FFCP PHASE1:Hg19::chr6:32146268..32146280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6048 | |EntrezGene=6048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10068 | |HGNC=10068 | ||
|TSSclassifier=strong | |||
|UniProt=E7EM95 | |UniProt=E7EM95 | ||
|association_with_transcript=0bp_to_ENST00000427134_5end | |association_with_transcript=0bp_to_ENST00000427134_5end | ||
|cluster_id=chr6:32146268..32146280,+ | |||
|coexpression_cluster_id=C600 | |coexpression_cluster_id=C600 | ||
|description=CAGE_peak_2_at_RNF5_5end | |description=CAGE_peak_2_at_RNF5_5end | ||
|id=chr6:32146268..32146280,+ | |id=chr6:32146268..32146280,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.76e-23!42;CL:0000763!3.09e-21!112;CL:0000049!3.09e-21!112;CL:0000860!6.27e-21!45;CL:0000839!1.30e-20!70;CL:0000557!5.20e-20!71;CL:0000766!2.39e-18!76;CL:0002009!2.18e-17!65;CL:0000037!3.50e-17!172;CL:0000566!3.50e-17!172;CL:0002032!2.78e-16!165;CL:0000837!2.78e-16!165;CL:0000738!3.57e-16!140;CL:0002194!1.56e-15!63;CL:0000576!1.56e-15!63;CL:0000040!1.56e-15!63;CL:0000559!1.56e-15!63;CL:0002031!3.02e-15!124;CL:0000988!3.35e-15!182;CL:0002087!1.67e-09!119;CL:0000453!1.41e-08!5 | |ontology_enrichment_celltype=CL:0002057!3.76e-23!42;CL:0000763!3.09e-21!112;CL:0000049!3.09e-21!112;CL:0000860!6.27e-21!45;CL:0000839!1.30e-20!70;CL:0000557!5.20e-20!71;CL:0000766!2.39e-18!76;CL:0002009!2.18e-17!65;CL:0000037!3.50e-17!172;CL:0000566!3.50e-17!172;CL:0002032!2.78e-16!165;CL:0000837!2.78e-16!165;CL:0000738!3.57e-16!140;CL:0002194!1.56e-15!63;CL:0000576!1.56e-15!63;CL:0000040!1.56e-15!63;CL:0000559!1.56e-15!63;CL:0002031!3.02e-15!124;CL:0000988!3.35e-15!182;CL:0002087!1.67e-09!119;CL:0000453!1.41e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.36e-12;5!CL:0000451;2.04e-07;10!CL:0000097;5.56e-07;5!CL:0000875;5.96e-07;3!CL:0002396;5.96e-07;3!CL:0000990;9.29e-07;8!CL:0000766;9.58e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.54e-13,108;CL:0000049,1.54e-13,108;CL:0000453,1.28e-12,5;CL:0000839,2.84e-12,66;CL:0000557,7.17e-12,67;CL:0000473,8.77e-10,48;CL:0000234,8.77e-10,48;CL:0002009,9.54e-09,61;CL:0000766,1.97e-08,72;CL:0002393,5.47e-08,9;CL:0002397,5.47e-08,9;CL:0000037,1.18e-07,168;CL:0000860,1.54e-07,42;CL:0002057,1.54e-07,42;CL:0000451,2.42e-07,10;CL:0000097,2.67e-07,5;CL:0002028,2.67e-07,5;CL:0002032,4.73e-07,161;CL:0000837,4.73e-07,161;CL:0002194,5.34e-07,59;CL:0000576,5.34e-07,59;CL:0000040,5.34e-07,59;CL:0000559,5.34e-07,59;CL:0000875,5.64e-07,3;CL:0002396,5.64e-07,3;CL:0000988,7.49e-07,177;CL:0000990,8.99e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.45e-19!80;UBERON:0001474!1.19e-16!86;UBERON:0004765!4.28e-15!101;UBERON:0001434!4.28e-15!101;UBERON:0001737!1.50e-14!9;UBERON:0002390!3.98e-12!102;UBERON:0003061!3.98e-12!102;UBERON:0002193!1.38e-11!112;UBERON:0002405!5.69e-11!115;UBERON:0002204!1.47e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!7.45e-19!80;UBERON:0001474!1.19e-16!86;UBERON:0004765!4.28e-15!101;UBERON:0001434!4.28e-15!101;UBERON:0001737!1.50e-14!9;UBERON:0002390!3.98e-12!102;UBERON:0003061!3.98e-12!102;UBERON:0002193!1.38e-11!112;UBERON:0002405!5.69e-11!115;UBERON:0002204!1.47e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.69e-22;9!UBERON:0001557;4.69e-22;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.95e-22,9;UBERON:0002371,4.72e-12,76;UBERON:0004765,3.70e-11,90;UBERON:0001474,1.05e-10,82;UBERON:0002405,1.43e-10,93;UBERON:0001434,2.28e-09,100;UBERON:0001557,2.55e-09,19;UBERON:0002193,3.47e-08,108;UBERON:0002390,5.85e-08,98;UBERON:0003061,5.85e-08,98;UBERON:0002204,3.54e-07,167 | |||
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| ||
|short_description=p2@RNF5 | |short_description=p2@RNF5 | ||
}} | }} |
Latest revision as of 01:59, 18 September 2015
Short description: | p2@RNF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF5_5end |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | 0bp_to_ENST00000427134_5end |
EntrezGene: | RNF5 |
HGNC: | 10068 |
UniProt: | E7EM95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.54e-13 | 108 |
common myeloid progenitor | 1.54e-13 | 108 |
Langerhans cell | 1.28e-12 | 5 |
myeloid lineage restricted progenitor cell | 2.84e-12 | 66 |
granulocyte monocyte progenitor cell | 7.17e-12 | 67 |
defensive cell | 8.77e-10 | 48 |
phagocyte | 8.77e-10 | 48 |
macrophage dendritic cell progenitor | 9.54e-09 | 61 |
myeloid leukocyte | 1.97e-08 | 72 |
intermediate monocyte | 5.47e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.47e-08 | 9 |
hematopoietic stem cell | 1.18e-07 | 168 |
classical monocyte | 1.54e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-07 | 42 |
dendritic cell | 2.42e-07 | 10 |
mast cell | 2.67e-07 | 5 |
basophil mast progenitor cell | 2.67e-07 | 5 |
hematopoietic oligopotent progenitor cell | 4.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.73e-07 | 161 |
monopoietic cell | 5.34e-07 | 59 |
monocyte | 5.34e-07 | 59 |
monoblast | 5.34e-07 | 59 |
promonocyte | 5.34e-07 | 59 |
non-classical monocyte | 5.64e-07 | 3 |
CD14-low, CD16-positive monocyte | 5.64e-07 | 3 |
hematopoietic cell | 7.49e-07 | 177 |
conventional dendritic cell | 8.99e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.95e-22 | 9 |
bone marrow | 4.72e-12 | 76 |
skeletal element | 3.70e-11 | 90 |
bone element | 1.05e-10 | 82 |
immune system | 1.43e-10 | 93 |
skeletal system | 2.28e-09 | 100 |
upper respiratory tract | 2.55e-09 | 19 |
hemolymphoid system | 3.47e-08 | 108 |
hematopoietic system | 5.85e-08 | 98 |
blood island | 5.85e-08 | 98 |
musculoskeletal system | 3.54e-07 | 167 |