FFCP PHASE1:Hg19::chr11:33061543..33061585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55346 | |EntrezGene=55346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25655 | |HGNC=25655 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NUJ3,E9PS88 | |UniProt=Q9NUJ3,E9PS88 | ||
|association_with_transcript=0bp_to_ENST00000432887,ENST00000528898,NM_001145541,uc001mue.2,uc010rei.1_5end | |association_with_transcript=0bp_to_ENST00000432887,ENST00000528898,NM_001145541,uc001mue.2,uc010rei.1_5end | ||
|cluster_id=chr11:33061543..33061585,+ | |||
|description=CAGE_peak_2_at_TCP11L1_5end | |description=CAGE_peak_2_at_TCP11L1_5end | ||
|id=chr11:33061543..33061585,+ | |id=chr11:33061543..33061585,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.41e-09!75;CL:0000055!5.75e-08!180 | |ontology_enrichment_celltype=CL:0000057!2.41e-09!75;CL:0000055!5.75e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.70e-07;19 | |ontology_enrichment_celltype_v019=CL:0000349;1.70e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.63e-10,76;CL:0000349,1.93e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.63e-15!659;UBERON:0000467!1.29e-14!625;UBERON:0000480!1.65e-14!626;UBERON:0000475!1.45e-10!365;UBERON:0000062!2.19e-10!511;UBERON:0002050!8.25e-10!605;UBERON:0005423!8.25e-10!605;UBERON:0003102!1.07e-09!95;UBERON:0000923!1.21e-09!604;UBERON:0005291!1.21e-09!604;UBERON:0006598!1.21e-09!604;UBERON:0002532!1.21e-09!604;UBERON:0000481!8.74e-09!347;UBERON:0000922!1.06e-08!612;UBERON:0005631!1.42e-08!14;UBERON:0000158!1.42e-08!14;UBERON:0004923!1.01e-07!57;UBERON:0004119!2.23e-07!169;UBERON:0000925!2.23e-07!169;UBERON:0006595!2.23e-07!169;UBERON:0000064!4.41e-07!219;UBERON:0000486!8.47e-07!82;UBERON:0000914!8.93e-07!83;UBERON:0002329!8.93e-07!83;UBERON:0003077!8.93e-07!83;UBERON:0003059!8.93e-07!83;UBERON:0007282!8.93e-07!83;UBERON:0009618!8.93e-07!83;UBERON:0007285!8.93e-07!83 | |ontology_enrichment_uberon=UBERON:0000468!3.63e-15!659;UBERON:0000467!1.29e-14!625;UBERON:0000480!1.65e-14!626;UBERON:0000475!1.45e-10!365;UBERON:0000062!2.19e-10!511;UBERON:0002050!8.25e-10!605;UBERON:0005423!8.25e-10!605;UBERON:0003102!1.07e-09!95;UBERON:0000923!1.21e-09!604;UBERON:0005291!1.21e-09!604;UBERON:0006598!1.21e-09!604;UBERON:0002532!1.21e-09!604;UBERON:0000481!8.74e-09!347;UBERON:0000922!1.06e-08!612;UBERON:0005631!1.42e-08!14;UBERON:0000158!1.42e-08!14;UBERON:0004923!1.01e-07!57;UBERON:0004119!2.23e-07!169;UBERON:0000925!2.23e-07!169;UBERON:0006595!2.23e-07!169;UBERON:0000064!4.41e-07!219;UBERON:0000486!8.47e-07!82;UBERON:0000914!8.93e-07!83;UBERON:0002329!8.93e-07!83;UBERON:0003077!8.93e-07!83;UBERON:0003059!8.93e-07!83;UBERON:0007282!8.93e-07!83;UBERON:0009618!8.93e-07!83;UBERON:0007285!8.93e-07!83 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.30e-11,99;UBERON:0004923,1.99e-09,66;UBERON:0002050,2.66e-09,564;UBERON:0005631,7.30e-09,14;UBERON:0000158,7.30e-09,14;UBERON:0000923,1.75e-08,560;UBERON:0010316,1.75e-08,560;UBERON:0005291,1.75e-08,560;UBERON:0006598,1.75e-08,560;UBERON:0010317,1.75e-08,560;UBERON:0002532,1.75e-08,560;UBERON:0005423,2.37e-08,581;UBERON:0004119,7.40e-08,160;UBERON:0000925,7.40e-08,160;UBERON:0006595,7.40e-08,160;UBERON:0000922,3.81e-07,592 | |||
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| ||
|short_description=p2@TCP11L1 | |short_description=p2@TCP11L1 | ||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p2@TCP11L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCP11L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432887, ENST00000528898, NM_001145541, uc001mue.2, uc010rei.1_5end |
EntrezGene: | TCP11L1 |
HGNC: | 25655 |
UniProt: | Q9NUJ3E9PS88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.63e-10 | 76 |
extraembryonic cell | 1.93e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.30e-11 | 99 |
organ component layer | 1.99e-09 | 66 |
embryonic structure | 2.66e-09 | 564 |
extraembryonic membrane | 7.30e-09 | 14 |
membranous layer | 7.30e-09 | 14 |
germ layer | 1.75e-08 | 560 |
germ layer / neural crest | 1.75e-08 | 560 |
embryonic tissue | 1.75e-08 | 560 |
presumptive structure | 1.75e-08 | 560 |
germ layer / neural crest derived structure | 1.75e-08 | 560 |
epiblast (generic) | 1.75e-08 | 560 |
developing anatomical structure | 2.37e-08 | 581 |
endoderm-derived structure | 7.40e-08 | 160 |
endoderm | 7.40e-08 | 160 |
presumptive endoderm | 7.40e-08 | 160 |
embryo | 3.81e-07 | 592 |