FFCP PHASE1:Hg19::chr19:37837218..37837237,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284459 | |EntrezGene=284459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4928 | |HGNC=4928 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z6E1 | |UniProt=Q7Z6E1 | ||
|association_with_transcript=19bp_to_ENST00000541583,uc002ogd.2_5end | |association_with_transcript=19bp_to_ENST00000541583,uc002ogd.2_5end | ||
|cluster_id=chr19:37837218..37837237,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_5_at_HKR1_5end | |description=CAGE_peak_5_at_HKR1_5end | ||
|id=chr19:37837218..37837237,+ | |id=chr19:37837218..37837237,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.75e-53;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;5.22e-79;2!UBERON:0002757;5.22e-79;2!UBERON:0010134;5.22e-79;2!UBERON:0005408;5.22e-79;2!UBERON:0001899;5.22e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0002784;3.31e-40;4!UBERON:0000966;1.99e-32;5!UBERON:0005388;1.99e-32;5!UBERON:0001802;1.99e-32;5!UBERON:0001894;1.61e-23;7!UBERON:0000970;1.26e-18;20!UBERON:0002104;8.78e-18;21!UBERON:0000020;2.57e-16;23!UBERON:0001032;1.13e-15;24!UBERON:0004456;1.13e-15;24!UBERON:0000019;2.36e-09;19!UBERON:0000047;2.36e-09;19!UBERON:0004088;2.36e-09;19!UBERON:0010230;2.36e-09;19!UBERON:0001456;1.48e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.22e-79,2;UBERON:0002757,5.22e-79,2;UBERON:0010134,5.22e-79,2;UBERON:0005408,5.22e-79,2;UBERON:0001899,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0002784,3.31e-40,4;UBERON:0000966,3.11e-27,6;UBERON:0005388,3.11e-27,6;UBERON:0001802,3.11e-27,6;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0000970,8.78e-18,21;UBERON:0002104,8.78e-18,21;UBERON:0000020,1.13e-15,24;UBERON:0001032,1.13e-15,24;UBERON:0004456,1.13e-15,24;UBERON:0003056,7.02e-11,61;UBERON:0000019,6.17e-09,20;UBERON:0000047,6.17e-09,20;UBERON:0010312,6.17e-09,20;UBERON:0004088,6.17e-09,20;UBERON:0010230,6.17e-09,20;UBERON:0003072,6.17e-09,20;UBERON:0004128,6.17e-09,20;UBERON:0003071,6.17e-09,20;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0001456,3.27e-08,22;UBERON:0002346,6.20e-08,86 | |||
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|short_description=p5@HKR1 | |short_description=p5@HKR1 | ||
}} | }} |
Latest revision as of 17:56, 17 September 2015
Short description: | p5@HKR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HKR1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 19bp_to_ENST00000541583, uc002ogd.2_5end |
EntrezGene: | HKR1 |
HGNC: | 4928 |
UniProt: | Q7Z6E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.22e-79 | 2 |
regional part of epithalamus | 5.22e-79 | 2 |
secretory circumventricular organ | 5.22e-79 | 2 |
circumventricular organ | 5.22e-79 | 2 |
epithalamus | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
regional part of diencephalon | 3.31e-40 | 4 |
retina | 3.11e-27 | 6 |
photoreceptor array | 3.11e-27 | 6 |
posterior segment of eyeball | 3.11e-27 | 6 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
eye | 8.78e-18 | 21 |
visual system | 8.78e-18 | 21 |
sense organ | 1.13e-15 | 24 |
sensory system | 1.13e-15 | 24 |
entire sense organ system | 1.13e-15 | 24 |
pre-chordal neural plate | 7.02e-11 | 61 |
camera-type eye | 6.17e-09 | 20 |
simple eye | 6.17e-09 | 20 |
immature eye | 6.17e-09 | 20 |
ocular region | 6.17e-09 | 20 |
eyeball of camera-type eye | 6.17e-09 | 20 |
optic cup | 6.17e-09 | 20 |
optic vesicle | 6.17e-09 | 20 |
eye primordium | 6.17e-09 | 20 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
face | 3.27e-08 | 22 |
neurectoderm | 6.20e-08 | 86 |