FFCP PHASE1:Hg19::chr17:77813257..77813290,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8535 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1554 | |||
|TSSclassifier=strong | |||
|UniProt=O00257 | |||
|association_with_transcript=-29bp_to_ENST00000269397_5end | |||
|cluster_id=chr17:77813257..77813290,- | |||
|description=CAGE_peak_2_at_CBX4_5end | |||
|id=chr17:77813257..77813290,- | |||
|ontology_enrichment_celltype=CL:0000791!2.33e-09!18;CL:0000789!2.33e-09!18;CL:0002420!2.33e-09!18;CL:0002419!2.33e-09!18;CL:0000790!2.33e-09!18;CL:0000084!3.10e-07!25;CL:0000827!3.10e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.90e-09;18!CL:0000789;2.90e-09;18!CL:0002419;2.90e-09;18!CL:0000084;3.59e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.33e-09,18;CL:0000789,2.33e-09,18;CL:0002420,2.33e-09,18;CL:0002419,2.33e-09,18;CL:0000790,2.33e-09,18;CL:0000084,3.10e-07,25;CL:0000827,3.10e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!9.60e-09!22;UBERON:0001950!2.05e-08!20;UBERON:0001869!9.05e-08!32;UBERON:0002780!2.75e-07!41;UBERON:0001890!2.75e-07!41;UBERON:0006240!2.75e-07!41;UBERON:0001893!6.10e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-08;22!UBERON:0001950;2.23e-08;20!UBERON:0001869;2.88e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.60e-09,22;UBERON:0001950,2.05e-08,20;UBERON:0001869,9.05e-08,32;UBERON:0002780,2.75e-07,41;UBERON:0001890,2.75e-07,41;UBERON:0003080,2.75e-07,41;UBERON:0006240,2.75e-07,41;UBERON:0000073,5.45e-07,53;UBERON:0002616,5.45e-07,53;UBERON:0001893,6.10e-07,34 | |||
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| |||
|short_description=p2@CBX4 | |||
}} |
Latest revision as of 02:35, 18 September 2015
Short description: | p2@CBX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CBX4_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000269397_5end |
EntrezGene: | CBX4 |
HGNC: | 1554 |
UniProt: | O00257 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.33e-09 | 18 |
alpha-beta T cell | 2.33e-09 | 18 |
immature T cell | 2.33e-09 | 18 |
mature T cell | 2.33e-09 | 18 |
immature alpha-beta T cell | 2.33e-09 | 18 |
T cell | 3.10e-07 | 25 |
pro-T cell | 3.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 9.60e-09 | 22 |
neocortex | 2.05e-08 | 20 |
cerebral hemisphere | 9.05e-08 | 32 |
regional part of forebrain | 2.75e-07 | 41 |
forebrain | 2.75e-07 | 41 |
anterior neural tube | 2.75e-07 | 41 |
future forebrain | 2.75e-07 | 41 |
regional part of nervous system | 5.45e-07 | 53 |
regional part of brain | 5.45e-07 | 53 |
telencephalon | 6.10e-07 | 34 |