FFCP PHASE1:Hg19::chr3:2140332..2140342,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152330 | |EntrezGene=152330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |HGNC=2174 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMQ2 | |UniProt=C9JMQ2 | ||
|association_with_transcript=-154bp_to_ENST00000422330_5end | |||
|cluster_id=chr3:2140332..2140342,+ | |||
|description=CAGE_peak_10_at_CNTN4_5end | |||
|id=chr3:2140332..2140342,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;4.22e-21;1!CL:0000557;4.22e-21;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1!DOID:3347;4.22e-21;1!DOID:201;2.49e-14;6!DOID:0060100;2.49e-14;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.53e-21,1;DOID:4549,1.53e-21,1;DOID:5861,1.53e-21,1;DOID:6496,1.53e-21,1;DOID:3347,2.82e-21,1;DOID:201,2.18e-14,6;DOID:0060100,2.18e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-38!115;UBERON:0001049!8.18e-25!57;UBERON:0005068!8.18e-25!57;UBERON:0006241!8.18e-25!57;UBERON:0007135!8.18e-25!57;UBERON:0002346!1.01e-21!90;UBERON:0003075!1.50e-20!86;UBERON:0007284!1.50e-20!86;UBERON:0002616!2.10e-20!59;UBERON:0001017!4.62e-19!82;UBERON:0005743!5.36e-19!86;UBERON:0000955!1.09e-18!69;UBERON:0006238!1.09e-18!69;UBERON:0000073!3.19e-16!94;UBERON:0001016!3.19e-16!94;UBERON:0003080!7.17e-16!42;UBERON:0001950!3.47e-15!20;UBERON:0002780!1.20e-14!41;UBERON:0001890!1.20e-14!41;UBERON:0006240!1.20e-14!41;UBERON:0002619!1.61e-13!22;UBERON:0002020!5.79e-13!34;UBERON:0003528!5.79e-13!34;UBERON:0001893!7.18e-13!34;UBERON:0000033!7.63e-13!123;UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0003056!1.86e-12!61;UBERON:0001869!1.93e-12!32;UBERON:0002791!7.50e-12!33;UBERON:0000956!1.64e-11!25;UBERON:0000203!1.64e-11!25;UBERON:0003076!1.53e-10!15;UBERON:0003057!1.53e-10!15;UBERON:0000924!2.29e-10!173;UBERON:0006601!2.29e-10!173;UBERON:0004121!1.52e-09!169;UBERON:0004733!6.64e-09!12;UBERON:0002028!6.64e-09!12;UBERON:0007277!6.64e-09!12;UBERON:0000062!9.46e-09!511;UBERON:0004732!4.28e-08!13;UBERON:0002298!6.13e-08!8;UBERON:0001871!1.55e-07!7;UBERON:0000200!2.63e-07!6;UBERON:0002680!3.47e-07!9;UBERON:0001895!3.47e-07!9;UBERON:0010092!3.47e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.56e-45;4!UBERON:0010133;6.56e-45;4!UBERON:0000007;2.45e-40;2!UBERON:0001894;4.86e-26;7!UBERON:0001905;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0001899;3.02e-11;2!UBERON:0001474;1.24e-10;18!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0004765;1.53e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.20e-44,4;UBERON:0010133,1.20e-44,4;UBERON:0000007,2.46e-40,2;UBERON:0001894,6.85e-26,7;UBERON:0006222,6.85e-26,7;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2;UBERON:0002418,4.52e-08,3;UBERON:0004755,4.52e-08,3 | |||
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| ||
|short_description=p10@CNTN4 | |||
}} | }} |
Latest revision as of 18:33, 17 September 2015
Short description: | p10@CNTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CNTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000422330_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | C9JMQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.20e-44 | 4 |
neuroendocrine gland | 1.20e-44 | 4 |
pituitary gland | 2.46e-40 | 2 |
diencephalon | 6.85e-26 | 7 |
future diencephalon | 6.85e-26 | 7 |
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |
cartilage tissue | 4.52e-08 | 3 |
skeletal tissue | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.53e-21 | 1 |
extraosseous chondrosarcoma | 1.53e-21 | 1 |
myxoid chondrosarcoma | 1.53e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 1.53e-21 | 1 |
osteosarcoma | 2.82e-21 | 1 |
connective tissue cancer | 2.18e-14 | 6 |
musculoskeletal system cancer | 2.18e-14 | 6 |