FFCP PHASE1:Hg19::chr2:61108217..61108242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5966 | |EntrezGene=5966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9954 | |HGNC=9954 | ||
|TSSclassifier=strong | |||
|UniProt=Q04864 | |UniProt=Q04864 | ||
|association_with_transcript=-413bp_to_ENST00000295025_5end | |association_with_transcript=-413bp_to_ENST00000295025_5end | ||
|cluster_id=chr2:61108217..61108242,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_9_at_REL_5end | |description=CAGE_peak_9_at_REL_5end | ||
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|ontology_enrichment_celltype_v019=CL:0000860;2.39e-50;33!CL:0002057;2.39e-50;33!CL:0000473;4.32e-38;39!CL:0000234;4.32e-38;39!CL:0000766;6.61e-28;69!CL:0000576;1.68e-26;48!CL:0000094;1.09e-19;8!CL:0000236;1.92e-15;13!CL:0002087;6.51e-15;104!CL:0000775;2.62e-14;3!CL:0000081;3.75e-14;11!CL:0000763;5.12e-14;100!CL:0000945;3.71e-13;24!CL:0000738;2.32e-11;136!CL:0000771;4.59e-10;2!CL:0000988;1.29e-08;177!CL:0000219;5.32e-08;193 | |ontology_enrichment_celltype_v019=CL:0000860;2.39e-50;33!CL:0002057;2.39e-50;33!CL:0000473;4.32e-38;39!CL:0000234;4.32e-38;39!CL:0000766;6.61e-28;69!CL:0000576;1.68e-26;48!CL:0000094;1.09e-19;8!CL:0000236;1.92e-15;13!CL:0002087;6.51e-15;104!CL:0000775;2.62e-14;3!CL:0000081;3.75e-14;11!CL:0000763;5.12e-14;100!CL:0000945;3.71e-13;24!CL:0000738;2.32e-11;136!CL:0000771;4.59e-10;2!CL:0000988;1.29e-08;177!CL:0000219;5.32e-08;193 | ||
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|ontology_enrichment_development_v019=CL:0002057;1.23e-40;42!CL:0000049;1.16e-09;108 | |ontology_enrichment_development_v019=CL:0002057;1.23e-40;42!CL:0000049;1.16e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.69e-37!102;UBERON:0003061!4.69e-37!102;UBERON:0002371!2.42e-36!80;UBERON:0002193!1.42e-34!112;UBERON:0001474!1.63e-32!86;UBERON:0002405!2.48e-27!115;UBERON:0004765!5.37e-25!101;UBERON:0001434!5.37e-25!101;UBERON:0002384!3.94e-18!375;UBERON:0003081!6.09e-11!216;UBERON:0002204!8.75e-10!167 | |ontology_enrichment_uberon=UBERON:0002390!4.69e-37!102;UBERON:0003061!4.69e-37!102;UBERON:0002371!2.42e-36!80;UBERON:0002193!1.42e-34!112;UBERON:0001474!1.63e-32!86;UBERON:0002405!2.48e-27!115;UBERON:0004765!5.37e-25!101;UBERON:0001434!5.37e-25!101;UBERON:0002384!3.94e-18!375;UBERON:0003081!6.09e-11!216;UBERON:0002204!8.75e-10!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.39e-39,76;UBERON:0001474,1.61e-35,82;UBERON:0002390,2.56e-33,98;UBERON:0003061,2.56e-33,98;UBERON:0004765,8.18e-32,90;UBERON:0002405,1.38e-30,93;UBERON:0002193,1.27e-29,108;UBERON:0001434,5.22e-28,100;UBERON:0002384,1.28e-15,371;UBERON:0002204,3.11e-14,167;UBERON:0003081,1.28e-12,203 | |||
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|short_description=p9@REL | |short_description=p9@REL | ||
}} | }} |
Latest revision as of 20:41, 17 September 2015
Short description: | p9@REL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_REL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -413bp_to_ENST00000295025_5end |
EntrezGene: | REL |
HGNC: | 9954 |
UniProt: | Q04864 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.39e-39 | 76 |
bone element | 1.61e-35 | 82 |
hematopoietic system | 2.56e-33 | 98 |
blood island | 2.56e-33 | 98 |
skeletal element | 8.18e-32 | 90 |
immune system | 1.38e-30 | 93 |
hemolymphoid system | 1.27e-29 | 108 |
skeletal system | 5.22e-28 | 100 |
connective tissue | 1.28e-15 | 371 |
musculoskeletal system | 3.11e-14 | 167 |
lateral plate mesoderm | 1.28e-12 | 203 |