FFCP PHASE1:Hg19::chr15:48623600..48623667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1854 | |EntrezGene=1854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3078 | |HGNC=3078 | ||
|TSSclassifier=strong | |||
|UniProt=P33316 | |UniProt=P33316 | ||
|association_with_transcript=0bp_to_ENST00000249783,ENST00000331200,ENST00000558472,ENST00000558813,NM_001025248,NM_001025249,uc001zws.2,uc001zwt.2,uc001zwu.2_5end | |association_with_transcript=0bp_to_ENST00000249783,ENST00000331200,ENST00000558472,ENST00000558813,NM_001025248,NM_001025249,uc001zws.2,uc001zwt.2,uc001zwu.2_5end | ||
|cluster_id=chr15:48623600..48623667,+ | |||
|description=CAGE_peak_2_at_DUT_5end | |description=CAGE_peak_2_at_DUT_5end | ||
|id=chr15:48623600..48623667,+ | |id=chr15:48623600..48623667,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.13e-09!57;UBERON:0005068!5.13e-09!57;UBERON:0006241!5.13e-09!57;UBERON:0007135!5.13e-09!57;UBERON:0003075!2.93e-08!86;UBERON:0007284!2.93e-08!86;UBERON:0000955!4.27e-08!69;UBERON:0006238!4.27e-08!69;UBERON:0002346!1.36e-07!90;UBERON:0003080!1.42e-07!42;UBERON:0000153!2.11e-07!129;UBERON:0007811!2.11e-07!129;UBERON:0002616!2.54e-07!59;UBERON:0002780!2.77e-07!41;UBERON:0001890!2.77e-07!41;UBERON:0006240!2.77e-07!41;UBERON:0000033!5.46e-07!123;UBERON:0005743!7.82e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!5.13e-09!57;UBERON:0005068!5.13e-09!57;UBERON:0006241!5.13e-09!57;UBERON:0007135!5.13e-09!57;UBERON:0003075!2.93e-08!86;UBERON:0007284!2.93e-08!86;UBERON:0000955!4.27e-08!69;UBERON:0006238!4.27e-08!69;UBERON:0002346!1.36e-07!90;UBERON:0003080!1.42e-07!42;UBERON:0000153!2.11e-07!129;UBERON:0007811!2.11e-07!129;UBERON:0002616!2.54e-07!59;UBERON:0002780!2.77e-07!41;UBERON:0001890!2.77e-07!41;UBERON:0006240!2.77e-07!41;UBERON:0000033!5.46e-07!123;UBERON:0005743!7.82e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,6.47e-09,82;UBERON:0007284,6.47e-09,82;UBERON:0001049,9.95e-09,56;UBERON:0005068,9.95e-09,56;UBERON:0006241,9.95e-09,56;UBERON:0007135,9.95e-09,56;UBERON:0010314,2.80e-08,132;UBERON:0002346,3.51e-08,86;UBERON:0000955,7.83e-08,68;UBERON:0006238,7.83e-08,68;UBERON:0000073,7.93e-08,53;UBERON:0002616,7.93e-08,53;UBERON:0010371,1.08e-07,104;UBERON:0002780,2.77e-07,41;UBERON:0001890,2.77e-07,41;UBERON:0003080,2.77e-07,41;UBERON:0006240,2.77e-07,41 | |||
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| ||
|short_description=p2@DUT | |short_description=p2@DUT | ||
}} | }} |
Latest revision as of 21:49, 17 September 2015
Short description: | p2@DUT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DUT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000249783, ENST00000331200, ENST00000558472, ENST00000558813, NM_001025248, NM_001025249, uc001zws.2, uc001zwt.2, uc001zwu.2_5end |
EntrezGene: | DUT |
HGNC: | 3078 |
UniProt: | P33316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 6.47e-09 | 82 |
presumptive neural plate | 6.47e-09 | 82 |
neural tube | 9.95e-09 | 56 |
neural rod | 9.95e-09 | 56 |
future spinal cord | 9.95e-09 | 56 |
neural keel | 9.95e-09 | 56 |
structure with developmental contribution from neural crest | 2.80e-08 | 132 |
neurectoderm | 3.51e-08 | 86 |
brain | 7.83e-08 | 68 |
future brain | 7.83e-08 | 68 |
regional part of nervous system | 7.93e-08 | 53 |
regional part of brain | 7.93e-08 | 53 |
ecto-epithelium | 1.08e-07 | 104 |
regional part of forebrain | 2.77e-07 | 41 |
forebrain | 2.77e-07 | 41 |
anterior neural tube | 2.77e-07 | 41 |
future forebrain | 2.77e-07 | 41 |