FFCP PHASE1:Hg19::chr11:392587..392618,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:392587..392618,+ to FFCP PHASE1:Hg19::chr11:392587..392618,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11187 | |EntrezGene=11187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9025 | |HGNC=9025 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ15 | |UniProt=E9PQ15 | ||
|association_with_transcript=0bp_to_ENST00000534401_5end | |||
|cluster_id=chr11:392587..392618,+ | |||
|coexpression_cluster_id=C2129 | |||
|description=CAGE_peak_2_at_PKP3_5end | |||
|id=chr11:392587..392618,+ | |||
|ontology_enrichment_celltype=CL:0002159!7.26e-15!13;CL:0002076!4.91e-12!43;CL:0000223!2.60e-11!59;CL:0002251!4.28e-09!21;CL:0000066!5.70e-09!254;CL:0002077!1.32e-08!33;CL:0000349!1.33e-07!3;CL:0002577!1.33e-07!3;CL:0002621!2.93e-07!3;CL:0002166!4.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.36e-22;14!CL:0002251;1.73e-13;20!CL:0000349;6.87e-13;19!CL:0002577;2.38e-11;3!CL:0002621;8.73e-11;3!CL:0002166;1.88e-10;3!CL:0002077;8.11e-10;34!CL:0002076;1.65e-09;42!CL:0000240;3.92e-09;6!CL:0000311;3.92e-09;6!CL:0000079;3.92e-09;6!CL:0000237;3.92e-09;6!CL:0000362;4.35e-09;9!CL:0000575;5.29e-08;2!CL:0002327;5.38e-08;4!CL:0002536;1.09e-07;2!CL:0000317;1.56e-07;2!CL:1000448;1.56e-07;2!CL:0002308;1.56e-07;2!CL:0002140;1.56e-07;2!CL:0001014;5.08e-07;2!CL:0001016;5.08e-07;2!CL:0002537;9.63e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.42e-22,14;CL:0002251,1.63e-13,20;CL:0000349,6.68e-13,19;CL:0000066,1.46e-11,253;CL:0002577,2.38e-11,3;CL:0002077,3.02e-11,34;CL:0002076,7.28e-11,42;CL:0002621,8.59e-11,3;CL:0002166,1.91e-10,3;CL:0000223,2.12e-09,58;CL:0000240,4.00e-09,6;CL:0000311,4.00e-09,6;CL:0000079,4.00e-09,6;CL:0000237,4.00e-09,6;CL:0000036,4.00e-09,6;CL:0000357,4.00e-09,6;CL:0000114,4.00e-09,6;CL:0000362,4.36e-09,9;CL:0000076,4.89e-09,63;CL:0000575,5.29e-08,2;CL:0002327,5.38e-08,4;CL:0002536,1.09e-07,2;CL:0000317,1.51e-07,2;CL:1000448,1.51e-07,2;CL:0002308,1.51e-07,2;CL:0002140,1.51e-07,2;CL:0001014,5.00e-07,2;CL:0001016,5.00e-07,2;CL:0002537,9.54e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;3.92e-09;6!CL:0000114;3.92e-09;6!UBERON:0008814;1.64e-07;2!UBERON:0010056;1.64e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!1.24e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.11e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.11e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.60e-19!14;UBERON:0000158!3.60e-19!14;UBERON:0003124!1.56e-13!7;UBERON:0000478!1.36e-11!24;UBERON:0000166!4.70e-11!21;UBERON:0004923!1.40e-10!57;UBERON:0003729!4.96e-10!5;UBERON:0000161!5.18e-10!35;UBERON:0001987!4.21e-09!4;UBERON:0004340!4.21e-09!4;UBERON:0000165!5.04e-09!28;UBERON:0000930!5.04e-09!28;UBERON:0000974!2.67e-08!10;UBERON:0003102!2.80e-08!95;UBERON:0003343!2.92e-08!4;UBERON:0004785!2.92e-08!4;UBERON:0000305!9.65e-08!7;UBERON:0001949!2.93e-07!3;UBERON:0005795!4.49e-07!22;UBERON:0004119!4.64e-07!169;UBERON:0000925!4.64e-07!169;UBERON:0006595!4.64e-07!169;UBERON:0001723!5.87e-07!3;UBERON:0001033!5.87e-07!3;UBERON:0010056!5.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;2.15e-14;13!UBERON:0000478;2.17e-14;24!UBERON:0001987;8.80e-14;4!UBERON:0000974;1.70e-12;6!UBERON:0003343;2.17e-12;4!UBERON:0004785;2.17e-12;4!UBERON:0000305;4.94e-12;7!UBERON:0005631;1.58e-11;10!UBERON:0000158;1.58e-11;10!UBERON:0000165;2.09e-11;28!UBERON:0000344;3.61e-11;20!UBERON:0001949;8.73e-11;3!UBERON:0001723;2.63e-10;3!UBERON:0001033;2.63e-10;3!UBERON:0000161;2.45e-09;19!UBERON:0000166;2.45e-09;19!UBERON:0001911;5.38e-08;4!UBERON:0004923;5.88e-08;55!UBERON:0001708;6.27e-08;4!UBERON:0008895;6.27e-08;4!UBERON:0002419;1.56e-07;2!UBERON:0007771;1.56e-07;2!UBERON:0003297;1.56e-07;2!UBERON:0001821;1.56e-07;2!UBERON:0003487;1.56e-07;2!UBERON:0001820;1.56e-07;2!UBERON:0001003;2.95e-07;15!UBERON:0007376;2.95e-07;15!UBERON:0010371;6.32e-07;31!UBERON:0006562;8.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.54e-22,14;UBERON:0000158,4.54e-22,14;UBERON:0003729,2.07e-14,13;UBERON:0000478,2.17e-14,24;UBERON:0004923,2.33e-14,66;UBERON:0001987,9.09e-14,4;UBERON:0004340,9.09e-14,4;UBERON:0003102,1.51e-13,99;UBERON:0000166,1.77e-12,22;UBERON:0003343,2.07e-12,4;UBERON:0004785,2.07e-12,4;UBERON:0000305,4.89e-12,7;UBERON:0003124,1.10e-11,7;UBERON:0000344,3.52e-11,20;UBERON:0000165,6.07e-11,29;UBERON:0000930,6.07e-11,29;UBERON:0001949,8.59e-11,3;UBERON:0000033,8.81e-11,56;UBERON:0000153,1.03e-10,62;UBERON:0007811,1.03e-10,62;UBERON:0004871,1.77e-10,8;UBERON:0001723,2.63e-10,3;UBERON:0001033,2.63e-10,3;UBERON:0010056,2.63e-10,3;UBERON:0000161,6.83e-10,36;UBERON:0001444,3.99e-08,49;UBERON:0005795,4.34e-08,22;UBERON:0001911,5.38e-08,4;UBERON:0005333,5.38e-08,4;UBERON:0008425,5.38e-08,4;UBERON:0005311,5.38e-08,4;UBERON:0001708,6.34e-08,4;UBERON:0008895,6.34e-08,4;UBERON:0002419,1.51e-07,2;UBERON:0007771,1.51e-07,2;UBERON:0003297,1.51e-07,2;UBERON:0001821,1.51e-07,2;UBERON:0003487,1.51e-07,2;UBERON:0001820,1.51e-07,2;UBERON:0005089,1.51e-07,2;UBERON:0005088,1.51e-07,2;UBERON:0000974,2.17e-07,10;UBERON:0003100,2.95e-07,41;UBERON:0001003,2.98e-07,15;UBERON:0007376,2.98e-07,15;UBERON:0007383,2.98e-07,15;UBERON:0006562,8.25e-07,11;UBERON:0004121,9.87e-07,171;UBERON:0000924,9.87e-07,171;UBERON:0006601,9.87e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,28.6158197490526,24.5303289752462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,2.75826367343678,1.8072355126695,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0,0,0,0,47.3583874780305,53.0221753181734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,34.9802144225567,24.5471508531751,26.9596319665664,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6433947021732,31.4724909121335,19.8042075650913,14.3512089995721,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7441802352397,13.2705881277099,12.7597587518148,10.3887886335304,22.3788132655751,36.4213545206951,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0.737476674166813,0,0,0,0,0,0,146.107489437097,73.2315933846187,130.330216425092,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,7.01772646061497,3.31491560169227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,13.7823729119081,27.9525905795704,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.282431402330337,0,0,6.65145230305014,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5142719853751,78.3986757398166,30.1017488057247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,19.9375954318403,7.15637404085313,0,0,0,0.217294743844016,9.8890359516895,0.915975934018623,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,2.34797542718508,3.15614493394321,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,22.048289418235,7.13885493959301,0.34945333648406,0,0,0,0,28.5147708475953,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,6.59943296927027,0,0,0,0,0,0,0,0,0,0,0,0,9.18523402295359,0,0.446342914883745,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,1.5748172408605,23.2140586367385,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.57511886655273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9254204340528,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72961330303897,4.83675865725735,13.7571448891259,9.47310462432773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96968942711435,0,1.53314913167514,0,0,0,0,2.04015451374069,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0,0,0,7.67642334843531,0.714193294391221,0.0645889098360061,0,0,0,0,32.6575121845442,10.6092323336437,8.21695046777968,3.51438806424114,0.99798106963804,0,0,0,0,7.03922827210363,0.977931553462932,12.6137815277879,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,28.6158197490526,24.5303289752462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,2.75826367343678,1.8072355126695,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0,0,0,0,47.3583874780305,53.0221753181734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,34.9802144225567,24.5471508531751,26.9596319665664,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6433947021732,31.4724909121335,19.8042075650913,14.3512089995721,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7441802352397,13.2705881277099,12.7597587518148,10.3887886335304,22.3788132655751,36.4213545206951,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0.737476674166813,0,0,0,0,0,0,146.107489437097,73.2315933846187,130.330216425092,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,7.01772646061497,3.31491560169227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,13.7823729119081,27.9525905795704,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.282431402330337,0,0,6.65145230305014,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5142719853751,78.3986757398166,30.1017488057247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,19.9375954318403,7.15637404085313,0,0,0,0.217294743844016,9.8890359516895,0.915975934018623,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,2.34797542718508,3.15614493394321,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,22.048289418235,7.13885493959301,0.34945333648406,0,0,0,0,28.5147708475953,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,6.59943296927027,0,0,0,0,0,0,0,0,0,0,0,0,9.18523402295359,0,0.446342914883745,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,1.5748172408605,23.2140586367385,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.57511886655273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9254204340528,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72961330303897,4.83675865725735,13.7571448891259,9.47310462432773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96968942711435,0,1.53314913167514,0,0,0,0,2.04015451374069,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0,0,0,7.67642334843531,0.714193294391221,0.0645889098360061,0,0,0,0,32.6575121845442,10.6092323336437,8.21695046777968,3.51438806424114,0.99798106963804,0,0,0,0,7.03922827210363,0.977931553462932,12.6137815277879,0,0,0 | ||
|short_description=p2@PKP3 | |||
}} | }} |
Latest revision as of 22:41, 17 September 2015
Short description: | p2@PKP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKP3_5end |
Coexpression cluster: | C2129_Placental_amniotic_Keratinocyte_Corneal_Gingival_Mammary_tongue |
Association with transcript: | 0bp_to_ENST00000534401_5end |
EntrezGene: | PKP3 |
HGNC: | 9025 |
UniProt: | E9PQ15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.11e-12 | 14 |