FFCP PHASE1:Hg19::chr6:31836976..31837017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80736 | |EntrezGene=80736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13941 | |HGNC=13941 | ||
|TSSclassifier=strong | |||
|UniProt=Q53GD3 | |UniProt=Q53GD3 | ||
|association_with_transcript=-3bp_to_AY358457_5end | |association_with_transcript=-3bp_to_AY358457_5end | ||
|cluster_id=chr6:31836976..31837017,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_2_at_SLC44A4_5end | |description=CAGE_peak_2_at_SLC44A4_5end | ||
|id=chr6:31836976..31837017,- | |id=chr6:31836976..31837017,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.67e-27;2!UBERON:0006242;5.80e-15;1!UBERON:0001045;1.97e-14;1!UBERON:0005754;1.97e-14;1 | |||
|ontology_enrichment_disease=DOID:3493!9.77e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-15!115;UBERON:0006947!5.90e-13!3;UBERON:0004054!5.90e-13!3;UBERON:0005409!1.39e-11!35;UBERON:0000160!1.69e-10!27;UBERON:0005904!7.99e-10!4;UBERON:0004921!1.59e-09!129;UBERON:0004185!1.59e-09!129;UBERON:0000059!1.86e-09!11;UBERON:0003127!2.51e-09!2;UBERON:0001007!6.67e-09!155;UBERON:0001555!6.67e-09!155;UBERON:0007026!6.67e-09!155;UBERON:0003135!7.17e-09!11;UBERON:0004119!1.48e-08!169;UBERON:0000925!1.48e-08!169;UBERON:0006595!1.48e-08!169;UBERON:0003101!6.65e-08!22;UBERON:0000079!6.65e-08!22;UBERON:0001155!8.89e-08!9 | |ontology_enrichment_uberon=UBERON:0007023!1.77e-15!115;UBERON:0006947!5.90e-13!3;UBERON:0004054!5.90e-13!3;UBERON:0005409!1.39e-11!35;UBERON:0000160!1.69e-10!27;UBERON:0005904!7.99e-10!4;UBERON:0004921!1.59e-09!129;UBERON:0004185!1.59e-09!129;UBERON:0000059!1.86e-09!11;UBERON:0003127!2.51e-09!2;UBERON:0001007!6.67e-09!155;UBERON:0001555!6.67e-09!155;UBERON:0007026!6.67e-09!155;UBERON:0003135!7.17e-09!11;UBERON:0004119!1.48e-08!169;UBERON:0000925!1.48e-08!169;UBERON:0006595!1.48e-08!169;UBERON:0003101!6.65e-08!22;UBERON:0000079!6.65e-08!22;UBERON:0001155!8.89e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.81e-36;17!UBERON:0005409;6.92e-28;22!UBERON:0002108;1.25e-24;4!UBERON:0001155;4.69e-24;9!UBERON:0000059;9.44e-20;11!UBERON:0006947;2.12e-18;3!UBERON:0004054;2.12e-18;3!UBERON:0004921;5.86e-17;33!UBERON:0001154;1.97e-14;1!UBERON:0000998;1.97e-14;1!UBERON:0001301;1.97e-14;1!UBERON:0001153;1.97e-14;1!UBERON:0002171;1.97e-14;1!UBERON:0006868;1.97e-14;1!UBERON:0009854;1.97e-14;1!UBERON:0006518;1.97e-14;1!UBERON:0008949;1.97e-14;1!UBERON:0000101;1.97e-14;1!UBERON:0002167;1.97e-14;1!UBERON:0005904;4.70e-14;4!UBERON:0003127;4.68e-08;2!UBERON:0000341;7.27e-08;2!UBERON:0001555;3.59e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.38e-36,17;UBERON:0002108,9.41e-25,4;UBERON:0005409,1.04e-24,25;UBERON:0001155,4.17e-24,9;UBERON:0000059,8.57e-20,11;UBERON:0006947,1.48e-18,3;UBERON:0004054,1.48e-18,3;UBERON:0001301,1.41e-14,1;UBERON:0000998,1.61e-14,1;UBERON:0006868,1.61e-14,1;UBERON:0001154,1.84e-14,1;UBERON:0001153,1.84e-14,1;UBERON:0001045,1.84e-14,1;UBERON:0002171,2.11e-14,1;UBERON:0006518,2.11e-14,1;UBERON:0008949,2.11e-14,1;UBERON:0000101,2.11e-14,1;UBERON:0002167,2.11e-14,1;UBERON:0005904,3.61e-14,4;UBERON:0007023,8.30e-13,114;UBERON:0004921,4.54e-10,118;UBERON:0001007,8.75e-10,145;UBERON:0001555,8.75e-10,145;UBERON:0007026,8.75e-10,145;UBERON:0004119,9.56e-09,160;UBERON:0000925,9.56e-09,160;UBERON:0006595,9.56e-09,160;UBERON:0003127,5.02e-08,2;UBERON:0000341,9.19e-08,2;UBERON:0000080,8.59e-07,9;UBERON:0002120,8.59e-07,9;UBERON:0004875,8.59e-07,9;UBERON:0005721,8.59e-07,9;UBERON:0005754,8.59e-07,9;UBERON:0007297,8.59e-07,9 | |||
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| ||
|short_description=p2@SLC44A4 | |short_description=p2@SLC44A4 | ||
}} | }} |
Latest revision as of 00:47, 18 September 2015
Short description: | p2@SLC44A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC44A4_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -3bp_to_AY358457_5end |
EntrezGene: | SLC44A4 |
HGNC: | 13941 |
UniProt: | Q53GD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.38e-36 | 17 |
small intestine | 9.41e-25 | 4 |
gastrointestinal system | 1.04e-24 | 25 |
colon | 4.17e-24 | 9 |
large intestine | 8.57e-20 | 11 |
male genital duct | 1.48e-18 | 3 |
internal male genitalia | 1.48e-18 | 3 |
epididymis | 1.41e-14 | 1 |
seminal vesicle | 1.61e-14 | 1 |
seminal fluid secreting gland | 1.61e-14 | 1 |
vermiform appendix | 1.84e-14 | 1 |
caecum | 1.84e-14 | 1 |
midgut | 1.84e-14 | 1 |
lower lobe of right lung | 2.11e-14 | 1 |
right lung lobe | 2.11e-14 | 1 |
lower lobe of lung | 2.11e-14 | 1 |
lobe of lung | 2.11e-14 | 1 |
right lung | 2.11e-14 | 1 |
duct of male reproductive system | 3.61e-14 | 4 |
adult organism | 8.30e-13 | 114 |
subdivision of digestive tract | 4.54e-10 | 118 |
digestive system | 8.75e-10 | 145 |
digestive tract | 8.75e-10 | 145 |
primitive gut | 8.75e-10 | 145 |
endoderm-derived structure | 9.56e-09 | 160 |
endoderm | 9.56e-09 | 160 |
presumptive endoderm | 9.56e-09 | 160 |
open tracheal system trachea | 5.02e-08 | 2 |
throat | 9.19e-08 | 2 |
mesonephros | 8.59e-07 | 9 |
pronephros | 8.59e-07 | 9 |
nephrogenic cord | 8.59e-07 | 9 |
pronephric mesoderm | 8.59e-07 | 9 |
rostral part of nephrogenic cord | 8.59e-07 | 9 |
presumptive pronephric mesoderm | 8.59e-07 | 9 |