FFCP PHASE1:Hg19::chr1:157670670..157670684,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115352 | |EntrezGene=115352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18506 | |HGNC=18506 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P31 | |UniProt=Q96P31 | ||
|association_with_transcript=-23bp_to_ENST00000368184,NM_052939,uc001fqx.3,uc001fqy.3,uc001fqz.3,uc001frb.2,uc009wsn.2,uc009wso.2_5end | |association_with_transcript=-23bp_to_ENST00000368184,NM_052939,uc001fqx.3,uc001fqy.3,uc001fqz.3,uc001frb.2,uc009wsn.2,uc009wso.2_5end | ||
|cluster_id=chr1:157670670..157670684,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_5_at_FCRL3_5end | |description=CAGE_peak_5_at_FCRL3_5end | ||
|id=chr1:157670670..157670684,- | |id=chr1:157670670..157670684,- | ||
|ontology_enrichment_celltype=CL:0000838!1.85e-41!52;CL:0000542!1.67e-40!53;CL:0000051!1.67e-40!53;CL:0000625!1.38e-29!11;CL:0002087!3.78e-29!119;CL:0000791!2.07e-27!18;CL:0000789!2.07e-27!18;CL:0002420!2.07e-27!18;CL:0002419!2.07e-27!18;CL:0000790!2.07e-27!18;CL:0000738!2.25e-27!140;CL:0002031!8.27e-23!124;CL:0000236!2.57e-20!14;CL:0000037!5.12e-20!172;CL:0000566!5.12e-20!172;CL:0000084!1.18e-18!25;CL:0000827!1.18e-18!25;CL:0000988!2.94e-18!182;CL:0002032!1.02e-17!165;CL:0000837!1.02e-17!165;CL:0000945!1.81e-17!24;CL:0000826!1.81e-17!24;CL:0000623!1.68e-09!3;CL:0000825!1.68e-09!3;CL:0000842!6.13e-09!3;CL:0000767!1.97e-08!3;CL:0000224!8.88e-07!4 | |ontology_enrichment_celltype=CL:0000838!1.85e-41!52;CL:0000542!1.67e-40!53;CL:0000051!1.67e-40!53;CL:0000625!1.38e-29!11;CL:0002087!3.78e-29!119;CL:0000791!2.07e-27!18;CL:0000789!2.07e-27!18;CL:0002420!2.07e-27!18;CL:0002419!2.07e-27!18;CL:0000790!2.07e-27!18;CL:0000738!2.25e-27!140;CL:0002031!8.27e-23!124;CL:0000236!2.57e-20!14;CL:0000037!5.12e-20!172;CL:0000566!5.12e-20!172;CL:0000084!1.18e-18!25;CL:0000827!1.18e-18!25;CL:0000988!2.94e-18!182;CL:0002032!1.02e-17!165;CL:0000837!1.02e-17!165;CL:0000945!1.81e-17!24;CL:0000826!1.81e-17!24;CL:0000623!1.68e-09!3;CL:0000825!1.68e-09!3;CL:0000842!6.13e-09!3;CL:0000767!1.97e-08!3;CL:0000224!8.88e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.14e-48;11!CL:0000791;4.33e-41;18!CL:0000789;4.33e-41;18!CL:0002419;4.33e-41;18!CL:0000084;6.73e-29;25!CL:0000542;1.46e-24;53!CL:0000623;2.18e-17;3!CL:0000226;2.40e-16;3!CL:0000842;2.40e-16;3!CL:0000236;7.04e-14;13!CL:0000815;3.97e-11;2!CL:0000792;3.97e-11;2!CL:0002677;3.97e-11;2!CL:0002087;2.89e-09;104!CL:0000898;1.05e-07;3!CL:0000945;2.91e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.56e-48,11;CL:0000791,3.10e-41,18;CL:0000789,3.10e-41,18;CL:0002420,3.10e-41,18;CL:0002419,3.10e-41,18;CL:0000790,3.10e-41,18;CL:0000838,5.19e-41,52;CL:0000542,3.78e-40,53;CL:0000051,3.78e-40,53;CL:0000084,5.31e-29,25;CL:0000827,5.31e-29,25;CL:0002087,2.20e-23,115;CL:0000738,9.59e-21,136;CL:0000623,1.85e-17,3;CL:0000825,1.85e-17,3;CL:0002031,1.40e-16,120;CL:0000226,2.46e-16,3;CL:0000842,2.46e-16,3;CL:0000037,9.37e-16,168;CL:0000988,1.13e-14,177;CL:0000236,7.97e-13,14;CL:0002032,2.04e-12,161;CL:0000837,2.04e-12,161;CL:0000815,3.40e-11,2;CL:0000792,3.40e-11,2;CL:0002677,3.40e-11,2;CL:0000898,9.52e-08,3;CL:0000945,3.00e-07,24;CL:0000826,3.00e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;4.33e-41;18!CL:0000051;1.46e-24;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.95e-20!15;UBERON:0000179!3.95e-20!15;UBERON:0000463!3.95e-20!15;UBERON:0002193!2.30e-08!112;UBERON:0002390!5.71e-08!102;UBERON:0003061!5.71e-08!102 | |ontology_enrichment_uberon=UBERON:0000178!3.95e-20!15;UBERON:0000179!3.95e-20!15;UBERON:0000463!3.95e-20!15;UBERON:0002193!2.30e-08!112;UBERON:0002390!5.71e-08!102;UBERON:0003061!5.71e-08!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-40;15!UBERON:0000179;2.25e-40;15!UBERON:0000463;2.25e-40;15!UBERON:0002390;1.95e-17;32!UBERON:0002193;3.07e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.90e-40,15;UBERON:0000179,2.90e-40,15;UBERON:0000463,2.90e-40,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.77408061658038,0,0,0,0.232401601740905,0.142169232487422,0,1.10799081706375,0.200544447470142,0.868043482863407,0,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18455444504853,2.66852776159066,0.853460445133014,0.400395987036012,1.72425731986345,2.64417949113945,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0,0.393010762749165,0,0,1.62961133316795,4.2610302516126,0,0.334231370655521,1.47302953737419,1.99380505125259,3.24964636518019,0.128091319725675,0,0,0,0,0,0,0,0,0,1.37450978193052,0.506039384039006,5.09704662918555,5.85975108470777,7.60361635558699,3.46322773878877,5.24745105733115,2.49861453104692,6.15620855314444,3.28451198768419,6.8546292696409,1.87208137048455,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26044572949058,3.88129634747131,3.59360501583295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.50999940573032,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,4.56702848308952,6.117097657139,2.84823593587081,1.42939065274673,2.05681136543097,1.29694662238543,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.875576689189638,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p5@FCRL3 | |short_description=p5@FCRL3 | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p5@FCRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FCRL3_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -23bp_to_ENST00000368184, NM_052939, uc001fqx.3, uc001fqy.3, uc001fqz.3, uc001frb.2, uc009wsn.2, uc009wso.2_5end |
EntrezGene: | FCRL3 |
HGNC: | 18506 |
UniProt: | Q96P31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.56e-48 | 11 |
mature alpha-beta T cell | 3.10e-41 | 18 |
alpha-beta T cell | 3.10e-41 | 18 |
immature T cell | 3.10e-41 | 18 |
mature T cell | 3.10e-41 | 18 |
immature alpha-beta T cell | 3.10e-41 | 18 |
lymphoid lineage restricted progenitor cell | 5.19e-41 | 52 |
lymphocyte | 3.78e-40 | 53 |
common lymphoid progenitor | 3.78e-40 | 53 |
T cell | 5.31e-29 | 25 |
pro-T cell | 5.31e-29 | 25 |
nongranular leukocyte | 2.20e-23 | 115 |
leukocyte | 9.59e-21 | 136 |
natural killer cell | 1.85e-17 | 3 |
pro-NK cell | 1.85e-17 | 3 |
hematopoietic lineage restricted progenitor cell | 1.40e-16 | 120 |
single nucleate cell | 2.46e-16 | 3 |
mononuclear cell | 2.46e-16 | 3 |
hematopoietic stem cell | 9.37e-16 | 168 |
hematopoietic cell | 1.13e-14 | 177 |
B cell | 7.97e-13 | 14 |
hematopoietic oligopotent progenitor cell | 2.04e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-12 | 161 |
regulatory T cell | 3.40e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.40e-11 | 2 |
naive regulatory T cell | 3.40e-11 | 2 |
naive T cell | 9.52e-08 | 3 |
lymphocyte of B lineage | 3.00e-07 | 24 |
pro-B cell | 3.00e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 2.90e-40 | 15 |
haemolymphatic fluid | 2.90e-40 | 15 |
organism substance | 2.90e-40 | 15 |