FFCP PHASE1:Hg19::chr17:76355003..76355020,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:76355003..76355020,-
|short_description=p9@SOCS3
|description=CAGE_peak_9_at_SOCS3_5end
|association_with_transcript=155bp_to_AB006967,AF159854,BT019544,C...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9021 | |EntrezGene=9021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19391 | |HGNC=19391 | ||
|TSSclassifier=strong | |||
|UniProt=O14543,Q5U0H7,Q6FI39 | |UniProt=O14543,Q5U0H7,Q6FI39 | ||
|association_with_transcript=155bp_to_AB006967,AF159854,BT019544,CR536497,CR541694_5end | |||
|cluster_id=chr17:76355003..76355020,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_SOCS3_5end | |||
|id=chr17:76355003..76355020,- | |||
|ontology_enrichment_celltype=CL:0002057!2.99e-27!42;CL:0000860!5.84e-27!45;CL:0000557!2.09e-17!71;CL:0000766!2.73e-17!76;CL:0000839!1.03e-16!70;CL:0002009!1.10e-16!65;CL:0002194!1.85e-16!63;CL:0000576!1.85e-16!63;CL:0000040!1.85e-16!63;CL:0000559!1.85e-16!63;CL:0000738!8.24e-14!140;CL:0002087!8.67e-12!119;CL:0002031!2.41e-11!124;CL:0000763!2.49e-09!112;CL:0000049!2.49e-09!112;CL:0000988!6.03e-09!182;CL:0000037!3.28e-08!172;CL:0000566!3.28e-08!172;CL:0002032!3.21e-07!165;CL:0000837!3.21e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.96e-80;33!CL:0002057;6.96e-80;33!CL:0000473;1.08e-56;39!CL:0000234;1.08e-56;39!CL:0000576;2.87e-41;48!CL:0000766;6.32e-28;69!CL:0002087;1.04e-13;104!CL:0000763;3.06e-12;100!CL:0000738;1.45e-07;136!CL:0000746;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-79,42;CL:0002057,1.68e-79,42;CL:0000473,8.47e-69,48;CL:0000234,8.47e-69,48;CL:0002194,8.20e-54,59;CL:0000576,8.20e-54,59;CL:0000040,8.20e-54,59;CL:0000559,8.20e-54,59;CL:0002009,7.04e-52,61;CL:0000839,2.82e-51,66;CL:0000557,1.99e-50,67;CL:0000766,1.53e-46,72;CL:0002087,7.14e-34,115;CL:0002031,3.26e-32,120;CL:0000738,1.09e-29,136;CL:0000763,4.42e-29,108;CL:0000049,4.42e-29,108;CL:0000037,9.39e-23,168;CL:0002032,2.44e-22,161;CL:0000837,2.44e-22,161;CL:0000988,2.98e-21,177;CL:0000134,2.91e-11,354;CL:0002320,6.75e-11,361;CL:0000048,1.26e-09,427;CL:0000219,1.31e-09,386;CL:0000723,2.20e-09,433;CL:0000034,4.54e-09,441;CL:0000746,2.19e-07,3;CL:0000513,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-59;42!CL:0000049;1.62e-08;108!CL:0000513;2.19e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.29e-15!80;UBERON:0002390!3.09e-15!102;UBERON:0003061!3.09e-15!102;UBERON:0002193!3.70e-15!112;UBERON:0001474!3.90e-15!86;UBERON:0004765!4.53e-14!101;UBERON:0001434!4.53e-14!101;UBERON:0002405!2.54e-13!115;UBERON:0002204!1.35e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.51e-44,76;UBERON:0001474,3.57e-40,82;UBERON:0004765,4.38e-36,90;UBERON:0002390,3.31e-35,98;UBERON:0003061,3.31e-35,98;UBERON:0002405,9.88e-35,93;UBERON:0001434,6.93e-32,100;UBERON:0002193,2.22e-31,108;UBERON:0002204,1.06e-19,167;UBERON:0003081,1.18e-17,203;UBERON:0002384,2.13e-10,371;UBERON:0000926,8.62e-10,315;UBERON:0004120,8.62e-10,315;UBERON:0006603,8.62e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0.273748850145768,0,0,0.0821005894499457,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,2.00544447470142,1.30206522429511,0,0,0,0,0.377875943688809,0,1.16214518452842,1.6446715520873,1.23882548358041,9.20615655430881,5.12321413058201,4.96612682766029,3.44745680736619,3.22742341791913,6.77132432971709,1.12945403725563,0.818718450173537,0.449446968890169,10.4068523406107,5.45579346029359,6.39337125799041,3.95821560224059,3.98927315243264,6.39337125799041,8.41606792022894,7.37600792098482,7.4738669879469,6.02996796616184,6.77927793946262,3.04064382587163,2.42159801053347,2.20966581592539,1.89877432464531,0.211255286311942,0.212604299965044,0,0.22465726229299,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96505381374582,2.67281948699362,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,1.60464117470104,0,2.43806866313962,2.01210257911091,0,0,0,1.01392563272577,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.829312462163088,0.576479813667846,1.38866676769018,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.646882724578552,0.513372145118994,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0.587403472388222,0,0.620304078368662,0.862856803274467,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0.614014698904518,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0.988823245360557,0,0.398495976502139,0.276283915531148,0,0,0.246169610922139,0,0.0898683511473268,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56203764501618,0,0.0870592065804026,0,0,0,0.146178634172371,0.0821154570532092,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,1.6135860539956,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0,0,0,0.427149650270779,0,0.828478110694391,0.496166021811951,0.197611631897944,0,0,2.1760712134779,1.5041393641362,0.919036730290385,0.983617892129413,0,0,0.732157589411779,0.250381861413,0,0,0.0620964029413835,0,0,0,0.856396000634902,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.223710863595585,0,0,0,0.513314034281235,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0.785233868459781,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| ||
|short_description=p9@SOCS3 | |||
}} | }} |
Latest revision as of 21:23, 17 September 2015
Short description: | p9@SOCS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SOCS3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 155bp_to_AB006967, AF159854, BT019544, CR536497, CR541694_5end |
EntrezGene: | SOCS3 |
HGNC: | 19391 |
UniProt: | O14543Q5U0H7Q6FI39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-79 | 42 |
defensive cell | 8.47e-69 | 48 |
phagocyte | 8.47e-69 | 48 |
monopoietic cell | 8.20e-54 | 59 |
monocyte | 8.20e-54 | 59 |
monoblast | 8.20e-54 | 59 |
promonocyte | 8.20e-54 | 59 |
macrophage dendritic cell progenitor | 7.04e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.82e-51 | 66 |
granulocyte monocyte progenitor cell | 1.99e-50 | 67 |
myeloid leukocyte | 1.53e-46 | 72 |
nongranular leukocyte | 7.14e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 3.26e-32 | 120 |
leukocyte | 1.09e-29 | 136 |
myeloid cell | 4.42e-29 | 108 |
common myeloid progenitor | 4.42e-29 | 108 |
hematopoietic stem cell | 9.39e-23 | 168 |
hematopoietic oligopotent progenitor cell | 2.44e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-22 | 161 |
hematopoietic cell | 2.98e-21 | 177 |
mesenchymal cell | 2.91e-11 | 354 |
connective tissue cell | 6.75e-11 | 361 |
multi fate stem cell | 1.26e-09 | 427 |
motile cell | 1.31e-09 | 386 |
somatic stem cell | 2.20e-09 | 433 |
stem cell | 4.54e-09 | 441 |
cardiac muscle cell | 2.19e-07 | 3 |
cardiac muscle myoblast | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.51e-44 | 76 |
bone element | 3.57e-40 | 82 |
skeletal element | 4.38e-36 | 90 |
hematopoietic system | 3.31e-35 | 98 |
blood island | 3.31e-35 | 98 |
immune system | 9.88e-35 | 93 |
skeletal system | 6.93e-32 | 100 |
hemolymphoid system | 2.22e-31 | 108 |
musculoskeletal system | 1.06e-19 | 167 |
lateral plate mesoderm | 1.18e-17 | 203 |
connective tissue | 2.13e-10 | 371 |
mesoderm | 8.62e-10 | 315 |
mesoderm-derived structure | 8.62e-10 | 315 |
presumptive mesoderm | 8.62e-10 | 315 |