FFCP PHASE1:Hg19::chr6:31619827..31619857,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31619827..31619857,+
|short_description=p2@APOM
|description=CAGE_peak_2_at_APOM_5end
|association_with_transcript=-335bp_to_ENST00000375918_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55937 | |EntrezGene=55937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13916 | |HGNC=13916 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SRP5 | |UniProt=Q5SRP5 | ||
|association_with_transcript=-335bp_to_ENST00000375918_5end | |||
|cluster_id=chr6:31619827..31619857,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_APOM_5end | |||
|id=chr6:31619827..31619857,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.21e-27!42;CL:0000860!5.33e-24!45;CL:0000766!7.20e-23!76;CL:0000763!7.19e-22!112;CL:0000049!7.19e-22!112;CL:0000557!1.34e-19!71;CL:0000037!2.80e-18!172;CL:0000566!2.80e-18!172;CL:0000988!4.15e-18!182;CL:0002009!3.02e-17!65;CL:0000738!4.84e-17!140;CL:0000839!6.96e-17!70;CL:0002032!2.03e-16!165;CL:0000837!2.03e-16!165;CL:0002194!3.31e-16!63;CL:0000576!3.31e-16!63;CL:0000040!3.31e-16!63;CL:0000559!3.31e-16!63;CL:0000003!4.65e-12!722;CL:0002031!1.08e-11!124;CL:0002087!4.27e-11!119;CL:0000012!2.17e-07!682;CL:0000063!5.32e-07!578;CL:0000081!7.14e-07!11;CL:0000094!8.00e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.18e-29;33!CL:0002057;4.18e-29;33!CL:0000576;4.53e-23;48!CL:0000473;4.71e-21;39!CL:0000234;4.71e-21;39!CL:0000766;3.51e-18;69!CL:0000763;2.44e-10;100!CL:0000094;1.79e-09;8!CL:0000081;2.72e-09;11!CL:0002087;4.61e-09;104!CL:0002393;7.36e-07;6!CL:0002397;7.36e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-39,42;CL:0002057,1.04e-39,42;CL:0000766,8.70e-37,72;CL:0000473,6.97e-35,48;CL:0000234,6.97e-35,48;CL:0000557,1.16e-31,67;CL:0000763,2.47e-31,108;CL:0000049,2.47e-31,108;CL:0002009,7.21e-29,61;CL:0000839,1.02e-27,66;CL:0000738,1.43e-27,136;CL:0000037,1.48e-27,168;CL:0002194,3.20e-27,59;CL:0000576,3.20e-27,59;CL:0000040,3.20e-27,59;CL:0000559,3.20e-27,59;CL:0000988,1.19e-26,177;CL:0002032,8.15e-25,161;CL:0000837,8.15e-25,161;CL:0002031,1.57e-20,120;CL:0002087,2.11e-19,115;CL:0000134,9.78e-10,354;CL:0000094,1.91e-09,8;CL:0002320,2.04e-09,361;CL:0002393,2.90e-09,9;CL:0002397,2.90e-09,9;CL:0000081,3.24e-09,11;CL:0000219,6.17e-09,386;CL:0000034,1.21e-08,441;CL:0000048,3.12e-08,427;CL:0000723,5.85e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.50e-29;42!CL:0000049;7.13e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.31e-18!80;UBERON:0002390!1.90e-17!102;UBERON:0003061!1.90e-17!102;UBERON:0001474!6.25e-17!86;UBERON:0002193!7.44e-16!112;UBERON:0004765!2.54e-14!101;UBERON:0001434!2.54e-14!101;UBERON:0002405!8.15e-12!115;UBERON:0003081!1.87e-08!216;UBERON:0002204!1.88e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.74e-29,76;UBERON:0002390,1.79e-28,98;UBERON:0003061,1.79e-28,98;UBERON:0001474,2.78e-27,82;UBERON:0002193,3.31e-26,108;UBERON:0004765,2.56e-24,90;UBERON:0002405,3.62e-23,93;UBERON:0001434,5.60e-21,100;UBERON:0003081,1.39e-13,203;UBERON:0002204,2.94e-11,167;UBERON:0002384,3.00e-08,371 | |||
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| ||
|short_description=p2@APOM | |||
}} | }} |
Latest revision as of 22:47, 17 September 2015
Short description: | p2@APOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOM_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -335bp_to_ENST00000375918_5end |
EntrezGene: | APOM |
HGNC: | 13916 |
UniProt: | Q5SRP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.74e-29 | 76 |
hematopoietic system | 1.79e-28 | 98 |
blood island | 1.79e-28 | 98 |
bone element | 2.78e-27 | 82 |
hemolymphoid system | 3.31e-26 | 108 |
skeletal element | 2.56e-24 | 90 |
immune system | 3.62e-23 | 93 |
skeletal system | 5.60e-21 | 100 |
lateral plate mesoderm | 1.39e-13 | 203 |
musculoskeletal system | 2.94e-11 | 167 |
connective tissue | 3.00e-08 | 371 |