FFCP PHASE1:Hg19::chr4:40058834..40058863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344967 | |EntrezGene=344967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000381811,NR_027277,uc011byr.1_5end | |association_with_transcript=-15bp_to_ENST00000381811,NR_027277,uc011byr.1_5end | ||
|cluster_id=chr4:40058834..40058863,- | |||
|description=CAGE_peak_1_at_LOC344967_5end | |description=CAGE_peak_1_at_LOC344967_5end | ||
|id=chr4:40058834..40058863,- | |id=chr4:40058834..40058863,- | ||
|ontology_enrichment_celltype=CL:0000557!1.12e-21!71;CL:0000839!7.71e-20!70;CL:0002009!5.93e-19!65;CL:0000860!6.48e-19!45;CL:0002057!8.85e-19!42;CL:0000766!1.98e-18!76;CL:0002194!2.50e-18!63;CL:0000576!2.50e-18!63;CL:0000040!2.50e-18!63;CL:0000559!2.50e-18!63;CL:0000763!1.64e-14!112;CL:0000049!1.64e-14!112;CL:0002371!3.90e-09!591;CL:0000048!8.42e-09!430;CL:0000738!8.54e-09!140;CL:0000988!8.79e-09!182;CL:0000723!1.69e-08!436;CL:0000034!2.21e-08!444;CL:0002031!3.79e-08!124;CL:0000037!5.50e-08!172;CL:0000566!5.50e-08!172;CL:0002320!6.72e-08!365;CL:0000144!1.77e-07!625;CL:0002393!2.70e-07!9;CL:0002397!2.70e-07!9;CL:0002087!3.36e-07!119;CL:0000134!4.74e-07!358;CL:0002032!8.17e-07!165;CL:0000837!8.17e-07!165 | |ontology_enrichment_celltype=CL:0000557!1.12e-21!71;CL:0000839!7.71e-20!70;CL:0002009!5.93e-19!65;CL:0000860!6.48e-19!45;CL:0002057!8.85e-19!42;CL:0000766!1.98e-18!76;CL:0002194!2.50e-18!63;CL:0000576!2.50e-18!63;CL:0000040!2.50e-18!63;CL:0000559!2.50e-18!63;CL:0000763!1.64e-14!112;CL:0000049!1.64e-14!112;CL:0002371!3.90e-09!591;CL:0000048!8.42e-09!430;CL:0000738!8.54e-09!140;CL:0000988!8.79e-09!182;CL:0000723!1.69e-08!436;CL:0000034!2.21e-08!444;CL:0002031!3.79e-08!124;CL:0000037!5.50e-08!172;CL:0000566!5.50e-08!172;CL:0002320!6.72e-08!365;CL:0000144!1.77e-07!625;CL:0002393!2.70e-07!9;CL:0002397!2.70e-07!9;CL:0002087!3.36e-07!119;CL:0000134!4.74e-07!358;CL:0002032!8.17e-07!165;CL:0000837!8.17e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000576;4.37e-18;48!CL:0000860;2.63e-16;33!CL:0002057;2.63e-16;33!CL:0000473;1.33e-13;39!CL:0000234;1.33e-13;39!CL:0000766;1.42e-12;69!CL:0002393;1.87e-08;6!CL:0002397;1.87e-08;6!CL:0000763;5.16e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.16e-30,67;CL:0000860,4.55e-29,42;CL:0002057,4.55e-29,42;CL:0000839,2.15e-28,66;CL:0000766,4.96e-28,72;CL:0000473,2.57e-27,48;CL:0000234,2.57e-27,48;CL:0002009,1.27e-25,61;CL:0002194,2.67e-25,59;CL:0000576,2.67e-25,59;CL:0000040,2.67e-25,59;CL:0000559,2.67e-25,59;CL:0000763,1.72e-21,108;CL:0000049,1.72e-21,108;CL:0000738,1.18e-12,136;CL:0002393,2.10e-12,9;CL:0002397,2.10e-12,9;CL:0000988,4.43e-12,177;CL:0000037,9.01e-12,168;CL:0002031,5.78e-11,120;CL:0002032,7.54e-10,161;CL:0000837,7.54e-10,161;CL:0002087,5.09e-09,115;CL:0000034,1.90e-07,441;CL:0000048,2.19e-07,427;CL:0000723,2.94e-07,433;CL:0002320,3.46e-07,361;CL:0000219,8.67e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.67e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.98e-24!86;UBERON:0002371!1.56e-23!80;UBERON:0002390!1.31e-20!102;UBERON:0003061!1.31e-20!102;UBERON:0004765!5.02e-20!101;UBERON:0001434!5.02e-20!101;UBERON:0003081!5.81e-20!216;UBERON:0002193!7.19e-19!112;UBERON:0002204!7.15e-16!167;UBERON:0002405!6.11e-13!115;UBERON:0000926!2.03e-09!448;UBERON:0004120!2.03e-09!448;UBERON:0006603!2.03e-09!448;UBERON:0002384!5.11e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.21e-31,76;UBERON:0001474,4.67e-30,82;UBERON:0004765,6.41e-27,90;UBERON:0002390,1.46e-25,98;UBERON:0003061,1.46e-25,98;UBERON:0002405,5.33e-23,93;UBERON:0001434,2.35e-22,100;UBERON:0002193,3.06e-22,108;UBERON:0003081,1.28e-21,203;UBERON:0002204,6.00e-17,167;UBERON:0000926,1.29e-14,315;UBERON:0004120,1.29e-14,315;UBERON:0006603,1.29e-14,315;UBERON:0002384,5.00e-07,371 | |||
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| ||
|short_description=p1@LOC344967 | |short_description=p1@LOC344967 | ||
}} | }} |
Latest revision as of 17:52, 17 September 2015
Short description: | p1@LOC344967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC344967_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000381811, NR_027277, uc011byr.1_5end |
EntrezGene: | LOC344967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.16e-30 | 67 |
classical monocyte | 4.55e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.55e-29 | 42 |
myeloid lineage restricted progenitor cell | 2.15e-28 | 66 |
myeloid leukocyte | 4.96e-28 | 72 |
defensive cell | 2.57e-27 | 48 |
phagocyte | 2.57e-27 | 48 |
macrophage dendritic cell progenitor | 1.27e-25 | 61 |
monopoietic cell | 2.67e-25 | 59 |
monocyte | 2.67e-25 | 59 |
monoblast | 2.67e-25 | 59 |
promonocyte | 2.67e-25 | 59 |
myeloid cell | 1.72e-21 | 108 |
common myeloid progenitor | 1.72e-21 | 108 |
leukocyte | 1.18e-12 | 136 |
intermediate monocyte | 2.10e-12 | 9 |
CD14-positive, CD16-positive monocyte | 2.10e-12 | 9 |
hematopoietic cell | 4.43e-12 | 177 |
hematopoietic stem cell | 9.01e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 5.78e-11 | 120 |
hematopoietic oligopotent progenitor cell | 7.54e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.54e-10 | 161 |
nongranular leukocyte | 5.09e-09 | 115 |
stem cell | 1.90e-07 | 441 |
multi fate stem cell | 2.19e-07 | 427 |
somatic stem cell | 2.94e-07 | 433 |
connective tissue cell | 3.46e-07 | 361 |
motile cell | 8.67e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.21e-31 | 76 |
bone element | 4.67e-30 | 82 |
skeletal element | 6.41e-27 | 90 |
hematopoietic system | 1.46e-25 | 98 |
blood island | 1.46e-25 | 98 |
immune system | 5.33e-23 | 93 |
skeletal system | 2.35e-22 | 100 |
hemolymphoid system | 3.06e-22 | 108 |
lateral plate mesoderm | 1.28e-21 | 203 |
musculoskeletal system | 6.00e-17 | 167 |
mesoderm | 1.29e-14 | 315 |
mesoderm-derived structure | 1.29e-14 | 315 |
presumptive mesoderm | 1.29e-14 | 315 |
connective tissue | 5.00e-07 | 371 |