FFCP PHASE1:Hg19::chr16:75285612..75285626,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9564 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=971 | |||
|TSSclassifier=strong | |||
|UniProt=F8WA69,P56945,Q6QEF7,B2RBL9,B4DIW5 | |||
|association_with_transcript=-86bp_to_ENST00000393420,NM_001170717,NM_014567_5end | |||
|cluster_id=chr16:75285612..75285626,- | |||
|coexpression_cluster_id=C2390 | |||
|description=CAGE_peak_4_at_BCAR1_5end | |||
|id=chr16:75285612..75285626,- | |||
|ontology_enrichment_celltype=CL:0000222!3.90e-22!119;CL:0000220!2.56e-19!246;CL:0002321!4.17e-19!248;CL:0000115!4.70e-17!35;CL:0002139!2.07e-16!24;CL:0000213!4.08e-16!57;CL:0000215!4.08e-16!57;CL:0002078!2.72e-15!44;CL:0000055!1.29e-13!180;CL:0000071!6.75e-13!18;CL:0002546!6.75e-13!18;CL:0000076!6.26e-10!62;CL:0000183!1.63e-08!59;CL:0000066!9.79e-08!254;CL:0000057!1.11e-07!75;CL:1000413!5.92e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.35e-21;24!CL:0000115;1.93e-20;36!CL:0000071;8.44e-17;18!CL:0000213;1.15e-14;58!CL:0000215;1.15e-14;58!CL:0002078;3.09e-13;45!CL:1000413;9.94e-09;9!CL:1000746;2.07e-07;7!CL:1000612;2.07e-07;7!CL:0002543;4.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.69e-25,121;CL:0000115,5.00e-25,36;CL:0000213,1.44e-23,58;CL:0000215,1.44e-23,58;CL:0002139,1.05e-21,24;CL:0002078,2.62e-21,45;CL:0000071,6.20e-17,18;CL:0002546,6.20e-17,18;CL:0002321,1.33e-15,250;CL:1000413,6.98e-09,9;CL:0000076,7.22e-09,63;CL:1000746,2.71e-07,7;CL:1000612,2.71e-07,7;CL:0002543,4.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.44e-17;18!CL:0000222;1.80e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.02e-21!312;UBERON:0000475!1.12e-20!365;UBERON:0002049!1.56e-20!79;UBERON:0007798!1.56e-20!79;UBERON:0000483!3.51e-20!309;UBERON:0004111!3.67e-19!241;UBERON:0000477!1.33e-18!286;UBERON:0000055!1.50e-16!69;UBERON:0000025!3.04e-16!194;UBERON:0000468!1.03e-14!659;UBERON:0003914!1.18e-13!118;UBERON:0001981!3.18e-13!60;UBERON:0007500!3.18e-13!60;UBERON:0004537!3.18e-13!60;UBERON:0006965!3.18e-13!60;UBERON:0001986!6.75e-13!18;UBERON:0004638!6.75e-13!18;UBERON:0004852!6.75e-13!18;UBERON:0004872!2.51e-12!84;UBERON:0000481!2.62e-12!347;UBERON:0004535!4.80e-12!110;UBERON:0001009!8.94e-12!113;UBERON:0000467!1.30e-11!625;UBERON:0000480!2.22e-11!626;UBERON:0000487!5.70e-10!22;UBERON:0000490!5.71e-10!138;UBERON:0002100!3.80e-09!216;UBERON:0004121!4.22e-09!169;UBERON:0005256!4.80e-09!143;UBERON:0000924!8.73e-09!173;UBERON:0006601!8.73e-09!173;UBERON:0000033!6.16e-08!123;UBERON:0006914!1.16e-07!25;UBERON:0000064!1.45e-07!219;UBERON:0003075!1.62e-07!86;UBERON:0007284!1.62e-07!86;UBERON:0000922!2.08e-07!612;UBERON:0000923!2.94e-07!604;UBERON:0005291!2.94e-07!604;UBERON:0006598!2.94e-07!604;UBERON:0002532!2.94e-07!604;UBERON:0002050!2.94e-07!605;UBERON:0005423!2.94e-07!605;UBERON:0002346!4.55e-07!90;UBERON:0003915!5.92e-07!9;UBERON:0004700!5.92e-07!9;UBERON:0001917!5.92e-07!9;UBERON:0000153!6.10e-07!129;UBERON:0007811!6.10e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.44e-17;18!UBERON:0001986;8.44e-17;18!UBERON:0004852;8.44e-17;18!UBERON:0000487;2.14e-13;22!UBERON:0000490;2.76e-11;33!UBERON:0002049;5.16e-11;75!UBERON:0007798;5.16e-11;75!UBERON:0006914;8.36e-11;25!UBERON:0000055;1.62e-09;65!UBERON:0003914;3.35e-09;74!UBERON:0007500;9.33e-09;56!UBERON:0001981;9.33e-09;56!UBERON:0004537;9.33e-09;56!UBERON:0003915;9.94e-09;9!UBERON:0004700;9.94e-09;9!UBERON:0001917;9.94e-09;9!UBERON:0001473;8.82e-08;8!UBERON:0004536;8.82e-08;8!UBERON:0006558;8.82e-08;8!UBERON:0000074;2.07e-07;7!UBERON:0001229;2.07e-07;7!UBERON:0010260;5.16e-07;9!UBERON:0001638;6.69e-07;9!UBERON:0003920;6.69e-07;9!UBERON:0004582;6.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.15e-23,78;UBERON:0007798,6.15e-23,78;UBERON:0000055,2.61e-18,68;UBERON:0004638,6.20e-17,18;UBERON:0001986,6.20e-17,18;UBERON:0004852,6.20e-17,18;UBERON:0004535,2.94e-14,109;UBERON:0007500,1.00e-13,59;UBERON:0001981,1.00e-13,59;UBERON:0004537,1.00e-13,59;UBERON:0006965,1.00e-13,59;UBERON:0000487,1.17e-13,22;UBERON:0001009,2.70e-13,112;UBERON:0003914,3.32e-12,117;UBERON:0000119,1.05e-11,309;UBERON:0004111,1.23e-11,240;UBERON:0004872,1.53e-11,83;UBERON:0000483,3.28e-11,306;UBERON:0006914,5.02e-11,25;UBERON:0000025,2.43e-10,192;UBERON:0003915,6.98e-09,9;UBERON:0004700,6.98e-09,9;UBERON:0001917,6.98e-09,9;UBERON:0000490,1.07e-08,148;UBERON:0001473,9.24e-08,8;UBERON:0004536,9.24e-08,8;UBERON:0006558,9.24e-08,8;UBERON:0010532,2.71e-07,7;UBERON:0000074,2.71e-07,7;UBERON:0001229,2.71e-07,7;UBERON:0001230,2.71e-07,7;UBERON:0003220,2.71e-07,7;UBERON:0005749,2.71e-07,7;UBERON:0004199,2.71e-07,7;UBERON:0004209,2.71e-07,7;UBERON:0004198,2.71e-07,7;UBERON:0007503,5.09e-07,78;UBERON:0001637,7.32e-07,42;UBERON:0003509,7.32e-07,42;UBERON:0004572,7.32e-07,42;UBERON:0010260,8.04e-07,9;UBERON:0001638,8.20e-07,9;UBERON:0003920,8.20e-07,9;UBERON:0004582,8.20e-07,9 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.422863212287913,0,0,0.872338524100369,5.06599756336621,0.631719873426831,0,1.72013755551056,3.48900583986214,0.436882744260345,1.05506791291381,0.37129905888014,0.331397375727916,0,0,0,0.975865597581014,2.58554221961255,5.71201935483908,4.38836610069323,0.572471974262113,1.91624195102038,1.88313959392204,0,0.0821005894499457,0,0,0,0,1.83884244895785,2.409647350226,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,0.361439152384566,0,0.869079113764942,0,0.973269740605272,1.60709189178915,1.99556457716308,4.12823492757692,1.63723844372141,0.364295288292542,1.48313777113772,0,0.522389211897802,0.398873881556595,0,0,0,4.17401055470081,1.72046919021225,16.6627440771645,4.52246353539208,9.64848703282784,12.380311887303,6.89683389571475,9.8198368484345,10.6729878806013,13.0541038978221,4.43112248820062,8.36299316290364,6.83373761134875,6.61793544622564,7.29127753093584,9.19787201326022,8.98117490504679,5.85579698513276,12.2653309972707,13.2897192339538,10.9921046358244,0,0,0.872188104285069,0.993943903390637,1.2663051166458,0.529636723252875,0,1.77334191099179,1.68203280042692,4.2699598291882,2.22000793575444,0,1.34710672069688,0.980771418680752,1.66493170409425,2.30470369792,0.70296429550139,0.936480230490962,1.1409436430889,0.149448680551801,0.23486899728753,0.323745888736263,0.842704840213491,1.02077085627447,1.59684612505298,0.206651562351531,4.75201142912821,3.95627086845691,3.64064544775211,3.59309070908119,0.673344455816265,0.375355559615893,1.38532057742091,3.95079858792754,2.14541457059314,2.85452311922534,0.794025282120147,2.87023417102179,1.06778694409284,1.69545520927649,1.80054657650641,1.33968288009971,2.31876486041066,0.930584281657949,1.35021065793013,1.46155507741798,2.27190396819703,1.01254888506529,0,2.4850671476163,2.92181084860157,3.05209066158878,0.773043412653187,0.818238361772504,1.72082757233402,0.365921118388786,0.265059536642971,0.69716365721711,0.310983165046111,0.504641701751257,0,6.25798129319264,3.21620469096443,2.76269842704961,2.3218396401599,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0.392442930250692,0,2.95262181849859,7.01208869017229,4.5273141246454,8.82052268313252,0,0.982827216677626,0,0,0,2.23038153388083,0.329250856225877,2.24803506515239,0.402115889646523,0.740707561268237,2.28065813717227,0,4.3299402607582,0.579652024875384,1.40890433082986,3.89789408954899,2.31492756288305,3.61482889245737,1.58040879591855,1.71697232418975,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0.871901815541886,1.91691339582606,7.8826118063351,0.528290604079356,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,5.13217338068116,0.616964956219941,0,0,3.1396703616701,0.87192013766656,2.42016343209135,1.16344544182,0,2.535908257668,2.6593811658487,6.24044621468197,6.17297698229141,1.41849132023278,6.12771011737029,1.57275793023962,0.542621605391443,1.64648067356154,1.30294473717494,1.06617584622764,0.791951872933429,1.20575750823834,0.871533458600294,2.29937879718731,0,0,0,2.39624855491583,3.44585807502342,1.42636905040718,0.289562613335158,1.43833425785268,0.179060963239896,0,0,0,0,1.27047312111232,2.60279707715243,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0.49076596687656,1.50051156317903,0.813795071099207,5.19927153827018,4.10386674233472,1.26161932027148,3.98280810975225,1.50473049863859,2.27407504055985,0,3.32112799267718,3.13427586520895,1.39013783148933,4.30762546418029,2.40200396667599,0,0,0,1.21251028578504,0,2.11673205330776,0.496215615637554,1.07423381301644,0.841980283299221,0.256278298511402,1.02341449813341,0.64341568457443,0,1.54209693802656,2.13074070375753,0.657017248110473,0.519254429183621,1.97557643381931,0.483437798366489,1.60405176242628,0.644566922551274,1.95184561879831,2.36718518408732,0.786746489756545,0.902399225814824,0.770153371044148,8.62784746094541,1.46139224653261,1.16106791782163,10.2360045663807,10.7159034324205,5.39789790255348,21.5918153766405,3.52230368807009,3.01013864312912,0.509752546090077,0.831076008928724,3.58199607555485,0,0,3.07740150139667,2.95213181129735,5.85681110395745,0.515205058238611,0.366277859273374,0.165018999841176,3.44559322797703,0.650060246036521,0,0.096670718292122,2.15668063960502,1.84204409671355,0.964856007391714,0.322260734604821,0.290033387828457,1.27839941124151,0.979352392114111,0.165284915360978,2.11409074101617,1.02090169995667,1.11273558941105,2.32422774648643,0.31481234683064,2.7881490806424,1.84820148105653,2.66153015158511,0.869932992075073,1.11194531462352,0.572499546967965,1.86079184679834,0.316379424718726,1.5250415513906,2.04718233049067,0,0.636406495851874,1.56989728039846,1.79872457583315,2.47083326762449,2.23843564456804,1.617459852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| |||
|short_description=p4@BCAR1 | |||
}} |
Latest revision as of 21:26, 17 September 2015
Short description: | p4@BCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCAR1_5end |
Coexpression cluster: | C2390_Renal_Endothelial_Alveolar_Hepatic_Mesenchymal_Sebocyte_mesothelioma |
Association with transcript: | -86bp_to_ENST00000393420, NM_001170717, NM_014567_5end |
EntrezGene: | BCAR1 |
HGNC: | 971 |
UniProt: | F8WA69P56945Q6QEF7B2RBL9B4DIW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.69e-25 | 121 |
endothelial cell | 5.00e-25 | 36 |
lining cell | 1.44e-23 | 58 |
barrier cell | 1.44e-23 | 58 |
endothelial cell of vascular tree | 1.05e-21 | 24 |
meso-epithelial cell | 2.62e-21 | 45 |
blood vessel endothelial cell | 6.20e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.20e-17 | 18 |
embryonic cell | 1.33e-15 | 250 |
endothelial cell of artery | 6.98e-09 | 9 |
squamous epithelial cell | 7.22e-09 | 63 |
glomerular cell | 2.71e-07 | 7 |
kidney corpuscule cell | 2.71e-07 | 7 |
vein endothelial cell | 4.18e-07 | 6 |