FFCP PHASE1:Hg19::chr3:27764190..27764208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8320 | |EntrezGene=8320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3372 | |HGNC=3372 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3U2,B7ZA51 | |UniProt=F5H3U2,B7ZA51 | ||
|association_with_transcript=0bp_to_ENST00000461503,ENST00000535713,ENST00000537516,uc011axc.1_5end | |association_with_transcript=0bp_to_ENST00000461503,ENST00000535713,ENST00000537516,uc011axc.1_5end | ||
|cluster_id=chr3:27764190..27764208,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_2_at_EOMES_5end | |description=CAGE_peak_2_at_EOMES_5end | ||
|id=chr3:27764190..27764208,- | |id=chr3:27764190..27764208,- | ||
|ontology_enrichment_celltype=CL:0000625!4.12e-16!11;CL:0000047!1.30e-11!8;CL:0000791!1.18e-10!18;CL:0000789!1.18e-10!18;CL:0002420!1.18e-10!18;CL:0002419!1.18e-10!18;CL:0000790!1.18e-10!18;CL:0000084!1.40e-09!25;CL:0000827!1.40e-09!25;CL:0002322!2.37e-09!5;CL:0000540!3.65e-08!6;CL:0000031!3.65e-08!6;CL:0000404!3.65e-08!6;CL:0000838!6.55e-08!52;CL:0000542!1.14e-07!53;CL:0000051!1.14e-07!53;CL:0002319!1.16e-07!25;CL:0000148!1.34e-07!10;CL:0000541!1.34e-07!10 | |ontology_enrichment_celltype=CL:0000625!4.12e-16!11;CL:0000047!1.30e-11!8;CL:0000791!1.18e-10!18;CL:0000789!1.18e-10!18;CL:0002420!1.18e-10!18;CL:0002419!1.18e-10!18;CL:0000790!1.18e-10!18;CL:0000084!1.40e-09!25;CL:0000827!1.40e-09!25;CL:0002322!2.37e-09!5;CL:0000540!3.65e-08!6;CL:0000031!3.65e-08!6;CL:0000404!3.65e-08!6;CL:0000838!6.55e-08!52;CL:0000542!1.14e-07!53;CL:0000051!1.14e-07!53;CL:0002319!1.16e-07!25;CL:0000148!1.34e-07!10;CL:0000541!1.34e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000625;8.13e-22;11!CL:0000540;1.01e-14;6!CL:0000404;1.01e-14;6!CL:0002319;2.38e-14;25!CL:0000791;5.38e-13;18!CL:0000789;5.38e-13;18!CL:0002419;5.38e-13;18!CL:0000047;9.30e-12;2!CL:0000084;4.15e-09;25!CL:0002605;7.91e-08;3!CL:0000128;4.32e-07;7!CL:0000126;4.32e-07;7!CL:0000127;4.32e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.95e-24,8;CL:0000625,7.52e-22,11;CL:0000540,1.08e-14,6;CL:0000031,1.08e-14,6;CL:0000404,1.08e-14,6;CL:0002319,2.42e-14,25;CL:0000791,5.14e-13,18;CL:0000789,5.14e-13,18;CL:0002420,5.14e-13,18;CL:0002419,5.14e-13,18;CL:0000790,5.14e-13,18;CL:0000084,4.02e-09,25;CL:0000827,4.02e-09,25;CL:0000133,2.84e-08,59;CL:0000838,3.25e-08,52;CL:0000542,5.02e-08,53;CL:0000051,5.02e-08,53;CL:0002605,7.65e-08,3;CL:0000128,4.23e-07,7;CL:0000126,4.23e-07,7;CL:0000127,4.23e-07,7;CL:0002453,4.23e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;1.01e-14;6!CL:0000790;5.38e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-11!115;UBERON:0005743!7.45e-09!86;UBERON:0001017!8.59e-09!82;UBERON:0002680!2.85e-08!9;UBERON:0001895!2.85e-08!9;UBERON:0010092!2.85e-08!9;UBERON:0000178!3.02e-08!15;UBERON:0000179!3.02e-08!15;UBERON:0000463!3.02e-08!15;UBERON:0004733!1.63e-07!12;UBERON:0002028!1.63e-07!12;UBERON:0007277!1.63e-07!12;UBERON:0000073!2.33e-07!94;UBERON:0001016!2.33e-07!94;UBERON:0004732!7.94e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!1.97e-11!115;UBERON:0005743!7.45e-09!86;UBERON:0001017!8.59e-09!82;UBERON:0002680!2.85e-08!9;UBERON:0001895!2.85e-08!9;UBERON:0010092!2.85e-08!9;UBERON:0000178!3.02e-08!15;UBERON:0000179!3.02e-08!15;UBERON:0000463!3.02e-08!15;UBERON:0004733!1.63e-07!12;UBERON:0002028!1.63e-07!12;UBERON:0007277!1.63e-07!12;UBERON:0000073!2.33e-07!94;UBERON:0001016!2.33e-07!94;UBERON:0004732!7.94e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.22e-08;15!UBERON:0000179;4.22e-08;15!UBERON:0000463;4.22e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.91e-08,15;UBERON:0000179,3.91e-08,15;UBERON:0000463,3.91e-08,15;UBERON:0001017,4.31e-08,81;UBERON:0001016,4.76e-07,89 | |||
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| ||
|short_description=p2@EOMES | |short_description=p2@EOMES | ||
}} | }} |
Latest revision as of 21:18, 17 September 2015
Short description: | p2@EOMES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EOMES_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000461503, ENST00000535713, ENST00000537516, uc011axc.1_5end |
EntrezGene: | EOMES |
HGNC: | 3372 |
UniProt: | F5H3U2B7ZA51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.95e-24 | 8 |
CD8-positive, alpha-beta T cell | 7.52e-22 | 11 |
neuron | 1.08e-14 | 6 |
neuroblast | 1.08e-14 | 6 |
electrically signaling cell | 1.08e-14 | 6 |
neural cell | 2.42e-14 | 25 |
mature alpha-beta T cell | 5.14e-13 | 18 |
alpha-beta T cell | 5.14e-13 | 18 |
immature T cell | 5.14e-13 | 18 |
mature T cell | 5.14e-13 | 18 |
immature alpha-beta T cell | 5.14e-13 | 18 |
T cell | 4.02e-09 | 25 |
pro-T cell | 4.02e-09 | 25 |
neurectodermal cell | 2.84e-08 | 59 |
lymphoid lineage restricted progenitor cell | 3.25e-08 | 52 |
lymphocyte | 5.02e-08 | 53 |
common lymphoid progenitor | 5.02e-08 | 53 |
astrocyte of the cerebral cortex | 7.65e-08 | 3 |
oligodendrocyte | 4.23e-07 | 7 |
macroglial cell | 4.23e-07 | 7 |
astrocyte | 4.23e-07 | 7 |
oligodendrocyte precursor cell | 4.23e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
blood | 3.91e-08 | 15 |
haemolymphatic fluid | 3.91e-08 | 15 |
organism substance | 3.91e-08 | 15 |
central nervous system | 4.31e-08 | 81 |
nervous system | 4.76e-07 | 89 |