FFCP PHASE1:Hg19::chr8:28747682..28747705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55756 | |EntrezGene=55756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25592 | |HGNC=25592 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6M5,Q9NV88 | |UniProt=B7Z6M5,Q9NV88 | ||
|association_with_transcript=0bp_to_NM_001145159,NM_018250,NR_026826,uc003xha.2,uc003xhb.2,uc010lvc.2,uc011law.1,uc011lax.1_5end | |association_with_transcript=0bp_to_NM_001145159,NM_018250,NR_026826,uc003xha.2,uc003xhb.2,uc010lvc.2,uc011law.1,uc011lax.1_5end | ||
|cluster_id=chr8:28747682..28747705,- | |||
|description=CAGE_peak_2_at_INTS9_5end | |description=CAGE_peak_2_at_INTS9_5end | ||
|id=chr8:28747682..28747705,- | |id=chr8:28747682..28747705,- | ||
|ontology_enrichment_celltype=CL:0000542!3.69e-33!53;CL:0000051!3.69e-33!53;CL:0000838!1.13e-32!52;CL:0000037!1.87e-21!172;CL:0000566!1.87e-21!172;CL:0000988!1.99e-21!182;CL:0000738!3.38e-19!140;CL:0002032!4.66e-19!165;CL:0000837!4.66e-19!165;CL:0000945!9.61e-18!24;CL:0000826!9.61e-18!24;CL:0002087!1.19e-16!119;CL:0002031!3.76e-15!124;CL:0000084!6.68e-14!25;CL:0000827!6.68e-14!25;CL:0000791!1.11e-13!18;CL:0000789!1.11e-13!18;CL:0002420!1.11e-13!18;CL:0002419!1.11e-13!18;CL:0000790!1.11e-13!18;CL:0000236!6.21e-12!14;CL:0000625!9.28e-10!11 | |ontology_enrichment_celltype=CL:0000542!3.69e-33!53;CL:0000051!3.69e-33!53;CL:0000838!1.13e-32!52;CL:0000037!1.87e-21!172;CL:0000566!1.87e-21!172;CL:0000988!1.99e-21!182;CL:0000738!3.38e-19!140;CL:0002032!4.66e-19!165;CL:0000837!4.66e-19!165;CL:0000945!9.61e-18!24;CL:0000826!9.61e-18!24;CL:0002087!1.19e-16!119;CL:0002031!3.76e-15!124;CL:0000084!6.68e-14!25;CL:0000827!6.68e-14!25;CL:0000791!1.11e-13!18;CL:0000789!1.11e-13!18;CL:0002420!1.11e-13!18;CL:0002419!1.11e-13!18;CL:0000790!1.11e-13!18;CL:0000236!6.21e-12!14;CL:0000625!9.28e-10!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.24e-40;53!CL:0000945;1.52e-37;24!CL:0000791;1.75e-30;18!CL:0000789;1.75e-30;18!CL:0002419;1.75e-30;18!CL:0000236;1.73e-28;13!CL:0000625;2.84e-27;11!CL:0000084;2.74e-24;25!CL:0002087;2.51e-11;104!CL:0000623;6.64e-10;3!CL:0000624;8.32e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.96e-68,52;CL:0000542,1.18e-66,53;CL:0000051,1.18e-66,53;CL:0000945,4.19e-37,24;CL:0000826,4.19e-37,24;CL:0000791,7.27e-31,18;CL:0000789,7.27e-31,18;CL:0002420,7.27e-31,18;CL:0002419,7.27e-31,18;CL:0000790,7.27e-31,18;CL:0000236,1.49e-30,14;CL:0002087,1.54e-28,115;CL:0000625,1.49e-27,11;CL:0000738,1.10e-25,136;CL:0000084,1.31e-24,25;CL:0000827,1.31e-24,25;CL:0002031,1.03e-23,120;CL:0000037,3.59e-20,168;CL:0000988,1.27e-18,177;CL:0002032,8.70e-18,161;CL:0000837,8.70e-18,161;CL:0000623,9.91e-10,3;CL:0000825,9.91e-10,3;CL:0000817,2.49e-09,3;CL:0000624,6.31e-08,6;CL:0000785,4.73e-07,2;CL:0000955,4.73e-07,2;CL:0000818,4.73e-07,2;CL:0000954,4.73e-07,2;CL:0000816,4.73e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.24e-40;53!CL:0000790;1.75e-30;18!CL:0000954;3.31e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!8.17e-08!51;DOID:0060083!8.17e-08!51 | |ontology_enrichment_disease=DOID:2531!8.17e-08!51;DOID:0060083!8.17e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;4.66e-15;5!UBERON:0005057;4.66e-15;5!UBERON:0002106;3.51e-09;3!UBERON:0002370;1.37e-07;2!UBERON:0005058;1.37e-07;2!UBERON:0009113;1.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.11e-14,7;UBERON:0005057,1.11e-14,7;UBERON:0002106,6.12e-09,3;UBERON:0004854,6.12e-09,3;UBERON:0009034,6.12e-09,3;UBERON:0002095,6.12e-09,3;UBERON:0004782,6.12e-09,3;UBERON:0003281,6.12e-09,3;UBERON:0009664,6.12e-09,3;UBERON:0002296,6.12e-09,3;UBERON:0005602,6.12e-09,3;UBERON:0001179,6.12e-09,3;UBERON:0006293,6.12e-09,3;UBERON:0002370,1.32e-07,4;UBERON:0005058,1.32e-07,4;UBERON:0009113,1.32e-07,4;UBERON:0003295,1.32e-07,4;UBERON:0005562,1.32e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,1.06978768047132,0.903106483949403,1.73163718890094,0.786728553697808,2.68680578668049,0.464448369948228,0.919421224478927,0.30120591877825,0.369754010166788,1.31694240986513,1.13735385989937,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0.637812899895131,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0,0.365328307529268,3.51992488922645,4.36910889009705,0.889509253863555,4.26730222566507,2.00197993518006,4.02326707968138,0.661044872784862,5.72432252721218,2.27685187643779,2.93618594685469,2.29363936875137,2.64342657158052,0.560508562981536,0.263384084775077,1.7703879310245,0.393010762749165,1.43921049299656,1.17030546773475,1.62961133316795,3.78758244587787,0,0.779873198196215,0.883817722424512,1.32920336750173,1.89562704635511,0.128091319725675,0.780356085359269,0.328875809207352,0.552700035571697,1.44901542867526,1.4828656316206,1.07016331235885,0,0.793165398882963,1.14966148080576,2.74901956386104,2.27717722817553,2.22995790026868,2.60433381542567,1.90090408889675,2.55977702432214,3.58362511232371,3.74792179657038,3.07810427657222,3.28451198768419,2.41928091869679,0.534880391567015,1.73789284659359,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.261958150995425,0,0,0.649094787309367,0,0.26591592103773,0.715471872916026,1.14398982156026,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0,0,0.487894824518382,0,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0.16798212819886,0,0.268675568108545,0,0,0,0.44024217006613,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.448340575974109,2.1673383622212,2.15627574859517,1.41177339907723,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.6541442089831,0.862856803274467,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0.657779629937804,0.522870902049801,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,1.19115887728894,0.411362273086194,0.648473311192717,1.62009431171434,0,0.213648142254946,0,0,0.557409525377156,1.00988449083511,2.63224820389132,0.797131363644112,0.997896857164083,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.802940375518498,0.80719882876419,0.851692475380653,0,0,0.223676107892416,0.166849141711909,0,0,2.46174797895425,0.540911356951966,0.33307196799782,0,0.561421621224659,0,0.242721043499027,0,0,0,0,0,0,0.562677665642051,0,0.494411622680279,0.211125408127993,0,1.93398740871803,0.503865495708552,0.306806047506464,1.96935688737711,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0.185536196323703,1.99613798001194,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,0.347249989866585,0,0.60298219312704,0,0.995213339381022,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0.325942115766024,0,0.0915975934018623,0,0,0.31396051279005,0.831058409500782,0.225595660617181,0.784250137270958,0.671286347903371,0.75901493089674,0.635746315921515,0,0,0.282706142867882,0,0,0,0,0.296521128680622,0.741383633679017,0.208843899010911,0.337005664903385,0.802577647298789,0.234264445725339,3.46664099509765,0,0.485560759068186,0,1.20990716048664,0,0.31593289814244,0.60129367765797,0.207376382794494,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.36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| ||
|short_description=p2@INTS9 | |short_description=p2@INTS9 | ||
}} | }} |
Latest revision as of 20:58, 17 September 2015
Short description: | p2@INTS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_INTS9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001145159, NM_018250, NR_026826, uc003xha.2, uc003xhb.2, uc010lvc.2, uc011law.1, uc011lax.1_5end |
EntrezGene: | INTS9 |
HGNC: | 25592 |
UniProt: | B7Z6M5Q9NV88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.96e-68 | 52 |
lymphocyte | 1.18e-66 | 53 |
common lymphoid progenitor | 1.18e-66 | 53 |
lymphocyte of B lineage | 4.19e-37 | 24 |
pro-B cell | 4.19e-37 | 24 |
mature alpha-beta T cell | 7.27e-31 | 18 |
alpha-beta T cell | 7.27e-31 | 18 |
immature T cell | 7.27e-31 | 18 |
mature T cell | 7.27e-31 | 18 |
immature alpha-beta T cell | 7.27e-31 | 18 |
B cell | 1.49e-30 | 14 |
nongranular leukocyte | 1.54e-28 | 115 |
CD8-positive, alpha-beta T cell | 1.49e-27 | 11 |
leukocyte | 1.10e-25 | 136 |
T cell | 1.31e-24 | 25 |
pro-T cell | 1.31e-24 | 25 |
hematopoietic lineage restricted progenitor cell | 1.03e-23 | 120 |
hematopoietic stem cell | 3.59e-20 | 168 |
hematopoietic cell | 1.27e-18 | 177 |
hematopoietic oligopotent progenitor cell | 8.70e-18 | 161 |
hematopoietic multipotent progenitor cell | 8.70e-18 | 161 |
natural killer cell | 9.91e-10 | 3 |
pro-NK cell | 9.91e-10 | 3 |
precursor B cell | 2.49e-09 | 3 |
CD4-positive, alpha-beta T cell | 6.31e-08 | 6 |
mature B cell | 4.73e-07 | 2 |
pre-B-II cell | 4.73e-07 | 2 |
transitional stage B cell | 4.73e-07 | 2 |
small pre-B-II cell | 4.73e-07 | 2 |
immature B cell | 4.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.11e-14 | 7 |
immune organ | 1.11e-14 | 7 |
spleen | 6.12e-09 | 3 |
gastrointestinal system mesentery | 6.12e-09 | 3 |
stomach region | 6.12e-09 | 3 |
mesentery | 6.12e-09 | 3 |
gastrointestinal system serosa | 6.12e-09 | 3 |
mesentery of stomach | 6.12e-09 | 3 |
gut mesentery | 6.12e-09 | 3 |
dorsal mesentery | 6.12e-09 | 3 |
dorsal mesogastrium | 6.12e-09 | 3 |
peritoneal cavity | 6.12e-09 | 3 |
spleen primordium | 6.12e-09 | 3 |
thymus | 1.32e-07 | 4 |
hemolymphoid system gland | 1.32e-07 | 4 |
thymic region | 1.32e-07 | 4 |
pharyngeal gland | 1.32e-07 | 4 |
thymus primordium | 1.32e-07 | 4 |