FFCP PHASE1:Hg19::chr13:76335013..76335032,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:76335013..76335032,+
|short_description=p14@LMO7
|description=CAGE_peak_14_at_LMO7_5end
|association_with_transcript=216bp_to_ENST00000465261,NM_015842,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLH4,Q8WWI1 | |UniProt=E9PLH4,Q8WWI1 | ||
|association_with_transcript=216bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | |||
|cluster_id=chr13:76335013..76335032,+ | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_14_at_LMO7_5end | |||
|id=chr13:76335013..76335032,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.28e-11;12!CL:0002178;2.59e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.60e-11,12;CL:0000223,1.89e-09,58;CL:0002178,2.64e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.00e-12;11!UBERON:0010122;2.04e-11;2!UBERON:0009497;1.78e-10;13!UBERON:0003104;8.40e-08;31!UBERON:0001045;9.78e-07;1 | |||
|ontology_enrichment_disease=DOID:305!9.24e-14!106;DOID:0050687!5.90e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.17e-12;2!DOID:299;2.09e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.17e-12,2;DOID:299,2.12e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-18!115;UBERON:0002780!7.86e-16!41;UBERON:0001890!7.86e-16!41;UBERON:0006240!7.86e-16!41;UBERON:0001869!2.94e-15!32;UBERON:0003080!3.12e-15!42;UBERON:0004921!4.38e-15!129;UBERON:0004185!4.38e-15!129;UBERON:0001893!5.74e-15!34;UBERON:0002791!3.24e-14!33;UBERON:0001007!1.61e-13!155;UBERON:0001555!1.61e-13!155;UBERON:0007026!1.61e-13!155;UBERON:0005911!7.02e-13!82;UBERON:0004119!1.33e-12!169;UBERON:0000925!1.33e-12!169;UBERON:0006595!1.33e-12!169;UBERON:0002020!1.42e-12!34;UBERON:0003528!1.42e-12!34;UBERON:0002619!1.63e-11!22;UBERON:0001950!3.98e-10!20;UBERON:0003929!4.45e-10!54;UBERON:0000077!5.54e-10!130;UBERON:0000481!8.34e-10!347;UBERON:0001049!1.45e-09!57;UBERON:0005068!1.45e-09!57;UBERON:0006241!1.45e-09!57;UBERON:0007135!1.45e-09!57;UBERON:0000956!1.50e-09!25;UBERON:0000203!1.50e-09!25;UBERON:0002616!5.94e-09!59;UBERON:0000955!7.67e-09!69;UBERON:0006238!7.67e-09!69;UBERON:0003056!2.17e-08!61;UBERON:0000477!2.75e-07!286;UBERON:0005409!2.75e-07!35;UBERON:0001017!4.54e-07!82;UBERON:0001041!5.11e-07!98;UBERON:0005743!8.86e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.11e-38;22!UBERON:0000160;1.15e-29;17!UBERON:0004921;4.31e-22;33!UBERON:0000059;7.89e-18;11!UBERON:0005383;2.97e-16;3!UBERON:0005382;2.97e-16;3!UBERON:0001155;2.71e-15;9!UBERON:0000369;2.49e-12;4!UBERON:0002435;2.49e-12;4!UBERON:0000204;2.49e-12;4!UBERON:0009663;3.91e-12;7!UBERON:0001873;2.04e-11;2!UBERON:0002108;5.29e-11;4!UBERON:0004907;1.21e-10;5!UBERON:0000945;1.42e-10;5!UBERON:0010039;1.42e-10;5!UBERON:0002420;1.80e-09;9!UBERON:0000125;1.80e-09;9!UBERON:0007245;1.80e-09;9!UBERON:0002308;1.80e-09;9!UBERON:0010009;1.80e-09;9!UBERON:0010011;1.80e-09;9!UBERON:0000454;1.80e-09;9!UBERON:0001007;1.70e-08;81!UBERON:0001555;6.93e-08;54!UBERON:0002423;2.38e-07;25!UBERON:0002107;4.41e-07;19!UBERON:0006925;4.41e-07;19!UBERON:0001154;9.78e-07;1!UBERON:0001153;9.78e-07;1!UBERON:0009854;9.78e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.77e-34,25;UBERON:0000160,9.71e-30,17;UBERON:0000059,6.52e-18,11;UBERON:0005383,1.99e-16,3;UBERON:0005382,1.99e-16,3;UBERON:0004921,4.79e-16,118;UBERON:0001155,2.30e-15,9;UBERON:0001007,1.26e-13,145;UBERON:0001555,1.26e-13,145;UBERON:0007026,1.26e-13,145;UBERON:0000369,1.85e-12,4;UBERON:0002435,1.85e-12,4;UBERON:0000204,1.85e-12,4;UBERON:0010082,1.85e-12,4;UBERON:0009663,3.47e-12,7;UBERON:0011216,4.80e-12,223;UBERON:0004119,6.52e-12,160;UBERON:0000925,6.52e-12,160;UBERON:0006595,6.52e-12,160;UBERON:0001873,1.56e-11,2;UBERON:0010122,1.56e-11,2;UBERON:0002108,5.48e-11,4;UBERON:0004907,1.21e-10,5;UBERON:0002420,1.65e-09,9;UBERON:0000125,1.65e-09,9;UBERON:0007245,1.65e-09,9;UBERON:0002308,1.65e-09,9;UBERON:0010009,1.65e-09,9;UBERON:0010011,1.65e-09,9;UBERON:0000454,1.65e-09,9;UBERON:0009854,4.76e-08,23;UBERON:0009497,2.45e-07,25;UBERON:0000015,2.45e-07,25;UBERON:0002423,2.45e-07,25;UBERON:0006235,2.45e-07,25;UBERON:0004161,2.45e-07,25;UBERON:0009856,4.73e-07,26;UBERON:0002107,4.78e-07,19;UBERON:0006925,4.78e-07,19;UBERON:0008836,4.78e-07,19;UBERON:0003929,8.74e-07,54;UBERON:0000945,9.09e-07,8;UBERON:0010039,9.09e-07,8 | |||
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| ||
|short_description=p14@LMO7 | |||
}} | }} |
Latest revision as of 00:12, 18 September 2015
Short description: | p14@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LMO7_5end |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | 216bp_to_ENST00000465261, NM_015842, uc001vjv.2_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLH4Q8WWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.60e-11 | 12 |
endodermal cell | 1.89e-09 | 58 |
epithelial cell of stomach | 2.64e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.17e-12 | 2 |
adenocarcinoma | 2.12e-07 | 25 |