FFCP PHASE1:Hg19::chr10:33246846..33246855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |EntrezGene=3688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |HGNC=6153 | ||
|TSSclassifier=strong | |||
|UniProt=P05556 | |UniProt=P05556 | ||
|association_with_transcript=-24bp_to_ENST00000396033,NM_133376,uc001iws.3_5end | |association_with_transcript=-24bp_to_ENST00000396033,NM_133376,uc001iws.3_5end | ||
|cluster_id=chr10:33246846..33246855,- | |||
|coexpression_cluster_id=C2058 | |||
|description=CAGE_peak_11_at_ITGB1_5end | |description=CAGE_peak_11_at_ITGB1_5end | ||
|id=chr10:33246846..33246855,- | |id=chr10:33246846..33246855,- | ||
|ontology_enrichment_celltype=CL:0000220!6.93e-16!246;CL:0002321!1.05e-15!248;CL:0000548!2.17e-15!679;CL:0000004!2.17e-15!679;CL:0000255!2.17e-15!679;CL:0000012!3.25e-15!682;CL:0000359!7.37e-14!32;CL:0000066!1.34e-13!254;CL:0000055!5.81e-12!180;CL:0000680!2.83e-11!57;CL:0000056!2.83e-11!57;CL:0000355!2.83e-11!57;CL:0000192!3.56e-11!42;CL:0000514!3.56e-11!42;CL:0000222!1.86e-10!119;CL:0000187!3.23e-10!54;CL:0002371!1.13e-09!591;CL:0000144!1.23e-09!625;CL:0000183!3.32e-09!59;CL:0000003!6.66e-09!722;CL:0000393!9.61e-09!60;CL:0000211!9.61e-09!60 | |ontology_enrichment_celltype=CL:0000220!6.93e-16!246;CL:0002321!1.05e-15!248;CL:0000548!2.17e-15!679;CL:0000004!2.17e-15!679;CL:0000255!2.17e-15!679;CL:0000012!3.25e-15!682;CL:0000359!7.37e-14!32;CL:0000066!1.34e-13!254;CL:0000055!5.81e-12!180;CL:0000680!2.83e-11!57;CL:0000056!2.83e-11!57;CL:0000355!2.83e-11!57;CL:0000192!3.56e-11!42;CL:0000514!3.56e-11!42;CL:0000222!1.86e-10!119;CL:0000187!3.23e-10!54;CL:0002371!1.13e-09!591;CL:0000144!1.23e-09!625;CL:0000183!3.32e-09!59;CL:0000003!6.66e-09!722;CL:0000393!9.61e-09!60;CL:0000211!9.61e-09!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.05e-16;32!CL:0000192;2.35e-09;43!CL:0002539;7.92e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.32e-18,32;CL:0000192,1.84e-12,43;CL:0000514,1.84e-12,43;CL:0000680,8.50e-10,58;CL:0000056,8.50e-10,58;CL:0000355,8.50e-10,58;CL:0000187,7.07e-09,55;CL:0002321,1.20e-08,250;CL:0002539,5.23e-08,10;CL:0000393,6.43e-08,61;CL:0000211,6.43e-08,61;CL:0000222,9.51e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.35e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!4.39e-09!14;DOID:193!3.30e-07!29;DOID:120!4.53e-07!27 | |ontology_enrichment_disease=DOID:2394!4.39e-09!14;DOID:193!3.30e-07!29;DOID:120!4.53e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.51e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.39e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.84e-16!42;UBERON:0003509!2.84e-16!42;UBERON:0004572!2.84e-16!42;UBERON:0004573!1.63e-15!33;UBERON:0004571!1.63e-15!33;UBERON:0002100!1.08e-14!216;UBERON:0002049!1.88e-13!79;UBERON:0007798!1.88e-13!79;UBERON:0005256!6.26e-13!143;UBERON:0000486!6.68e-13!82;UBERON:0001981!1.03e-12!60;UBERON:0007500!1.03e-12!60;UBERON:0004537!1.03e-12!60;UBERON:0006965!1.03e-12!60;UBERON:0000055!2.68e-12!69;UBERON:0003914!4.58e-12!118;UBERON:0000914!5.49e-12!83;UBERON:0002329!5.49e-12!83;UBERON:0003077!5.49e-12!83;UBERON:0003059!5.49e-12!83;UBERON:0007282!5.49e-12!83;UBERON:0009618!5.49e-12!83;UBERON:0007285!5.49e-12!83;UBERON:0000490!6.45e-12!138;UBERON:0004290!2.00e-11!70;UBERON:0003104!5.25e-11!238;UBERON:0009142!5.25e-11!238;UBERON:0001134!1.20e-09!61;UBERON:0002036!1.20e-09!61;UBERON:0003082!1.20e-09!61;UBERON:0000926!4.24e-09!448;UBERON:0004120!4.24e-09!448;UBERON:0006603!4.24e-09!448;UBERON:0004872!6.27e-09!84;UBERON:0000947!8.20e-09!21;UBERON:0010191!8.20e-09!21;UBERON:0002385!9.02e-09!63;UBERON:0001015!9.02e-09!63;UBERON:0000383!9.02e-09!63;UBERON:0004535!1.31e-08!110;UBERON:0001009!4.98e-08!113;UBERON:0000480!1.01e-07!626;UBERON:0000467!1.11e-07!625;UBERON:0000992!4.36e-07!13;UBERON:0000468!9.11e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.63e-19;33!UBERON:0004571;4.63e-19;33!UBERON:0001637;5.15e-13;42!UBERON:0003509;5.15e-13;42!UBERON:0004572;5.15e-13;42!UBERON:0000947;5.41e-10;21!UBERON:0010191;5.41e-10;21!UBERON:0007500;2.34e-08;56!UBERON:0001981;2.34e-08;56!UBERON:0004537;2.34e-08;56!UBERON:0004237;7.92e-08;10!UBERON:0004695;7.92e-08;10!UBERON:0002111;7.92e-08;10!UBERON:0004178;7.92e-08;10!UBERON:0003914;1.22e-07;74!UBERON:0000992;1.84e-07;13 | |||
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| ||
|short_description=p11@ITGB1 | |short_description=p11@ITGB1 | ||
}} | }} |
Latest revision as of 00:35, 18 September 2015
Short description: | p11@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ITGB1_5end |
Coexpression cluster: | C2058_Smooth_basal_mesenchymal_tubular_Renal_lung_Urothelial |
Association with transcript: | -24bp_to_ENST00000396033, NM_133376, uc001iws.3_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.32e-18 | 32 |
smooth muscle cell | 1.84e-12 | 43 |
smooth muscle myoblast | 1.84e-12 | 43 |
muscle precursor cell | 8.50e-10 | 58 |
myoblast | 8.50e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.50e-10 | 58 |
muscle cell | 7.07e-09 | 55 |
embryonic cell | 1.20e-08 | 250 |
aortic smooth muscle cell | 5.23e-08 | 10 |
electrically responsive cell | 6.43e-08 | 61 |
electrically active cell | 6.43e-08 | 61 |
mesodermal cell | 9.51e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.39e-11 | 14 |