FFCP PHASE1:Hg19::chr17:75084891..75084905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33099 | |HGNC=33099 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000366365_5end | |association_with_transcript=-44bp_to_ENST00000366365_5end | ||
|cluster_id=chr17:75084891..75084905,+ | |||
|description=CAGE_peak_2_at_LINC00338_5end | |description=CAGE_peak_2_at_LINC00338_5end | ||
|id=chr17:75084891..75084905,+ | |id=chr17:75084891..75084905,+ | ||
|ontology_enrichment_celltype=CL:0002139!9.28e-15!24;CL:0000115!1.81e-12!35;CL:0000071!6.47e-12!18;CL:0002546!6.47e-12!18;CL:0000213!9.37e-11!57;CL:0000215!9.37e-11!57;CL:0000763!3.88e-10!112;CL:0000049!3.88e-10!112;CL:0002078!6.04e-10!44;CL:0002057!6.54e-09!42;CL:0000860!8.49e-09!45;CL:0000766!8.26e-08!76;CL:0000988!2.89e-07!182;CL:1000413!4.44e-07!9;CL:0000222!7.02e-07!119 | |ontology_enrichment_celltype=CL:0002139!9.28e-15!24;CL:0000115!1.81e-12!35;CL:0000071!6.47e-12!18;CL:0002546!6.47e-12!18;CL:0000213!9.37e-11!57;CL:0000215!9.37e-11!57;CL:0000763!3.88e-10!112;CL:0000049!3.88e-10!112;CL:0002078!6.04e-10!44;CL:0002057!6.54e-09!42;CL:0000860!8.49e-09!45;CL:0000766!8.26e-08!76;CL:0000988!2.89e-07!182;CL:1000413!4.44e-07!9;CL:0000222!7.02e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.17e-30;24!CL:0000071;9.24e-26;18!CL:0000115;7.74e-25;36!CL:1000413;1.79e-15;9!CL:0002078;3.01e-15;45!CL:0000213;1.57e-12;58!CL:0000215;1.57e-12;58!CL:0000860;1.80e-11;33!CL:0002057;1.80e-11;33!CL:0002544;4.95e-11;6!CL:0002543;1.59e-10;6!CL:0000081;1.32e-09;11!CL:0002188;1.44e-09;5!CL:0000094;1.80e-08;8!CL:0000473;8.01e-08;39!CL:0000234;8.01e-08;39!CL:0000775;4.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.01e-31,24;CL:0000115,1.73e-29,36;CL:0000071,4.19e-26,18;CL:0002546,4.19e-26,18;CL:0002078,1.31e-23,45;CL:0000213,2.04e-20,58;CL:0000215,2.04e-20,58;CL:1000413,1.68e-15,9;CL:0002544,4.87e-11,6;CL:0000763,4.89e-11,108;CL:0000049,4.89e-11,108;CL:0002543,8.01e-11,6;CL:0000766,9.21e-11,72;CL:0000860,9.67e-11,42;CL:0002057,9.67e-11,42;CL:0000081,1.58e-09,11;CL:0000222,1.59e-09,121;CL:0002188,2.89e-09,5;CL:0000473,9.94e-09,48;CL:0000234,9.94e-09,48;CL:0000557,1.06e-08,67;CL:0000094,1.49e-08,8;CL:0000076,1.75e-07,63;CL:0002009,2.60e-07,61;CL:0000775,4.77e-07,3;CL:0005020,8.74e-07,6;CL:0002138,8.74e-07,6;CL:0005022,8.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.24e-26;18!CL:0002057;5.34e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.18e-12!216;UBERON:0001986!6.47e-12!18;UBERON:0004638!6.47e-12!18;UBERON:0004852!6.47e-12!18;UBERON:0000487!1.77e-11!22;UBERON:0006914!2.61e-10!25;UBERON:0001009!3.30e-10!113;UBERON:0004535!5.08e-10!110;UBERON:0002193!3.15e-09!112;UBERON:0002049!1.28e-08!79;UBERON:0007798!1.28e-08!79;UBERON:0000055!6.94e-08!69;UBERON:0002390!1.40e-07!102;UBERON:0003061!1.40e-07!102;UBERON:0003915!4.44e-07!9;UBERON:0004700!4.44e-07!9;UBERON:0001917!4.44e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.24e-26;18!UBERON:0001986;9.24e-26;18!UBERON:0004852;9.24e-26;18!UBERON:0000487;9.36e-23;22!UBERON:0006914;2.50e-19;25!UBERON:0003915;1.79e-15;9!UBERON:0004700;1.79e-15;9!UBERON:0001917;1.79e-15;9!UBERON:0000490;2.27e-15;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.19e-26,18;UBERON:0001986,4.19e-26,18;UBERON:0004852,4.19e-26,18;UBERON:0000487,4.33e-23,22;UBERON:0006914,1.29e-19,25;UBERON:0003081,4.78e-17,203;UBERON:0003915,1.68e-15,9;UBERON:0004700,1.68e-15,9;UBERON:0001917,1.68e-15,9;UBERON:0004535,4.98e-13,109;UBERON:0001009,2.19e-12,112;UBERON:0000055,4.43e-12,68;UBERON:0002049,3.42e-11,78;UBERON:0007798,3.42e-11,78;UBERON:0002193,1.99e-10,108;UBERON:0007500,2.07e-09,59;UBERON:0001981,2.07e-09,59;UBERON:0004537,2.07e-09,59;UBERON:0006965,2.07e-09,59;UBERON:0003914,8.13e-09,117;UBERON:0002405,1.75e-08,93;UBERON:0002390,2.50e-08,98;UBERON:0003061,2.50e-08,98;UBERON:0002371,1.16e-07,76;UBERON:0004872,1.49e-07,83;UBERON:0000926,2.49e-07,315;UBERON:0004120,2.49e-07,315;UBERON:0006603,2.49e-07,315;UBERON:0001474,2.64e-07,82;UBERON:0001638,7.17e-07,9;UBERON:0003920,7.17e-07,9;UBERON:0004582,7.17e-07,9 | |||
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|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,2.09340350391728,0.436882744260345,0,0.123766352960047,0,0,1.20538905604795,1.46062018077475,0.487932798790507,0.492484232307152,1.02000345622126,0.940364164434263,0,0.821246550437305,0.502170558379211,0.61130724598361,0.738905305049512,0.472264687882075,0.393364276848904,1.53531759238885,0.77408061658038,0,0,0,0.309868802321207,0.284338464974843,0.880801318004542,2.21598163412751,1.80490002723128,0.217010870715852,0,0,0.257575567634187,1.01778767145695,1.13362783106643,1.21292030593908,0.464858073811369,2.05583944010913,1.85823822537062,1.7261543539329,2.81776777182011,1.89185783910868,2.41321976515633,3.22742341791913,1.35426486594342,0.376484679085209,0.545812300115692,1.57306439111559,0.612167784741805,0.962787081228281,0,0.659702600373432,0.997318288108159,2.55734850319616,0.870627715885752,2.8369261234557,0,4.01997864410789,3.65038042894141,1.95469960234605,1.21079900526674,0.736555271975129,0.632924774881769,0.211255286311942,0.212604299965044,0,0.786300418025466,0.150176892841506,0.48217676009124,0,0.39783335439818,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,3.96513985737078,1.68152568894461,0.790152254325231,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0,0,0,1.24930726552346,0,0,0.403213486449465,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0.886917589850256,1.05401742831751,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0.371457501329565,3.9752481473341,2.58070378531837,2.08284300964557,3.95715559346807,3.35599548967925,1.37559020970034,3.76190939766259,1.29208379584664,0.71153252537342,2.34304428935269,2.41697590265488,4.56163263431108,0.488124115096339,2.20597848207521,2.43042584364528,2.23249320710199,1.57170560838319,4.50445921933289,3.06633274931766,1.89853131913626,4.39684185432977,9.22462922052443,7.75560528296651,0,0,0.12663051166458,0.794455084879313,1.14734648299525,0,1.12135520028461,0,0.98667019366864,0.311211035399766,1.48181739276657,1.9615428373615,0.302714855289863,1.15235184896,0.234321431833797,0,0.570471821544449,0,0.822041490506354,1.45685649931318,0.702254033511242,0,0.491337269247072,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0.277064115484183,0.438977620880838,1.22595118319608,0.300476117813194,0.340296549480063,0.89694817844431,0,0.211931901159562,1.50045548042201,0.412210116953756,0.515281080091258,0.18611685633159,0.675105328965065,0.389748020644795,1.00973509697646,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0,0.545492241181669,0.286804595389004,0.243947412259191,0.397589304964456,0.464775771478074,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0.171567810298526,0,1.1240175325762,0,0,0,0,2.88662684050547,0.34779121492523,0.469634776943287,1.29929802984966,1.85194205030644,2.28304982681518,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0.985326475791887,0.616339038092582,2.28060927094849,1.44119953416961,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0.771622122786426,0,1.3321108950805,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.410952645100767,0.179060963239896,0.896681151948218,0.394061520403854,0.431255149719035,0.513372145118994,0,0,0.773288812777695,0,1.27587750330633,10.4860983352606,14.9580729602012,10.7748033493369,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0.620304078368662,0.647142602455851,0.533637789017222,0.303127571446259,0,0.604780586659361,0,0.153461973288062,0,0.128139149255701,0,0,0,0.616838775210622,0,0.657017248110473,1.55776328755086,0.232420756919918,0.241718899183244,0.40101294060657,0,0.229628896329213,0.546273504020151,0.262248829918848,0.451199612907412,0.15403067420883,1.56869953835371,1.46139224653261,0.211103257785751,10.2360045663807,6.29346709523108,1.0795795805107,7.71136263451447,0.541892875087706,0.501689773854853,0.254876273045038,0,1.56712328305525,0.438519753291869,0,0.512900250232778,0,0,0.206082023295445,1.19040304263846,0.907604499126468,0,0,0,0.193341436584244,0.462145851343933,0.15350367472613,1.10269257987624,0.322260734604821,0,0.255679882248303,0.356128142586949,0,0,0.765676274967505,0,0,0.62962469366128,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,0.572499546967965,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,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| ||
|short_description=p2@LINC00338 | |short_description=p2@LINC00338 | ||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p2@LINC00338 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00338_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000366365_5end |
EntrezGene: | NA |
HGNC: | 33099 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.01e-31 | 24 |
endothelial cell | 1.73e-29 | 36 |
blood vessel endothelial cell | 4.19e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.19e-26 | 18 |
meso-epithelial cell | 1.31e-23 | 45 |
lining cell | 2.04e-20 | 58 |
barrier cell | 2.04e-20 | 58 |
endothelial cell of artery | 1.68e-15 | 9 |
aortic endothelial cell | 4.87e-11 | 6 |
myeloid cell | 4.89e-11 | 108 |
common myeloid progenitor | 4.89e-11 | 108 |
vein endothelial cell | 8.01e-11 | 6 |
myeloid leukocyte | 9.21e-11 | 72 |
classical monocyte | 9.67e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.67e-11 | 42 |
blood cell | 1.58e-09 | 11 |
mesodermal cell | 1.59e-09 | 121 |
glomerular endothelial cell | 2.89e-09 | 5 |
defensive cell | 9.94e-09 | 48 |
phagocyte | 9.94e-09 | 48 |
granulocyte monocyte progenitor cell | 1.06e-08 | 67 |
granulocyte | 1.49e-08 | 8 |
squamous epithelial cell | 1.75e-07 | 63 |
macrophage dendritic cell progenitor | 2.60e-07 | 61 |
neutrophil | 4.77e-07 | 3 |
lymphangioblast | 8.74e-07 | 6 |
endothelial cell of lymphatic vessel | 8.74e-07 | 6 |
vascular lymphangioblast | 8.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.19e-26 | 18 |
endothelium | 4.19e-26 | 18 |
cardiovascular system endothelium | 4.19e-26 | 18 |
simple squamous epithelium | 4.33e-23 | 22 |
squamous epithelium | 1.29e-19 | 25 |
lateral plate mesoderm | 4.78e-17 | 203 |
endothelial tube | 1.68e-15 | 9 |
arterial system endothelium | 1.68e-15 | 9 |
endothelium of artery | 1.68e-15 | 9 |
cardiovascular system | 4.98e-13 | 109 |
circulatory system | 2.19e-12 | 112 |
vessel | 4.43e-12 | 68 |
vasculature | 3.42e-11 | 78 |
vascular system | 3.42e-11 | 78 |
hemolymphoid system | 1.99e-10 | 108 |
epithelial tube open at both ends | 2.07e-09 | 59 |
blood vessel | 2.07e-09 | 59 |
blood vasculature | 2.07e-09 | 59 |
vascular cord | 2.07e-09 | 59 |
epithelial tube | 8.13e-09 | 117 |
immune system | 1.75e-08 | 93 |
hematopoietic system | 2.50e-08 | 98 |
blood island | 2.50e-08 | 98 |
bone marrow | 1.16e-07 | 76 |
splanchnic layer of lateral plate mesoderm | 1.49e-07 | 83 |
mesoderm | 2.49e-07 | 315 |
mesoderm-derived structure | 2.49e-07 | 315 |
presumptive mesoderm | 2.49e-07 | 315 |
bone element | 2.64e-07 | 82 |
vein | 7.17e-07 | 9 |
venous blood vessel | 7.17e-07 | 9 |
venous system | 7.17e-07 | 9 |