FFCP PHASE1:Hg19::chr1:36948050..36948062,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1441 | |EntrezGene=1441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2439 | |HGNC=2439 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK56 | |UniProt=E9PK56 | ||
|association_with_transcript=-398bp_to_ENST00000533491_5end | |association_with_transcript=-398bp_to_ENST00000533491_5end | ||
|cluster_id=chr1:36948050..36948062,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_15_at_CSF3R_5end | |description=CAGE_peak_15_at_CSF3R_5end | ||
|id=chr1:36948050..36948062,- | |id=chr1:36948050..36948062,- | ||
|ontology_enrichment_celltype=CL:0002057!1.30e-41!42;CL:0000766!8.49e-40!76;CL:0002194!1.98e-38!63;CL:0000576!1.98e-38!63;CL:0000040!1.98e-38!63;CL:0000559!1.98e-38!63;CL:0000860!4.57e-38!45;CL:0002009!7.64e-37!65;CL:0000839!2.81e-33!70;CL:0000557!1.26e-32!71;CL:0000763!5.77e-26!112;CL:0000049!5.77e-26!112;CL:0000738!2.30e-22!140;CL:0002087!1.80e-19!119;CL:0000037!8.32e-18!172;CL:0000566!8.32e-18!172;CL:0002031!4.23e-17!124;CL:0000988!8.65e-17!182;CL:0002032!2.96e-16!165;CL:0000837!2.96e-16!165;CL:0002393!7.56e-12!9;CL:0002397!7.56e-12!9;CL:0000775!3.52e-07!3;CL:0000784!4.97e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.30e-41!42;CL:0000766!8.49e-40!76;CL:0002194!1.98e-38!63;CL:0000576!1.98e-38!63;CL:0000040!1.98e-38!63;CL:0000559!1.98e-38!63;CL:0000860!4.57e-38!45;CL:0002009!7.64e-37!65;CL:0000839!2.81e-33!70;CL:0000557!1.26e-32!71;CL:0000763!5.77e-26!112;CL:0000049!5.77e-26!112;CL:0000738!2.30e-22!140;CL:0002087!1.80e-19!119;CL:0000037!8.32e-18!172;CL:0000566!8.32e-18!172;CL:0002031!4.23e-17!124;CL:0000988!8.65e-17!182;CL:0002032!2.96e-16!165;CL:0000837!2.96e-16!165;CL:0002393!7.56e-12!9;CL:0002397!7.56e-12!9;CL:0000775!3.52e-07!3;CL:0000784!4.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.58e-24;3!CL:0000784;2.96e-23;3!CL:0000094;7.20e-16;8!CL:0000081;1.39e-11;11!CL:0000576;1.22e-10;48!CL:0000860;2.05e-10;33!CL:0002057;2.05e-10;33!CL:0000766;7.38e-08;69!CL:0000473;1.08e-07;39!CL:0000234;1.08e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.60e-24,3;CL:0000784,1.82e-23,3;CL:0000766,4.23e-20,72;CL:0000094,7.22e-16,8;CL:0002194,7.26e-13,59;CL:0000576,7.26e-13,59;CL:0000040,7.26e-13,59;CL:0000559,7.26e-13,59;CL:0000860,9.53e-13,42;CL:0002057,9.53e-13,42;CL:0000763,1.56e-12,108;CL:0000049,1.56e-12,108;CL:0000738,1.64e-12,136;CL:0002009,2.17e-12,61;CL:0000081,1.39e-11,11;CL:0000839,2.51e-11,66;CL:0000557,3.93e-11,67;CL:0000473,5.50e-11,48;CL:0000234,5.50e-11,48;CL:0000037,1.56e-09,168;CL:0000988,6.88e-09,177;CL:0002032,1.62e-07,161;CL:0000837,1.62e-07,161;CL:0000451,9.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-39!102;UBERON:0003061!1.11e-39!102;UBERON:0002193!1.09e-37!112;UBERON:0002371!1.70e-27!80;UBERON:0001474!1.11e-24!86;UBERON:0007023!3.80e-23!115;UBERON:0002405!1.12e-22!115;UBERON:0004765!2.92e-20!101;UBERON:0001434!2.92e-20!101;UBERON:0003081!1.22e-13!216;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15;UBERON:0002204!7.11e-09!167;UBERON:0001049!7.29e-07!57;UBERON:0005068!7.29e-07!57;UBERON:0006241!7.29e-07!57;UBERON:0007135!7.29e-07!57 | |ontology_enrichment_uberon=UBERON:0002390!1.11e-39!102;UBERON:0003061!1.11e-39!102;UBERON:0002193!1.09e-37!112;UBERON:0002371!1.70e-27!80;UBERON:0001474!1.11e-24!86;UBERON:0007023!3.80e-23!115;UBERON:0002405!1.12e-22!115;UBERON:0004765!2.92e-20!101;UBERON:0001434!2.92e-20!101;UBERON:0003081!1.22e-13!216;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15;UBERON:0002204!7.11e-09!167;UBERON:0001049!7.29e-07!57;UBERON:0005068!7.29e-07!57;UBERON:0006241!7.29e-07!57;UBERON:0007135!7.29e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-30;15!UBERON:0000179;2.22e-30;15!UBERON:0000463;2.22e-30;15!UBERON:0002390;5.66e-13;32!UBERON:0002171;1.17e-08;1!UBERON:0006518;1.17e-08;1!UBERON:0008949;1.17e-08;1!UBERON:0000101;1.17e-08;1!UBERON:0002167;1.17e-08;1!UBERON:0002193;1.65e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-30,15;UBERON:0000179,1.91e-30,15;UBERON:0000463,1.91e-30,15;UBERON:0002390,2.98e-23,98;UBERON:0003061,2.98e-23,98;UBERON:0002193,8.47e-21,108;UBERON:0002371,1.30e-09,76;UBERON:0003081,1.83e-09,203;UBERON:0001474,8.74e-09,82;UBERON:0002171,1.22e-08,1;UBERON:0006518,1.22e-08,1;UBERON:0008949,1.22e-08,1;UBERON:0000101,1.22e-08,1;UBERON:0002167,1.22e-08,1;UBERON:0004765,7.52e-08,90;UBERON:0002405,1.53e-07,93;UBERON:0001434,6.83e-07,100 | |||
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| ||
|short_description=p15@CSF3R | |short_description=p15@CSF3R | ||
}} | }} |
Latest revision as of 21:28, 17 September 2015
Short description: | p15@CSF3R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CSF3R_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -398bp_to_ENST00000533491_5end |
EntrezGene: | CSF3R |
HGNC: | 2439 |
UniProt: | E9PK56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.60e-24 | 3 |
plasmacytoid dendritic cell | 1.82e-23 | 3 |
myeloid leukocyte | 4.23e-20 | 72 |
granulocyte | 7.22e-16 | 8 |
monopoietic cell | 7.26e-13 | 59 |
monocyte | 7.26e-13 | 59 |
monoblast | 7.26e-13 | 59 |
promonocyte | 7.26e-13 | 59 |
classical monocyte | 9.53e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-13 | 42 |
myeloid cell | 1.56e-12 | 108 |
common myeloid progenitor | 1.56e-12 | 108 |
leukocyte | 1.64e-12 | 136 |
macrophage dendritic cell progenitor | 2.17e-12 | 61 |
blood cell | 1.39e-11 | 11 |
myeloid lineage restricted progenitor cell | 2.51e-11 | 66 |
granulocyte monocyte progenitor cell | 3.93e-11 | 67 |
defensive cell | 5.50e-11 | 48 |
phagocyte | 5.50e-11 | 48 |
hematopoietic stem cell | 1.56e-09 | 168 |
hematopoietic cell | 6.88e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.62e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-07 | 161 |
dendritic cell | 9.15e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 1.91e-30 | 15 |
haemolymphatic fluid | 1.91e-30 | 15 |
organism substance | 1.91e-30 | 15 |
hematopoietic system | 2.98e-23 | 98 |
blood island | 2.98e-23 | 98 |
hemolymphoid system | 8.47e-21 | 108 |
bone marrow | 1.30e-09 | 76 |
lateral plate mesoderm | 1.83e-09 | 203 |
bone element | 8.74e-09 | 82 |
lower lobe of right lung | 1.22e-08 | 1 |
right lung lobe | 1.22e-08 | 1 |
lower lobe of lung | 1.22e-08 | 1 |
lobe of lung | 1.22e-08 | 1 |
right lung | 1.22e-08 | 1 |
skeletal element | 7.52e-08 | 90 |
immune system | 1.53e-07 | 93 |
skeletal system | 6.83e-07 | 100 |