FFCP PHASE1:Hg19::chr7:29237372..29237375,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z1W9 | |UniProt=B7Z1W9 | ||
|association_with_transcript=15bp_to_ENST00000546235,uc011jzu.1_5end | |association_with_transcript=15bp_to_ENST00000546235,uc011jzu.1_5end | ||
|cluster_id=chr7:29237372..29237375,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_51_at_CHN2_5end | |description=CAGE_peak_51_at_CHN2_5end | ||
|id=chr7:29237372..29237375,+ | |id=chr7:29237372..29237375,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!4.90e-38!6;UBERON:0006215!4.90e-38!6;UBERON:0002680!1.17e-25!9;UBERON:0001895!1.17e-25!9;UBERON:0010092!1.17e-25!9;UBERON:0007190!1.26e-25!1;UBERON:0004733!1.87e-19!12;UBERON:0002028!1.87e-19!12;UBERON:0007277!1.87e-19!12;UBERON:0004732!5.11e-18!13;UBERON:0003076!1.02e-15!15;UBERON:0003057!1.02e-15!15;UBERON:0001049!1.70e-15!57;UBERON:0005068!1.70e-15!57;UBERON:0006241!1.70e-15!57;UBERON:0007135!1.70e-15!57;UBERON:0002616!5.51e-15!59;UBERON:0001954!1.37e-13!2;UBERON:0003022!1.37e-13!2;UBERON:0002421!1.37e-13!2;UBERON:0002600!1.37e-13!2;UBERON:0000955!1.10e-12!69;UBERON:0006238!1.10e-12!69;UBERON:0001017!9.77e-11!82;UBERON:0003075!2.28e-10!86;UBERON:0007284!2.28e-10!86;UBERON:0005743!2.98e-10!86;UBERON:0002346!6.47e-10!90;UBERON:0000073!2.64e-09!94;UBERON:0001016!2.64e-09!94;UBERON:0001869!2.26e-07!32;UBERON:0000033!3.19e-07!123;UBERON:0001893!5.53e-07!34;UBERON:0000153!6.86e-07!129;UBERON:0007811!6.86e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p51@CHN2 | |short_description=p51@CHN2 | ||
}} | }} |
Latest revision as of 04:10, 18 September 2015
Short description: | p51@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_CHN2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 15bp_to_ENST00000546235, uc011jzu.1_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | B7Z1W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |