FFCP PHASE2:Hg19::chr6:32610515..32610535,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3117 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:4942 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=4942 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 03:35, 18 September 2015
| Short description: | p16@HLA-DQA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_16_at_HLA-DQA1_5end |
| Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
| Association with transcript: | 128bp_to_uc003obu.2_5end |
| EntrezGene: | HLA-DQA1 |
| HGNC: | 4942 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p16@HLA-DQA1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Langerhans cell | 2.46e-63 | 5 |
| conventional dendritic cell | 2.83e-35 | 8 |
| dendritic cell | 6.96e-29 | 10 |
| CD1a-positive Langerhans cell | 1.67e-26 | 2 |
| immature CD1a-positive Langerhans cell | 1.67e-26 | 2 |
| leukocyte | 3.81e-16 | 136 |
| macrophage dendritic cell progenitor | 3.16e-15 | 61 |
| myeloid cell | 5.05e-15 | 108 |
| common myeloid progenitor | 5.05e-15 | 108 |
| granulocyte monocyte progenitor cell | 8.52e-14 | 67 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 4.58e-12 | 76 |
| hematopoietic system | 2.29e-11 | 98 |
| blood island | 2.29e-11 | 98 |
| bone element | 4.05e-11 | 82 |
| hemolymphoid system | 3.28e-10 | 108 |
| skeletal element | 4.74e-10 | 90 |
| immune system | 1.07e-09 | 93 |
| skeletal system | 5.96e-09 | 100 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| genetic disease | 1.10e-13 | 1 |
| monogenic disease | 1.10e-13 | 1 |
| xeroderma pigmentosum | 1.10e-13 | 1 |
Showing 1 to 3 of 3 entries
