073,3.30e-08,53;UBERON:0002616,3.30e-08,53;UBERON:0001869,3.63e-08,32;UBERON:0002619,3.91e-07,22;UBERON:0000956,7.80e-07,25;UBERON:0000203,7.80e-07,25;UBERON:0000955,8.17e-07,68;UBERON:0006238,8.17e-07,68 | |||
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| ||
|short_description=p13@SPTBN1 | |short_description=p13@SPTBN1 | ||
}} | }} |
Latest revision as of 16:15, 17 September 2015
Short description: | p13@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_BC009640_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.92e-12 | 240 |
tube | 8.07e-11 | 192 |
brain grey matter | 1.98e-10 | 34 |
gray matter | 1.98e-10 | 34 |
adult organism | 3.48e-09 | 114 |
regional part of telencephalon | 4.19e-09 | 32 |
neural tube | 9.22e-09 | 56 |
neural rod | 9.22e-09 | 56 |
future spinal cord | 9.22e-09 | 56 |
neural keel | 9.22e-09 | 56 |
regional part of forebrain | 1.51e-08 | 41 |
forebrain | 1.51e-08 | 41 |
anterior neural tube | 1.51e-08 | 41 |
future forebrain | 1.51e-08 | 41 |
telencephalon | 3.12e-08 | 34 |
regional part of nervous system | 3.30e-08 | 53 |
regional part of brain | 3.30e-08 | 53 |
cerebral hemisphere | 3.63e-08 | 32 |
regional part of cerebral cortex | 3.91e-07 | 22 |
cerebral cortex | 7.80e-07 | 25 |
pallium | 7.80e-07 | 25 |
brain | 8.17e-07 | 68 |
future brain | 8.17e-07 | 68 |