FFCP PHASE1:Hg19::chr6:31895467..31895479,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=717,629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1248,1037 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6L6,B4E1Z4 | |||
|association_with_transcript=0bp_to_ENST00000418949,ENST00000456570,ENST00000556679_5end | |||
|cluster_id=chr6:31895467..31895479,+ | |||
|coexpression_cluster_id=C2173 | |||
|description=CAGE_peak_4_at_C2_5end,CAGE_peak_6_at_CFB_5end | |||
|id=chr6:31895467..31895479,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.78e-22!63;CL:0000576!1.78e-22!63;CL:0000040!1.78e-22!63;CL:0000559!1.78e-22!63;CL:0000839!7.87e-22!70;CL:0000557!3.01e-21!71;CL:0002009!3.29e-21!65;CL:0000766!1.66e-19!76;CL:0002057!1.26e-18!42;CL:0000860!1.78e-16!45;CL:0000763!5.71e-10!112;CL:0000049!5.71e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.75e-14;12!CL:0000235;4.63e-14;6!CL:0000473;3.98e-12;39!CL:0000234;3.98e-12;39!CL:0002619;1.28e-08;3!CL:0000576;9.55e-08;48!CL:0000860;3.02e-07;33!CL:0002057;3.02e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.41e-21,59;CL:0000576,7.41e-21,59;CL:0000040,7.41e-21,59;CL:0000559,7.41e-21,59;CL:0002009,6.33e-20,61;CL:0000839,7.58e-18,66;CL:0000557,1.81e-17,67;CL:0000766,9.70e-16,72;CL:0000473,1.51e-15,48;CL:0000234,1.51e-15,48;CL:0000182,2.90e-14,12;CL:0000235,5.81e-14,6;CL:0000763,5.39e-09,108;CL:0000049,5.39e-09,108;CL:0002619,1.29e-08,3;CL:0000860,1.51e-08,42;CL:0002057,1.51e-08,42;CL:0002087,4.53e-08,115;CL:0002031,1.87e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.94e-12;11!UBERON:0009497;2.83e-10;13!CL:0002057;1.11e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.30e-26!115;UBERON:0002371!3.23e-21!80;UBERON:0001474!4.22e-19!86;UBERON:0007023!4.73e-19!115;UBERON:0002390!1.26e-17!102;UBERON:0003061!1.26e-17!102;UBERON:0004765!1.71e-17!101;UBERON:0001434!1.71e-17!101;UBERON:0002193!2.90e-17!112;UBERON:0000062!3.27e-12!511;UBERON:0002204!1.50e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.10e-13;19!UBERON:0006925;5.10e-13;19!UBERON:0002423;3.03e-09;25!UBERON:0002365;7.22e-07;31!UBERON:0002330;7.22e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,9.75e-19,93;UBERON:0002371,1.03e-18,76;UBERON:0001474,9.81e-17,82;UBERON:0001434,1.26e-15,100;UBERON:0002390,6.44e-15,98;UBERON:0003061,6.44e-15,98;UBERON:0002193,7.72e-15,108;UBERON:0004765,1.62e-14,90;UBERON:0002107,7.49e-13,19;UBERON:0006925,7.49e-13,19;UBERON:0008836,7.49e-13,19;UBERON:0009854,6.46e-12,23;UBERON:0008835,9.92e-11,22;UBERON:0003894,9.92e-11,22;UBERON:0009856,3.37e-10,26;UBERON:0007499,3.99e-09,25;UBERON:0009497,3.99e-09,25;UBERON:0000015,3.99e-09,25;UBERON:0002423,3.99e-09,25;UBERON:0006235,3.99e-09,25;UBERON:0004161,3.99e-09,25;UBERON:0002204,3.03e-07,167;UBERON:0002365,7.16e-07,31;UBERON:0002330,7.16e-07,31;UBERON:0007023,8.16e-07,114 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,51.7244745494225,17.8141516310439,34.7727016306152,0.726991193897824,0,0.242584061187816,1.85943229524548,0.822335776043652,0.309706370895104,2.3015391385772,0.512321413058201,1.89185783910868,0.689491361473237,1.29096936716765,2.70852973188684,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0.641858054152187,1.27867425159808,0.989553900560148,1.79517291859469,0.426224750532694,2.03146467040009,1.13477044938228,0.622822248995575,1.7587406567972,0,1.08594422352558,3.02699751316684,1.10483290796269,0.316462387440884,0.633765858935825,1.70083439972035,1.04829322754188,0.112328631146495,0,0.16072558669708,1.71007646244749,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,1.01392563272577,0,1.94653948121054,0,0,0,1.83370705696798,0,0,2.92092654289215,3.13433527138681,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,1.18800285728205,1.23633464639278,0,0.718618141816238,0,0,0,0.438977620880838,0,1.35214253015937,0,0,0,0.423863802319124,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,16.478154526838,18.6737171168749,24.2223861739376,0,4.30459534900897,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,9.3562462313211,1.17002132569619,3.71577905721821,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,2.70308752059526,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0.299918973546171,4.86495122564762,8.53837055434615,4.21667878966063,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0.36807447515742,0,0.271265023699736,1.24782516918484,0.356857977594324,0.630809660135739,0.819989904948992,0,0,0,0,0,0.173767228936166,0.587403472388222,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0.483437798366489,0,0,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2314702696017,0,0,0,0,0,0.193341436584244,0,0.307007349452259,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,2.74439925886963,3.95153871551882,0,0,0,0,0,10.9206808901064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,2.81974010175699,0.748562161632879,3.95572084034114,0,0.111443384277478,0,0.71623345421307,0,0,0.994147647766298,0.140669416410513,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,0.511572370226872,1.97286811273867,0,0,0,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0.538545866458633,0,3.50901275705111,0.457987967009312,3.19820865611181,0,0,0.332423363800313,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,2.4768118060935,1.22206028986725,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,5.7499787461924,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.16386819786103,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0.640358984218058,0.39961921916426,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0.684526894459965,0,0,0,0.558564802544508,0,1.43574604915363,0.399358000997982,0.858452096273142,0.669514372325618,0.201550417460179,0,1.16495949527454,3.62402638613229,4.78011978610765,4.17901971895946,1.18112977817699,0,0,0,0,0,0,0,0,0.121499113316049,0,4.72834243795189,0.472091293214983,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0.79318464064088,28.5776855672261,14.5757577803443,0.129282956361551,0.13223260174269,0,0,5.01900839068165,0.471612915298998,13.6698888264575,2.97699613087171,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0,0,0,0.122026264901963,0,0,0.443716206147409,0.869349641179368,0,0,0,0,0,0,0,0.149254802886874,0,0,0.947015026375446,1.25783950876288,2.66943366478961,0.457680136793847,0.907385542579434,0,0,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,1.80309130796662,3.42724690951916,0,0.181848659202559,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,1.2288645437686,0,0,0,6.37195424745018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.449604575675217,0,0.159633859057151,0.205116364240755,0.252071696221718,0.414943514785307,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.8273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| |||
|short_description=p4@C2,p6@CFB | |||
}} |
Latest revision as of 00:55, 18 September 2015
Short description: | p4@C2, p6@CFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C2_5end, CAGE_peak_6_at_CFB_5end |
Coexpression cluster: | C2173_CD14_Hepatocyte_liver_Monocytederived_Macrophage_myeloma_lung |
Association with transcript: | 0bp_to_ENST00000418949, ENST00000456570, ENST00000556679_5end |
EntrezGene: | 717,629 |
HGNC: | 1037&submit=Submit 1248, 1037 |
UniProt: | Q8N6L6B4E1Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.41e-21 | 59 |
monocyte | 7.41e-21 | 59 |
monoblast | 7.41e-21 | 59 |
promonocyte | 7.41e-21 | 59 |
macrophage dendritic cell progenitor | 6.33e-20 | 61 |
myeloid lineage restricted progenitor cell | 7.58e-18 | 66 |
granulocyte monocyte progenitor cell | 1.81e-17 | 67 |
myeloid leukocyte | 9.70e-16 | 72 |
defensive cell | 1.51e-15 | 48 |
phagocyte | 1.51e-15 | 48 |
hepatocyte | 2.90e-14 | 12 |
macrophage | 5.81e-14 | 6 |
myeloid cell | 5.39e-09 | 108 |
common myeloid progenitor | 5.39e-09 | 108 |
adult endothelial progenitor cell | 1.29e-08 | 3 |
classical monocyte | 1.51e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-08 | 42 |
nongranular leukocyte | 4.53e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
immune system | 9.75e-19 | 93 |
bone marrow | 1.03e-18 | 76 |
bone element | 9.81e-17 | 82 |
skeletal system | 1.26e-15 | 100 |
hematopoietic system | 6.44e-15 | 98 |
blood island | 6.44e-15 | 98 |
hemolymphoid system | 7.72e-15 | 108 |
skeletal element | 1.62e-14 | 90 |
liver | 7.49e-13 | 19 |
digestive gland | 7.49e-13 | 19 |
liver bud | 7.49e-13 | 19 |
digestive tract diverticulum | 6.46e-12 | 23 |
hepatic diverticulum | 9.92e-11 | 22 |
liver primordium | 9.92e-11 | 22 |
sac | 3.37e-10 | 26 |
epithelial sac | 3.99e-09 | 25 |
epithelium of foregut-midgut junction | 3.99e-09 | 25 |
anatomical boundary | 3.99e-09 | 25 |
hepatobiliary system | 3.99e-09 | 25 |
foregut-midgut junction | 3.99e-09 | 25 |
septum transversum | 3.99e-09 | 25 |
musculoskeletal system | 3.03e-07 | 167 |
exocrine gland | 7.16e-07 | 31 |
exocrine system | 7.16e-07 | 31 |
adult organism | 8.16e-07 | 114 |