FFCP PHASE1:Hg19::chr5:40681025..40681036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5734 | |EntrezGene=5734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9596 | |HGNC=9596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_HQ258444_5end | |||
|cluster_id=chr5:40681025..40681036,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_PTGER4_5end | |||
|id=chr5:40681025..40681036,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.29e-27!140;CL:0000084!1.21e-25!25;CL:0000827!1.21e-25!25;CL:0000838!1.34e-25!52;CL:0000791!2.81e-25!18;CL:0000789!2.81e-25!18;CL:0002420!2.81e-25!18;CL:0002419!2.81e-25!18;CL:0000790!2.81e-25!18;CL:0000542!6.31e-25!53;CL:0000051!6.31e-25!53;CL:0002087!1.91e-24!119;CL:0002031!2.14e-23!124;CL:0000037!3.73e-22!172;CL:0000566!3.73e-22!172;CL:0000988!8.46e-22!182;CL:0002032!2.00e-20!165;CL:0000837!2.00e-20!165;CL:0000625!2.50e-16!11;CL:0000624!1.64e-12!6;CL:0002393!1.11e-08!9;CL:0002397!1.11e-08!9;CL:0000080!1.87e-07!6;CL:0000623!5.36e-07!3;CL:0000825!5.36e-07!3;CL:0000898!6.60e-07!3;CL:0000766!6.69e-07!76;CL:0000842!9.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.54e-42;18!CL:0000789;1.54e-42;18!CL:0002419;1.54e-42;18!CL:0000084;7.93e-30;25!CL:0000624;1.93e-29;6!CL:0000625;3.74e-20;11!CL:0000542;1.74e-15;53!CL:0000623;2.48e-15;3!CL:0000898;3.83e-15;3!CL:0000226;8.79e-15;3!CL:0000842;8.79e-15;3!CL:0000767;1.91e-14;3!CL:0000815;9.89e-11;2!CL:0000792;9.89e-11;2!CL:0002677;9.89e-11;2!CL:0002087;1.47e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.19e-43,18;CL:0000789,8.19e-43,18;CL:0002420,8.19e-43,18;CL:0002419,8.19e-43,18;CL:0000790,8.19e-43,18;CL:0000084,5.09e-30,25;CL:0000827,5.09e-30,25;CL:0000624,1.89e-29,6;CL:0000838,6.91e-26,52;CL:0000542,2.56e-25,53;CL:0000051,2.56e-25,53;CL:0000625,2.21e-20,11;CL:0000738,1.75e-17,136;CL:0002087,1.99e-16,115;CL:0000623,2.10e-15,3;CL:0000825,2.10e-15,3;CL:0000898,3.57e-15,3;CL:0000226,9.23e-15,3;CL:0000842,9.23e-15,3;CL:0000767,2.35e-14,3;CL:0000037,4.69e-13,168;CL:0000988,4.23e-12,177;CL:0002031,3.45e-11,120;CL:0000815,1.01e-10,2;CL:0000792,1.01e-10,2;CL:0002677,1.01e-10,2;CL:0002032,3.13e-10,161;CL:0000837,3.13e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.54e-42;18!CL:0000051;1.74e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.63e-12!15;UBERON:0000179!1.63e-12!15;UBERON:0000463!1.63e-12!15;UBERON:0002390!4.10e-11!102;UBERON:0003061!4.10e-11!102;UBERON:0002193!5.87e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-10;15!UBERON:0000179;1.17e-10;15!UBERON:0000463;1.17e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.11e-10,15;UBERON:0000179,1.11e-10,15;UBERON:0000463,1.11e-10,15 | |||
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| ||
|short_description=p7@PTGER4 | |||
}} | }} |
Latest revision as of 22:06, 17 September 2015
Short description: | p7@PTGER4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTGER4_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -58bp_to_HQ258444_5end |
EntrezGene: | PTGER4 |
HGNC: | 9596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.19e-43 | 18 |
alpha-beta T cell | 8.19e-43 | 18 |
immature T cell | 8.19e-43 | 18 |
mature T cell | 8.19e-43 | 18 |
immature alpha-beta T cell | 8.19e-43 | 18 |
T cell | 5.09e-30 | 25 |
pro-T cell | 5.09e-30 | 25 |
CD4-positive, alpha-beta T cell | 1.89e-29 | 6 |
lymphoid lineage restricted progenitor cell | 6.91e-26 | 52 |
lymphocyte | 2.56e-25 | 53 |
common lymphoid progenitor | 2.56e-25 | 53 |
CD8-positive, alpha-beta T cell | 2.21e-20 | 11 |
leukocyte | 1.75e-17 | 136 |
nongranular leukocyte | 1.99e-16 | 115 |
natural killer cell | 2.10e-15 | 3 |
pro-NK cell | 2.10e-15 | 3 |
naive T cell | 3.57e-15 | 3 |
single nucleate cell | 9.23e-15 | 3 |
mononuclear cell | 9.23e-15 | 3 |
basophil | 2.35e-14 | 3 |
hematopoietic stem cell | 4.69e-13 | 168 |
hematopoietic cell | 4.23e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 3.45e-11 | 120 |
regulatory T cell | 1.01e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.01e-10 | 2 |
naive regulatory T cell | 1.01e-10 | 2 |
hematopoietic oligopotent progenitor cell | 3.13e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.13e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.11e-10 | 15 |
haemolymphatic fluid | 1.11e-10 | 15 |
organism substance | 1.11e-10 | 15 |