FFCP PHASE1:Hg19::chr2:61108695..61108753,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:61108695..61108753,+ to FFCP PHASE1:Hg19::chr2:61108695..61108753,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5966 | |EntrezGene=5966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9954 | |HGNC=9954 | ||
|TSSclassifier=strong | |||
|UniProt=Q04864,Q17RU2 | |UniProt=Q04864,Q17RU2 | ||
|association_with_transcript=0bp_to_NM_002908,uc002sam.1,uc002san.1_5end | |||
|cluster_id=chr2:61108695..61108753,+ | |||
|coexpression_cluster_id=C1685 | |||
|description=CAGE_peak_1_at_REL_5end | |||
|id=chr2:61108695..61108753,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.23e-56!140;CL:0000037!6.79e-54!172;CL:0000566!6.79e-54!172;CL:0002032!1.01e-50!165;CL:0000837!1.01e-50!165;CL:0000988!1.91e-49!182;CL:0002031!2.95e-45!124;CL:0002087!1.99e-43!119;CL:0000766!1.24e-33!76;CL:0000763!4.99e-33!112;CL:0000049!4.99e-33!112;CL:0000557!1.83e-30!71;CL:0000839!3.26e-28!70;CL:0002009!4.35e-27!65;CL:0002194!8.50e-26!63;CL:0000576!8.50e-26!63;CL:0000040!8.50e-26!63;CL:0000559!8.50e-26!63;CL:0002057!2.44e-25!42;CL:0000860!1.82e-23!45;CL:0000542!2.73e-15!53;CL:0000051!2.73e-15!53;CL:0000838!6.12e-15!52;CL:0000945!4.51e-09!24;CL:0000826!4.51e-09!24;CL:0000451!2.01e-07!10;CL:0000236!3.85e-07!14;CL:0000791!5.74e-07!18;CL:0000789!5.74e-07!18;CL:0002420!5.74e-07!18;CL:0002419!5.74e-07!18;CL:0000790!5.74e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-19;33!CL:0002057;8.29e-19;33!CL:0000473;1.96e-17;39!CL:0000234;1.96e-17;39!CL:0000576;1.08e-16;48!CL:0000766;1.70e-15;69!CL:0002087;2.73e-13;104!CL:0000738;2.09e-12;136!CL:0000542;1.22e-09;53!CL:0000763;1.67e-09;100!CL:0000988;2.25e-09;177!CL:0000945;3.51e-09;24!CL:0000451;1.86e-07;10!CL:0000236;5.07e-07;13!CL:0000791;5.19e-07;18!CL:0000789;5.19e-07;18!CL:0002419;5.19e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.56e-58,136;CL:0000037,9.40e-56,168;CL:0002032,1.45e-52,161;CL:0000837,1.45e-52,161;CL:0000988,1.27e-51,177;CL:0002031,2.01e-47,120;CL:0002087,1.33e-45,115;CL:0000766,3.00e-36,72;CL:0000763,7.29e-35,108;CL:0000049,7.29e-35,108;CL:0000557,5.07e-33,67;CL:0000839,1.22e-30,66;CL:0002009,1.36e-29,61;CL:0002194,2.88e-28,59;CL:0000576,2.88e-28,59;CL:0000040,2.88e-28,59;CL:0000559,2.88e-28,59;CL:0000473,3.19e-27,48;CL:0000234,3.19e-27,48;CL:0000860,2.40e-25,42;CL:0002057,2.40e-25,42;CL:0000542,2.70e-15,53;CL:0000051,2.70e-15,53;CL:0000838,6.06e-15,52;CL:0000945,4.49e-09,24;CL:0000826,4.49e-09,24;CL:0000451,2.00e-07,10;CL:0000236,3.83e-07,14;CL:0000791,5.71e-07,18;CL:0000789,5.71e-07,18;CL:0002420,5.71e-07,18;CL:0002419,5.71e-07,18;CL:0000790,5.71e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-18;42!CL:0000051;1.22e-09;53!CL:0000049;1.26e-09;108!CL:0000790;5.19e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-33!102;UBERON:0003061!1.61e-33!102;UBERON:0002193!2.26e-33!112;UBERON:0002371!9.03e-25!80;UBERON:0001474!9.72e-24!86;UBERON:0002405!5.20e-21!115;UBERON:0004765!4.19e-17!101;UBERON:0001434!4.19e-17!101;UBERON:0007023!4.45e-08!115;UBERON:0000178!1.73e-07!15;UBERON:0000179!1.73e-07!15;UBERON:0000463!1.73e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.72e-35,98;UBERON:0003061,1.72e-35,98;UBERON:0002193,3.12e-35,108;UBERON:0002405,1.59e-28,93;UBERON:0002371,1.15e-26,76;UBERON:0001474,1.86e-25,82;UBERON:0004765,1.30e-21,90;UBERON:0001434,9.50e-17,100;UBERON:0007023,3.97e-08,114;UBERON:0000178,1.72e-07,15;UBERON:0000179,1.72e-07,15;UBERON:0000463,1.72e-07,15 | |||
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| ||
|short_description=p1@REL | |||
}} | }} |
Latest revision as of 20:44, 17 September 2015
Short description: | p1@REL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REL_5end |
Coexpression cluster: | C1685_immature_CD14_Eosinophils_CD34_migratory_lymphoma_Neutrophils |
Association with transcript: | 0bp_to_NM_002908, uc002sam.1, uc002san.1_5end |
EntrezGene: | REL |
HGNC: | 9954 |
UniProt: | Q04864Q17RU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.72e-35 | 98 |
blood island | 1.72e-35 | 98 |
hemolymphoid system | 3.12e-35 | 108 |
immune system | 1.59e-28 | 93 |
bone marrow | 1.15e-26 | 76 |
bone element | 1.86e-25 | 82 |
skeletal element | 1.30e-21 | 90 |
skeletal system | 9.50e-17 | 100 |
adult organism | 3.97e-08 | 114 |
blood | 1.72e-07 | 15 |
haemolymphatic fluid | 1.72e-07 | 15 |
organism substance | 1.72e-07 | 15 |